RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-208	ENST00000467722	SENP3-EIF4A1	A0A087X0R7	540 aa		34.05	■■■■□ 3.04
SPECC1-208	ENST00000467722	MAP3K19	Q56UN5	1328 aa		34.04	■■■■□ 3.04
SPECC1-208	ENST00000467722	PRIM1	P49642	420 aa	Known RBP	34.04	■■■■□ 3.04
SPECC1-208	ENST00000467722	KCNQ4	P56696	695 aa		34.04	■■■■□ 3.04
SPECC1-208	ENST00000467722	TFCP2L1	Q9NZI6	479 aa		34.04	■■■■□ 3.04
SPECC1-208	ENST00000467722	CEP350	Q5VT06	3117 aa		34.04	■■■■□ 3.04
SPECC1-208	ENST00000467722	HOXC9	P31274	260 aa		34.02	■■■■□ 3.04
SPECC1-208	ENST00000467722	KLHL34	Q8N239	644 aa		34.02	■■■■□ 3.04
SPECC1-208	ENST00000467722	SYTL4	Q96C24	671 aa	Predicted RBP	34.02	■■■■□ 3.04
SPECC1-208	ENST00000467722	NLGN2	Q8NFZ4	835 aa		33.99	■■■■□ 3.03
SPECC1-208	ENST00000467722	COG3	Q96JB2	828 aa		33.99	■■■■□ 3.03
SPECC1-208	ENST00000467722	C5	P01031	1676 aa		33.98	■■■■□ 3.03
SPECC1-208	ENST00000467722	ZCRB1	Q8TBF4	217 aa	Known RBP	33.97	■■■■□ 3.03
SPECC1-208	ENST00000467722	RTL1	A6NKG5	1358 aa		33.97	■■■■□ 3.03
SPECC1-208	ENST00000467722	TESK2	Q96S53	571 aa		33.96	■■■■□ 3.03
SPECC1-208	ENST00000467722	TAF1L	Q8IZX4	1826 aa		33.95	■■■■□ 3.02
SPECC1-208	ENST00000467722	FBLN1	P23142	703 aa		33.94	■■■■□ 3.02
SPECC1-208	ENST00000467722	AMPH	P49418	695 aa		33.94	■■■■□ 3.02
SPECC1-208	ENST00000467722	PELP1	Q8IZL8	1130 aa	Known RBP	33.94	■■■■□ 3.02
SPECC1-208	ENST00000467722	CCNL1	Q9UK58	526 aa	Predicted RBP	33.94	■■■■□ 3.02
SPECC1-208	ENST00000467722	TONSL	Q96HA7	1378 aa		33.91	■■■■□ 3.02
SPECC1-208	ENST00000467722	GIGYF1	O75420	1035 aa	Predicted RBP	33.91	■■■■□ 3.02
SPECC1-208	ENST00000467722	USP47	Q96K76	1375 aa		33.9	■■■■□ 3.02
SPECC1-208	ENST00000467722	CGNL1	Q0VF96	1302 aa		33.88	■■■■□ 3.01
SPECC1-208	ENST00000467722	COL23A1	Q86Y22	540 aa	Predicted RBP	33.88	■■■■□ 3.01
SPECC1-208	ENST00000467722	YBX3	P16989	372 aa	Known RBP eCLIP	33.87	■■■■□ 3.01	2e-6	■■■□□ 18.3
SPECC1-208	ENST00000467722	NBPF6	Q5VWK0	638 aa		33.87	■■■■□ 3.01
SPECC1-208	ENST00000467722	NBPF4	Q96M43	638 aa		33.87	■■■■□ 3.01
SPECC1-208	ENST00000467722	KIF20B	Q96Q89	1820 aa		33.86	■■■■□ 3.01
SPECC1-208	ENST00000467722	ST20-MTHFS	A0A0A6YYL1	179 aa		33.86	■■■■□ 3.01
SPECC1-208	ENST00000467722	ITGB4	P16144	1822 aa		33.84	■■■■□ 3.01
SPECC1-208	ENST00000467722	RRS1	Q15050	365 aa	Known RBP	33.84	■■■■□ 3.01
SPECC1-208	ENST00000467722	SMG6	Q86US8	1419 aa	Known RBP	33.84	■■■■□ 3.01
SPECC1-208	ENST00000467722	TOGARAM1	Q9Y4F4	1720 aa		33.84	■■■■□ 3.01
SPECC1-208	ENST00000467722	GRIN3B	O60391	1043 aa		33.83	■■■■□ 3.01
SPECC1-208	ENST00000467722	MSH5	O43196	834 aa		33.82	■■■■□ 3
SPECC1-208	ENST00000467722	USHBP1	Q8N6Y0	703 aa		33.82	■■■■□ 3
SPECC1-208	ENST00000467722	SLC24A1	O60721	1099 aa		33.8	■■■■□ 3
SPECC1-208	ENST00000467722	RAPGEF4	Q8WZA2	1011 aa		33.8	■■■■□ 3
SPECC1-208	ENST00000467722	C4B	P0C0L5	1744 aa		33.79	■■■■□ 3
SPECC1-208	ENST00000467722	PKD1L3	Q7Z443	1732 aa		33.79	■■■■□ 3
SPECC1-208	ENST00000467722	FYB1	O15117	783 aa		33.79	■■■■□ 3
SPECC1-208	ENST00000467722	MSL1	Q68DK7	614 aa		33.79	■■■■□ 3
SPECC1-208	ENST00000467722	UBR3	Q6ZT12	1888 aa		33.78	■■■■□ 3
SPECC1-208	ENST00000467722	INSR	P06213	1382 aa		33.77	■■■■□ 3
SPECC1-208	ENST00000467722	GGNBP2	Q9H3C7	697 aa		33.77	■■■■□ 3
SPECC1-208	ENST00000467722	PCDH11X	Q9BZA7	1347 aa		33.77	■■■■□ 3
SPECC1-208	ENST00000467722	PCDH11Y	Q9BZA8	1340 aa		33.77	■■■■□ 3
SPECC1-208	ENST00000467722	PALLD	Q8WX93	1383 aa		33.76	■■■■□ 3
SPECC1-208	ENST00000467722	TAT	P17735	454 aa	Predicted RBP	33.75	■■■□□ 2.99
SPECC1-208	ENST00000467722	ATP10D	Q9P241	1426 aa		33.73	■■■□□ 2.99
SPECC1-208	ENST00000467722	CD2AP	Q9Y5K6	639 aa		33.73	■■■□□ 2.99
SPECC1-208	ENST00000467722	FLT4	P35916	1363 aa		33.72	■■■□□ 2.99
SPECC1-208	ENST00000467722	KIF24	Q5T7B8	1368 aa		33.72	■■■□□ 2.99
SPECC1-208	ENST00000467722	HSP90AB2P	Q58FF8	381 aa		33.72	■■■□□ 2.99
SPECC1-208	ENST00000467722	FLAD1	Q8NFF5	587 aa		33.72	■■■□□ 2.99
SPECC1-208	ENST00000467722	MAP2	P11137	1827 aa	Known RBP	33.72	■■■□□ 2.99
SPECC1-208	ENST00000467722	HMGB2	P26583	209 aa	Known RBP	33.71	■■■□□ 2.99
SPECC1-208	ENST00000467722	ANKRD26	Q9UPS8	1709 aa		33.7	■■■□□ 2.98
SPECC1-208	ENST00000467722	CYP27B1	O15528	508 aa		33.69	■■■□□ 2.98
SPECC1-208	ENST00000467722	ADCY9	O60503	1353 aa		33.68	■■■□□ 2.98
SPECC1-208	ENST00000467722	NCAPD2	Q15021	1401 aa		33.68	■■■□□ 2.98
SPECC1-208	ENST00000467722	MPRIP	Q6WCQ1	1025 aa		33.67	■■■□□ 2.98
SPECC1-208	ENST00000467722	AMIGO3	Q86WK7	504 aa		33.65	■■■□□ 2.98
SPECC1-208	ENST00000467722	TMF1	P82094	1093 aa		33.64	■■■□□ 2.98
SPECC1-208	ENST00000467722	SMARCC1	Q92922	1105 aa	Predicted RBP	33.63	■■■□□ 2.97
SPECC1-208	ENST00000467722	NSD3	Q9BZ95	1437 aa		33.62	■■■□□ 2.97
SPECC1-208	ENST00000467722	AK7	Q96M32	723 aa		33.61	■■■□□ 2.97
SPECC1-208	ENST00000467722	NKX1-1	Q15270	411 aa	Predicted RBP	33.57	■■■□□ 2.96
SPECC1-208	ENST00000467722	IFFO2	Q5TF58	517 aa		33.57	■■■□□ 2.96
SPECC1-208	ENST00000467722	PIGB	Q92521	554 aa		33.57	■■■□□ 2.96
SPECC1-208	ENST00000467722	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.57	■■■□□ 2.96
SPECC1-208	ENST00000467722	EMILIN1	Q9Y6C2	1016 aa		33.56	■■■□□ 2.96
SPECC1-208	ENST00000467722	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.55	■■■□□ 2.96
SPECC1-208	ENST00000467722	IGSF1	Q8N6C5	1336 aa		33.54	■■■□□ 2.96
SPECC1-208	ENST00000467722	CIC	Q96RK0	1608 aa	Predicted RBP	33.54	■■■□□ 2.96
SPECC1-208	ENST00000467722	PHF14	O94880	888 aa		33.54	■■■□□ 2.96
SPECC1-208	ENST00000467722	SMIM5	Q71RC9	77 aa		33.54	■■■□□ 2.96
SPECC1-208	ENST00000467722	KIF13B	Q9NQT8	1826 aa		33.53	■■■□□ 2.96
SPECC1-208	ENST00000467722	SSFA2	P28290	1259 aa		33.53	■■■□□ 2.96
SPECC1-208	ENST00000467722	CARD14	Q9BXL6	1004 aa		33.52	■■■□□ 2.96
SPECC1-208	ENST00000467722	KIAA1551	Q9HCM1	1747 aa		33.51	■■■□□ 2.96
SPECC1-208	ENST00000467722	CDCA8	Q53HL2	280 aa		33.51	■■■□□ 2.95
SPECC1-208	ENST00000467722	LINC00116	Q8NCU8	138 aa		33.51	■■■□□ 2.95
SPECC1-208	ENST00000467722	LOC102724428	A0A0B4J2F2	783 aa		33.5	■■■□□ 2.95
SPECC1-208	ENST00000467722	SIK1	P57059	783 aa		33.5	■■■□□ 2.95
SPECC1-208	ENST00000467722	SPG7	Q9UQ90	795 aa		33.49	■■■□□ 2.95
SPECC1-208	ENST00000467722	ZNF526	Q8TF50	670 aa	Predicted RBP	33.47	■■■□□ 2.95
SPECC1-208	ENST00000467722	HSPA6	P17066	643 aa		33.46	■■■□□ 2.95
SPECC1-208	ENST00000467722	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.46	■■■□□ 2.95
SPECC1-208	ENST00000467722	ZNF831	Q5JPB2	1677 aa		33.45	■■■□□ 2.95
SPECC1-208	ENST00000467722	WWC3	Q9ULE0	1092 aa		33.45	■■■□□ 2.95
SPECC1-208	ENST00000467722	WASHC2A	Q641Q2	1341 aa		33.45	■■■□□ 2.95
SPECC1-208	ENST00000467722	ITPK1	Q13572	414 aa		33.44	■■■□□ 2.94
SPECC1-208	ENST00000467722	TMOD3	Q9NYL9	352 aa		33.44	■■■□□ 2.94
SPECC1-208	ENST00000467722	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.43	■■■□□ 2.94
SPECC1-208	ENST00000467722	EYA1	Q99502	592 aa		33.43	■■■□□ 2.94
SPECC1-208	ENST00000467722	ASAP1	Q9ULH1	1129 aa		33.43	■■■□□ 2.94
SPECC1-208	ENST00000467722	PPM1G	O15355	546 aa	Predicted RBP	33.42	■■■□□ 2.94
SPECC1-208	ENST00000467722	GNPAT	O15228	680 aa		33.41	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms