RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CC2D2BQ6DHV5 1058 aa10.34□□□□□ -0.75
PRPF40A-205ENST00000467114 LYSMD3Q7Z3D4 306 aa10.34□□□□□ -0.75
PRPF40A-205ENST00000467114 COL25A1Q9BXS0 654 aaPredicted RBP10.34□□□□□ -0.75
PRPF40A-205ENST00000467114 CNTNAP3BQ96NU0 1288 aa10.33□□□□□ -0.76
PRPF40A-205ENST00000467114 CNTNAP3Q9BZ76 1288 aa10.33□□□□□ -0.76
PRPF40A-205ENST00000467114 GPC1P35052 558 aa10.32□□□□□ -0.76
PRPF40A-205ENST00000467114 SV2AQ7L0J3 742 aa10.32□□□□□ -0.76
PRPF40A-205ENST00000467114 VWA5B2Q8N398 1253 aa10.32□□□□□ -0.76
PRPF40A-205ENST00000467114 A0A1W2PRU2 124 aa10.3□□□□□ -0.76
PRPF40A-205ENST00000467114 SCTRP47872 440 aa10.3□□□□□ -0.76
PRPF40A-205ENST00000467114 RNFT1Q5M7Z0 435 aa10.3□□□□□ -0.76
PRPF40A-205ENST00000467114 CDC14CA4D256 554 aa10.29□□□□□ -0.76
PRPF40A-205ENST00000467114 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
PRPF40A-205ENST00000467114 CYP2U1Q7Z449 544 aa10.29□□□□□ -0.76
PRPF40A-205ENST00000467114 TRAK2O60296 914 aa10.28□□□□□ -0.76
PRPF40A-205ENST00000467114 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
PRPF40A-205ENST00000467114 MEN1O00255 615 aa10.27□□□□□ -0.77
PRPF40A-205ENST00000467114 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
PRPF40A-205ENST00000467114 SLURP2P0DP57 97 aa10.26□□□□□ -0.77
PRPF40A-205ENST00000467114 CLN3Q13286 438 aa10.26□□□□□ -0.77
PRPF40A-205ENST00000467114 CUEDC1Q9NWM3 386 aaPredicted RBP10.26□□□□□ -0.77
PRPF40A-205ENST00000467114 CEP126Q9P2H0 1117 aa10.26□□□□□ -0.77
PRPF40A-205ENST00000467114 RHOQP17081 205 aa10.25□□□□□ -0.77
PRPF40A-205ENST00000467114 GRIP2Q9C0E4 1043 aa10.25□□□□□ -0.77
PRPF40A-205ENST00000467114 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
PRPF40A-205ENST00000467114 GMCL1Q96IK5 515 aa10.24□□□□□ -0.77
PRPF40A-205ENST00000467114 NLRP3Q96P20 1036 aa10.24□□□□□ -0.77
PRPF40A-205ENST00000467114 ZNF385CQ66K41 422 aaPredicted RBP10.23□□□□□ -0.77
PRPF40A-205ENST00000467114 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
PRPF40A-205ENST00000467114 PRM3Q9NNZ6 103 aa10.23□□□□□ -0.77
PRPF40A-205ENST00000467114 IRF5Q13568 498 aa10.22□□□□□ -0.77
PRPF40A-205ENST00000467114 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
PRPF40A-205ENST00000467114 ESF1Q9H501 851 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-205ENST00000467114 ARHGEF10LQ9HCE6 1279 aa10.22□□□□□ -0.77
PRPF40A-205ENST00000467114 DYRK1BQ9Y463 629 aa10.22□□□□□ -0.77
PRPF40A-205ENST00000467114 SPATA31C2B4DYI2 1134 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 GNRH1P01148 92 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 POU4F2Q12837 409 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 WDR44Q5JSH3 913 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 TRIM22Q8IYM9 498 aa10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
PRPF40A-205ENST00000467114 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 GAS6Q14393 721 aa10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 WHAMMQ8TF30 809 aa10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 CDCA7Q9BWT1 371 aaPredicted RBP10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
PRPF40A-205ENST00000467114 GSK3AP49840 483 aa10.19□□□□□ -0.78
PRPF40A-205ENST00000467114 SRSF11Q05519 484 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-205ENST00000467114 PHTF2Q8N3S3 785 aa10.19□□□□□ -0.78
PRPF40A-205ENST00000467114 MYCP01106 439 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-205ENST00000467114 DBN1Q16643 649 aa10.18□□□□□ -0.78
PRPF40A-205ENST00000467114 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
PRPF40A-205ENST00000467114 ESYT1Q9BSJ8 1104 aa10.18□□□□□ -0.78
PRPF40A-205ENST00000467114 ARHGEF15O94989 841 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 IL2RAP01589 272 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 RAB6BQ9NRW1 208 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 HRH3Q9Y5N1 445 aa10.17□□□□□ -0.78
PRPF40A-205ENST00000467114 H7C1W4 665 aa10.16□□□□□ -0.78
PRPF40A-205ENST00000467114 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
PRPF40A-205ENST00000467114 TAS1R3Q7RTX0 852 aa10.16□□□□□ -0.78
PRPF40A-205ENST00000467114 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
PRPF40A-205ENST00000467114 WASLO00401 505 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 CENPCQ03188 943 aa10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 TSGA10IPQ3SY00 556 aa10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 FOXR1Q6PIV2 292 aa10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 XAGE2Q96GT9 111 aa10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 GAS2L1Q99501 681 aaPredicted RBP10.15□□□□□ -0.78
PRPF40A-205ENST00000467114 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
PRPF40A-205ENST00000467114 TIMMDC1Q9NPL8 285 aa10.14□□□□□ -0.79
PRPF40A-205ENST00000467114 MBIPQ9NS73 344 aa10.14□□□□□ -0.79
PRPF40A-205ENST00000467114 RNF225M0QZC1 329 aaPredicted RBP10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 VAC14Q08AM6 782 aa10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 USP4Q13107 963 aa10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 SLFNL1Q499Z3 407 aa10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 LYPD4Q6UWN0 246 aa10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
PRPF40A-205ENST00000467114 GPR25O00155 361 aa10.12□□□□□ -0.79
PRPF40A-205ENST00000467114 F11P03951 625 aa10.12□□□□□ -0.79
PRPF40A-205ENST00000467114 GTPBP3Q969Y2 492 aaKnown RBP10.12□□□□□ -0.79
PRPF40A-205ENST00000467114 FHDC1Q9C0D6 1143 aaPredicted RBP10.12□□□□□ -0.79
PRPF40A-205ENST00000467114 WASHC4Q2M389 1173 aa10.11□□□□□ -0.79
PRPF40A-205ENST00000467114 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
PRPF40A-205ENST00000467114 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
PRPF40A-205ENST00000467114 ZSCAN10Q96SZ4 725 aaPredicted RBP10.11□□□□□ -0.79
PRPF40A-205ENST00000467114 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-205ENST00000467114 ABL2P42684 1182 aa10.1□□□□□ -0.79
PRPF40A-205ENST00000467114 RASSF7Q02833 373 aa10.1□□□□□ -0.79
PRPF40A-205ENST00000467114 MCM6Q14566 821 aa10.1□□□□□ -0.79
PRPF40A-205ENST00000467114 SIRT1Q96EB6 747 aa10.09□□□□□ -0.79
PRPF40A-205ENST00000467114 TRERF1Q96PN7 1200 aa10.09□□□□□ -0.79
PRPF40A-205ENST00000467114 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
PRPF40A-205ENST00000467114 ETNK1Q9HBU6 452 aa10.09□□□□□ -0.79
PRPF40A-205ENST00000467114 IGF1RP08069 1367 aa10.09□□□□□ -0.79
PRPF40A-205ENST00000467114 TMEM151AQ8N4L1 468 aa10.08□□□□□ -0.8
PRPF40A-205ENST00000467114 A0A1B0GTH6 734 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms