RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
HLA-DOA-203ENST00000467465 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
HLA-DOA-203ENST00000467465 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 MEGF6O75095 1541 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 BTAF1O14981 1849 aa13.22□□□□□ -0.29
HLA-DOA-203ENST00000467465 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
HLA-DOA-203ENST00000467465 ZCRB1Q8TBF4 217 aaKnown RBP13.21□□□□□ -0.29
HLA-DOA-203ENST00000467465 PKD1L3Q7Z443 1732 aa13.21□□□□□ -0.3
HLA-DOA-203ENST00000467465 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
HLA-DOA-203ENST00000467465 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
HLA-DOA-203ENST00000467465 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
HLA-DOA-203ENST00000467465 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
HLA-DOA-203ENST00000467465 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
HLA-DOA-203ENST00000467465 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
HLA-DOA-203ENST00000467465 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
HLA-DOA-203ENST00000467465 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
HLA-DOA-203ENST00000467465 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
HLA-DOA-203ENST00000467465 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
HLA-DOA-203ENST00000467465 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
HLA-DOA-203ENST00000467465 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOA-203ENST00000467465 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
HLA-DOA-203ENST00000467465 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
HLA-DOA-203ENST00000467465 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
HLA-DOA-203ENST00000467465 EYA1Q99502 592 aa13.15□□□□□ -0.3
HLA-DOA-203ENST00000467465 TXNRD1Q16881 649 aa13.14□□□□□ -0.31
HLA-DOA-203ENST00000467465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
HLA-DOA-203ENST00000467465 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
HLA-DOA-203ENST00000467465 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 LY75O60449 1722 aa13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 ITGB4P16144 1822 aa13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
HLA-DOA-203ENST00000467465 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
HLA-DOA-203ENST00000467465 PDGFDQ9GZP0 370 aaPredicted RBP13.12□□□□□ -0.31
HLA-DOA-203ENST00000467465 TOGARAM1Q9Y4F4 1720 aa13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 PAPPAQ13219 1627 aa13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 PROM2Q8N271 834 aa13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
HLA-DOA-203ENST00000467465 CYP27B1O15528 508 aa13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
HLA-DOA-203ENST00000467465 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
HLA-DOA-203ENST00000467465 PTGER2P43116 358 aa13.09□□□□□ -0.31
HLA-DOA-203ENST00000467465 MTHFSP49914 203 aa13.09□□□□□ -0.31
HLA-DOA-203ENST00000467465 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
HLA-DOA-203ENST00000467465 FHDC1Q9C0D6 1143 aaPredicted RBP13.09□□□□□ -0.31
HLA-DOA-203ENST00000467465 SLC15A2Q16348 729 aa13.08□□□□□ -0.32
HLA-DOA-203ENST00000467465 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.32
HLA-DOA-203ENST00000467465 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
HLA-DOA-203ENST00000467465 KDRP35968 1356 aa13.07□□□□□ -0.32
HLA-DOA-203ENST00000467465 IL13P35225 146 aa13.07□□□□□ -0.32
HLA-DOA-203ENST00000467465 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
HLA-DOA-203ENST00000467465 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
HLA-DOA-203ENST00000467465 PHKG2P15735 406 aa13.06□□□□□ -0.32
HLA-DOA-203ENST00000467465 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
HLA-DOA-203ENST00000467465 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
HLA-DOA-203ENST00000467465 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
HLA-DOA-203ENST00000467465 C5P01031 1676 aa13.05□□□□□ -0.32
HLA-DOA-203ENST00000467465 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
HLA-DOA-203ENST00000467465 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
HLA-DOA-203ENST00000467465 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
HLA-DOA-203ENST00000467465 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
HLA-DOA-203ENST00000467465 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
HLA-DOA-203ENST00000467465 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
HLA-DOA-203ENST00000467465 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
HLA-DOA-203ENST00000467465 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
HLA-DOA-203ENST00000467465 SCN11AQ9UI33 1791 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 GPR162Q16538 588 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 DCAF5Q96JK2 942 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 ARXQ96QS3 562 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
HLA-DOA-203ENST00000467465 ERVV-2B6SEH9 535 aa13.02□□□□□ -0.33
HLA-DOA-203ENST00000467465 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
HLA-DOA-203ENST00000467465 PIGBQ92521 554 aa13.01□□□□□ -0.33
HLA-DOA-203ENST00000467465 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
HLA-DOA-203ENST00000467465 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
HLA-DOA-203ENST00000467465 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
HLA-DOA-203ENST00000467465 ZNF827Q17R98 1081 aa13□□□□□ -0.33
HLA-DOA-203ENST00000467465 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
HLA-DOA-203ENST00000467465 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
HLA-DOA-203ENST00000467465 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
HLA-DOA-203ENST00000467465 HMOX1P09601 288 aa12.99□□□□□ -0.33
HLA-DOA-203ENST00000467465 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
HLA-DOA-203ENST00000467465 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms