RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 FAM181BA6NEQ2 426 aa12.15□□□□□ -0.46
SLF1-203ENST00000466957 CYP2U1Q7Z449 544 aa12.15□□□□□ -0.46
SLF1-203ENST00000466957 CDC14CA4D256 554 aa12.14□□□□□ -0.47
SLF1-203ENST00000466957 ABL2P42684 1182 aa12.14□□□□□ -0.47
SLF1-203ENST00000466957 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLF1-203ENST00000466957 PRICKLE2Q7Z3G6 844 aa12.14□□□□□ -0.47
SLF1-203ENST00000466957 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
SLF1-203ENST00000466957 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
SLF1-203ENST00000466957 A0A1W2PRU2 124 aa12.13□□□□□ -0.47
SLF1-203ENST00000466957 RHOQP17081 205 aa12.12□□□□□ -0.47
SLF1-203ENST00000466957 ITGA6P23229 1130 aa12.12□□□□□ -0.47
SLF1-203ENST00000466957 RNF144AP50876 292 aaPredicted RBP12.12□□□□□ -0.47
SLF1-203ENST00000466957 IRF5Q13568 498 aa12.12□□□□□ -0.47
SLF1-203ENST00000466957 NLRP3Q96P20 1036 aa12.12□□□□□ -0.47
SLF1-203ENST00000466957 VAC14Q08AM6 782 aa12.11□□□□□ -0.47
SLF1-203ENST00000466957 GPR161Q8N6U8 529 aaKnown RBP12.11□□□□□ -0.47
SLF1-203ENST00000466957 MYCP01106 439 aaPredicted RBP12.1□□□□□ -0.47
SLF1-203ENST00000466957 LORP23490 312 aaPredicted RBP12.1□□□□□ -0.47
SLF1-203ENST00000466957 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
SLF1-203ENST00000466957 VWA5B2Q8N398 1253 aa12.1□□□□□ -0.47
SLF1-203ENST00000466957 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
SLF1-203ENST00000466957 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
SLF1-203ENST00000466957 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
SLF1-203ENST00000466957 MCM6Q14566 821 aa12.09□□□□□ -0.47
SLF1-203ENST00000466957 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
SLF1-203ENST00000466957 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
SLF1-203ENST00000466957 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
SLF1-203ENST00000466957 SV2AQ7L0J3 742 aa12.08□□□□□ -0.48
SLF1-203ENST00000466957 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
SLF1-203ENST00000466957 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
SLF1-203ENST00000466957 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
SLF1-203ENST00000466957 RAB6BQ9NRW1 208 aa12.08□□□□□ -0.48
SLF1-203ENST00000466957 GPC1P35052 558 aa12.07□□□□□ -0.48
SLF1-203ENST00000466957 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
SLF1-203ENST00000466957 TRAK2O60296 914 aa12.06□□□□□ -0.48
SLF1-203ENST00000466957 CLN3Q13286 438 aa12.06□□□□□ -0.48
SLF1-203ENST00000466957 RNF135Q8IUD6 432 aa12.06□□□□□ -0.48
SLF1-203ENST00000466957 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
SLF1-203ENST00000466957 KRT76Q01546 638 aa12.04□□□□□ -0.48
SLF1-203ENST00000466957 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
SLF1-203ENST00000466957 POU4F2Q12837 409 aa12.03□□□□□ -0.48
SLF1-203ENST00000466957 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
SLF1-203ENST00000466957 GNRH1P01148 92 aa12.02□□□□□ -0.49
SLF1-203ENST00000466957 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.49
SLF1-203ENST00000466957 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
SLF1-203ENST00000466957 RNFT1Q5M7Z0 435 aa12.01□□□□□ -0.49
SLF1-203ENST00000466957 RIPOR1Q6ZS17 1223 aa12.01□□□□□ -0.49
SLF1-203ENST00000466957 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
SLF1-203ENST00000466957 GAS2L1Q99501 681 aaPredicted RBP12□□□□□ -0.49
SLF1-203ENST00000466957 GRIP2Q9C0E4 1043 aa12□□□□□ -0.49
SLF1-203ENST00000466957 CUEDC1Q9NWM3 386 aaPredicted RBP12□□□□□ -0.49
SLF1-203ENST00000466957 IL2RAP01589 272 aa11.99□□□□□ -0.49
SLF1-203ENST00000466957 USP4Q13107 963 aa11.99□□□□□ -0.49
SLF1-203ENST00000466957 PHTF2Q8N3S3 785 aa11.99□□□□□ -0.49
SLF1-203ENST00000466957 ESYT1Q9BSJ8 1104 aa11.99□□□□□ -0.49
SLF1-203ENST00000466957 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
SLF1-203ENST00000466957 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
SLF1-203ENST00000466957 NBPF15Q8N660 670 aa11.98□□□□□ -0.49
SLF1-203ENST00000466957 TAS1R3Q7RTX0 852 aa11.97□□□□□ -0.49
SLF1-203ENST00000466957 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
SLF1-203ENST00000466957 DYRK1BQ9Y463 629 aa11.97□□□□□ -0.49
SLF1-203ENST00000466957 CENPCQ03188 943 aa11.96□□□□□ -0.49
SLF1-203ENST00000466957 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
SLF1-203ENST00000466957 WWC1Q8IX03 1113 aa11.96□□□□□ -0.49
SLF1-203ENST00000466957 ZNF837Q96EG3 531 aaPredicted RBP11.96□□□□□ -0.49
SLF1-203ENST00000466957 ZSCAN10Q96SZ4 725 aaPredicted RBP11.96□□□□□ -0.49
SLF1-203ENST00000466957 TIMMDC1Q9NPL8 285 aa11.96□□□□□ -0.49
SLF1-203ENST00000466957 SPATA31C2B4DYI2 1134 aa11.95□□□□□ -0.5
SLF1-203ENST00000466957 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
SLF1-203ENST00000466957 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
SLF1-203ENST00000466957 SOX11P35716 441 aa11.95□□□□□ -0.5
SLF1-203ENST00000466957 STAU1O95793 577 aaKnown RBP11.94□□□□□ -0.5
SLF1-203ENST00000466957 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
SLF1-203ENST00000466957 PLPP7Q8NBV4 271 aa11.94□□□□□ -0.5
SLF1-203ENST00000466957 POM121Q96HA1 1249 aa11.94□□□□□ -0.5
SLF1-203ENST00000466957 GPR25O00155 361 aa11.93□□□□□ -0.5
SLF1-203ENST00000466957 RAD21O60216 631 aa11.93□□□□□ -0.5
SLF1-203ENST00000466957 PHKA2P46019 1235 aa11.93□□□□□ -0.5
SLF1-203ENST00000466957 TMEM214Q6NUQ4 689 aaKnown RBP11.93□□□□□ -0.5
SLF1-203ENST00000466957 FOXR1Q6PIV2 292 aa11.93□□□□□ -0.5
SLF1-203ENST00000466957 SVOPQ8N4V2 548 aa11.93□□□□□ -0.5
SLF1-203ENST00000466957 H7C1W4 665 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 DBN1Q16643 649 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
SLF1-203ENST00000466957 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
SLF1-203ENST00000466957 MAP7D1Q3KQU3 841 aa11.91□□□□□ -0.5
SLF1-203ENST00000466957 WDR44Q5JSH3 913 aa11.91□□□□□ -0.5
SLF1-203ENST00000466957 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
SLF1-203ENST00000466957 TLR1Q15399 786 aa11.9□□□□□ -0.5
SLF1-203ENST00000466957 GTPBP3Q969Y2 492 aaKnown RBP11.9□□□□□ -0.5
SLF1-203ENST00000466957 GPAMQ9HCL2 828 aa11.9□□□□□ -0.5
SLF1-203ENST00000466957 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
SLF1-203ENST00000466957 FLIIQ13045 1269 aa11.89□□□□□ -0.51
SLF1-203ENST00000466957 FHDC1Q9C0D6 1143 aaPredicted RBP11.89□□□□□ -0.51
SLF1-203ENST00000466957 HRH3Q9Y5N1 445 aa11.89□□□□□ -0.51
SLF1-203ENST00000466957 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
SLF1-203ENST00000466957 F11P03951 625 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms