RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
PDCD11-202ENST00000466959 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
PDCD11-202ENST00000466959 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
PDCD11-202ENST00000466959 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
PDCD11-202ENST00000466959 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
PDCD11-202ENST00000466959 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
PDCD11-202ENST00000466959 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
PDCD11-202ENST00000466959 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
PDCD11-202ENST00000466959 MEGF6O75095 1541 aa17.59■□□□□ 0.41
PDCD11-202ENST00000466959 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
PDCD11-202ENST00000466959 THRAP3Q9Y2W1 955 aaKnown RBP17.59■□□□□ 0.41
PDCD11-202ENST00000466959 DISP2A7MBM2 1401 aa17.58■□□□□ 0.41
PDCD11-202ENST00000466959 RAPGEF4Q8WZA2 1011 aa17.58■□□□□ 0.4
PDCD11-202ENST00000466959 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
PDCD11-202ENST00000466959 PLEKHF1Q96S99 279 aa17.58■□□□□ 0.4
PDCD11-202ENST00000466959 USP35Q9P2H5 1018 aa17.58■□□□□ 0.4
PDCD11-202ENST00000466959 OVOS2A0A0G2JMS6 1433 aa17.57■□□□□ 0.4
PDCD11-202ENST00000466959 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
PDCD11-202ENST00000466959 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
PDCD11-202ENST00000466959 NEFMP07197 916 aa17.56■□□□□ 0.4
PDCD11-202ENST00000466959 IL2RBP14784 551 aa17.56■□□□□ 0.4
PDCD11-202ENST00000466959 TATP17735 454 aaPredicted RBP17.56■□□□□ 0.4
PDCD11-202ENST00000466959 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
PDCD11-202ENST00000466959 BARGINQ6ZT62 677 aa17.55■□□□□ 0.4
PDCD11-202ENST00000466959 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
PDCD11-202ENST00000466959 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
PDCD11-202ENST00000466959 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
PDCD11-202ENST00000466959 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
PDCD11-202ENST00000466959 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
PDCD11-202ENST00000466959 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
PDCD11-202ENST00000466959 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
PDCD11-202ENST00000466959 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.4
PDCD11-202ENST00000466959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.52■□□□□ 0.4
PDCD11-202ENST00000466959 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
PDCD11-202ENST00000466959 R3HDM1Q15032 1099 aaKnown RBP17.51■□□□□ 0.39
PDCD11-202ENST00000466959 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
PDCD11-202ENST00000466959 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
PDCD11-202ENST00000466959 APAF1O14727 1248 aa17.5■□□□□ 0.39
PDCD11-202ENST00000466959 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
PDCD11-202ENST00000466959 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
PDCD11-202ENST00000466959 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
PDCD11-202ENST00000466959 SPG7Q9UQ90 795 aa17.5■□□□□ 0.39
PDCD11-202ENST00000466959 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
PDCD11-202ENST00000466959 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
PDCD11-202ENST00000466959 ZCRB1Q8TBF4 217 aaKnown RBP17.49■□□□□ 0.39
PDCD11-202ENST00000466959 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
PDCD11-202ENST00000466959 YY1P25490 414 aa17.48■□□□□ 0.39
PDCD11-202ENST00000466959 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
PDCD11-202ENST00000466959 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
PDCD11-202ENST00000466959 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
PDCD11-202ENST00000466959 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
PDCD11-202ENST00000466959 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
PDCD11-202ENST00000466959 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
PDCD11-202ENST00000466959 EXOC5O00471 708 aa17.46■□□□□ 0.39
PDCD11-202ENST00000466959 DDB1Q16531 1140 aa17.46■□□□□ 0.39
PDCD11-202ENST00000466959 NGEFQ8N5V2 710 aa17.46■□□□□ 0.39
PDCD11-202ENST00000466959 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
PDCD11-202ENST00000466959 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
PDCD11-202ENST00000466959 RIPK4P57078 832 aa17.45■□□□□ 0.38
PDCD11-202ENST00000466959 HNRNPUQ00839 825 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDCD11-202ENST00000466959 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
PDCD11-202ENST00000466959 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
PDCD11-202ENST00000466959 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
PDCD11-202ENST00000466959 CYP27B1O15528 508 aa17.44■□□□□ 0.38
PDCD11-202ENST00000466959 PHKG2P15735 406 aa17.44■□□□□ 0.38
PDCD11-202ENST00000466959 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
PDCD11-202ENST00000466959 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
PDCD11-202ENST00000466959 SENP3-EIF4A1A0A087X0R7 540 aa17.43■□□□□ 0.38
PDCD11-202ENST00000466959 GNAT3A8MTJ3 354 aa17.43■□□□□ 0.38
PDCD11-202ENST00000466959 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
PDCD11-202ENST00000466959 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
PDCD11-202ENST00000466959 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
PDCD11-202ENST00000466959 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
PDCD11-202ENST00000466959 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
PDCD11-202ENST00000466959 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
PDCD11-202ENST00000466959 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
PDCD11-202ENST00000466959 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
PDCD11-202ENST00000466959 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
PDCD11-202ENST00000466959 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
PDCD11-202ENST00000466959 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
PDCD11-202ENST00000466959 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
PDCD11-202ENST00000466959 KDM6AO15550 1401 aaPredicted RBP17.39■□□□□ 0.38
PDCD11-202ENST00000466959 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
PDCD11-202ENST00000466959 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
PDCD11-202ENST00000466959 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
PDCD11-202ENST00000466959 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
PDCD11-202ENST00000466959 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
PDCD11-202ENST00000466959 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.37
PDCD11-202ENST00000466959 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
PDCD11-202ENST00000466959 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
PDCD11-202ENST00000466959 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
PDCD11-202ENST00000466959 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
PDCD11-202ENST00000466959 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
PDCD11-202ENST00000466959 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
PDCD11-202ENST00000466959 MRC1P22897 1456 aa17.37■□□□□ 0.37
PDCD11-202ENST00000466959 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
PDCD11-202ENST00000466959 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
PDCD11-202ENST00000466959 FAM196AQ6ZSG2 479 aa17.37■□□□□ 0.37
PDCD11-202ENST00000466959 MCM10Q7L590 875 aa17.37■□□□□ 0.37
PDCD11-202ENST00000466959 ITGB4P16144 1822 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms