RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 C10orf71Q711Q0 1435 aa18.81■□□□□ 0.6
UBR4-210ENST00000466969 FOXN1O15353 648 aa18.8■□□□□ 0.6
UBR4-210ENST00000466969 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
UBR4-210ENST00000466969 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
UBR4-210ENST00000466969 RGPD5Q99666 1765 aa18.8■□□□□ 0.6
UBR4-210ENST00000466969 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
UBR4-210ENST00000466969 KCPQ6ZWJ8 1503 aa18.78■□□□□ 0.6
UBR4-210ENST00000466969 CTCFP49711 727 aaPredicted RBP18.77■□□□□ 0.6
UBR4-210ENST00000466969 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
UBR4-210ENST00000466969 AIDAQ96BJ3 306 aa18.76■□□□□ 0.59
UBR4-210ENST00000466969 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
UBR4-210ENST00000466969 LY75O60449 1722 aa18.76■□□□□ 0.59
UBR4-210ENST00000466969 KIAA1210Q9ULL0 1709 aa18.76■□□□□ 0.59
UBR4-210ENST00000466969 SOX12O15370 315 aa18.75■□□□□ 0.59
UBR4-210ENST00000466969 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
UBR4-210ENST00000466969 PRIM1P49642 420 aaKnown RBP18.75■□□□□ 0.59
UBR4-210ENST00000466969 RGS19P49795 217 aa18.74■□□□□ 0.59
UBR4-210ENST00000466969 DDX54Q8TDD1 881 aaKnown RBP18.74■□□□□ 0.59
UBR4-210ENST00000466969 PXDNLA1KZ92 1463 aa18.73■□□□□ 0.59
UBR4-210ENST00000466969 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
UBR4-210ENST00000466969 TNRC6CQ9HCJ0 1690 aaKnown RBP18.72■□□□□ 0.59
UBR4-210ENST00000466969 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
UBR4-210ENST00000466969 MKRN1Q9UHC7 482 aaKnown RBP18.71■□□□□ 0.59
UBR4-210ENST00000466969 USP47Q96K76 1375 aa18.7■□□□□ 0.58
UBR4-210ENST00000466969 FCHSD2O94868 740 aa18.7■□□□□ 0.58
UBR4-210ENST00000466969 TGFB2P61812 414 aa18.69■□□□□ 0.58
UBR4-210ENST00000466969 LBX1P52954 281 aa18.68■□□□□ 0.58
UBR4-210ENST00000466969 SRPK2P78362 688 aaKnown RBP18.68■□□□□ 0.58
UBR4-210ENST00000466969 RNF181Q9P0P0 153 aa18.68■□□□□ 0.58
UBR4-210ENST00000466969 PKD1L3Q7Z443 1732 aa18.67■□□□□ 0.58
UBR4-210ENST00000466969 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
UBR4-210ENST00000466969 AK7Q96M32 723 aa18.66■□□□□ 0.58
UBR4-210ENST00000466969 ERBB3P21860 1342 aa18.66■□□□□ 0.58
UBR4-210ENST00000466969 NSD2O96028 1365 aa18.66■□□□□ 0.58
UBR4-210ENST00000466969 PHF14O94880 888 aa18.65■□□□□ 0.58
UBR4-210ENST00000466969 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
UBR4-210ENST00000466969 CREBZFQ9NS37 354 aa18.65■□□□□ 0.58
UBR4-210ENST00000466969 C5P01031 1676 aa18.64■□□□□ 0.57
UBR4-210ENST00000466969 USP54Q70EL1 1684 aa18.64■□□□□ 0.57
UBR4-210ENST00000466969 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
UBR4-210ENST00000466969 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
UBR4-210ENST00000466969 N4BP2Q86UW6 1770 aaPredicted RBP18.63■□□□□ 0.57
UBR4-210ENST00000466969 NSD3Q9BZ95 1437 aa18.61■□□□□ 0.57
UBR4-210ENST00000466969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
UBR4-210ENST00000466969 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
UBR4-210ENST00000466969 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
UBR4-210ENST00000466969 CABP1Q9NZU7 370 aa18.6■□□□□ 0.57
UBR4-210ENST00000466969 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
UBR4-210ENST00000466969 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
UBR4-210ENST00000466969 CABP2Q9NPB3 220 aa18.59■□□□□ 0.57
UBR4-210ENST00000466969 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.57
UBR4-210ENST00000466969 MMP10P09238 476 aa18.58■□□□□ 0.56
UBR4-210ENST00000466969 DPEP1P16444 411 aa18.58■□□□□ 0.56
UBR4-210ENST00000466969 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 WBP1LQ9NX94 342 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 KIF13BQ9NQT8 1826 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 NFAT5O94916 1531 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 KIAA1551Q9HCM1 1747 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
UBR4-210ENST00000466969 ZC3H4Q9UPT8 1303 aaKnown RBP18.56■□□□□ 0.56
UBR4-210ENST00000466969 SSFA2P28290 1259 aa18.56■□□□□ 0.56
UBR4-210ENST00000466969 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
UBR4-210ENST00000466969 HSPA8P11142 646 aaKnown RBP18.55■□□□□ 0.56
UBR4-210ENST00000466969 TAF1LQ8IZX4 1826 aa18.55■□□□□ 0.56
UBR4-210ENST00000466969 C4BP0C0L5 1744 aa18.54■□□□□ 0.56
UBR4-210ENST00000466969 TTC21BQ7Z4L5 1316 aa18.54■□□□□ 0.56
UBR4-210ENST00000466969 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
UBR4-210ENST00000466969 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 CCDC87Q9NVE4 849 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 PALLDQ8WX93 1383 aa18.53■□□□□ 0.56
UBR4-210ENST00000466969 DALRD3Q5D0E6 543 aaKnown RBP18.52■□□□□ 0.56
UBR4-210ENST00000466969 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.55
UBR4-210ENST00000466969 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
UBR4-210ENST00000466969 VEGFBP49765 207 aa18.51■□□□□ 0.55
UBR4-210ENST00000466969 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
UBR4-210ENST00000466969 TNRC18O15417 2968 aaPredicted RBP18.5■□□□□ 0.55
UBR4-210ENST00000466969 TOGARAM1Q9Y4F4 1720 aa18.5■□□□□ 0.55
UBR4-210ENST00000466969 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
UBR4-210ENST00000466969 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
UBR4-210ENST00000466969 STAC3Q96MF2 364 aa18.49■□□□□ 0.55
UBR4-210ENST00000466969 SBF1O95248 1867 aa18.48■□□□□ 0.55
UBR4-210ENST00000466969 CHADLQ6NUI6 762 aa18.48■□□□□ 0.55
UBR4-210ENST00000466969 KCNA3P22001 575 aa18.47■□□□□ 0.55
UBR4-210ENST00000466969 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
UBR4-210ENST00000466969 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
UBR4-210ENST00000466969 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
UBR4-210ENST00000466969 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
UBR4-210ENST00000466969 GNPATO15228 680 aa18.44■□□□□ 0.54
UBR4-210ENST00000466969 TMF1P82094 1093 aa18.44■□□□□ 0.54
UBR4-210ENST00000466969 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
UBR4-210ENST00000466969 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
UBR4-210ENST00000466969 LMNB1P20700 586 aa18.43■□□□□ 0.54
UBR4-210ENST00000466969 PRPF38BQ5VTL8 546 aaKnown RBP18.43■□□□□ 0.54
UBR4-210ENST00000466969 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
UBR4-210ENST00000466969 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
UBR4-210ENST00000466969 LTN1O94822 1766 aa18.42■□□□□ 0.54
UBR4-210ENST00000466969 POTECB2RU33 542 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms