RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CYLDQ9NQC7 956 aa9.02□□□□□ -0.97
LRCH3-212ENST00000466845 RAD21O60216 631 aa9.01□□□□□ -0.97
LRCH3-212ENST00000466845 MYCP01106 439 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-212ENST00000466845 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-212ENST00000466845 PCDHB11Q9Y5F2 797 aa9.01□□□□□ -0.97
LRCH3-212ENST00000466845 VSIG8P0DPA2 414 aa9□□□□□ -0.97
LRCH3-212ENST00000466845 ABL2P42684 1182 aa9□□□□□ -0.97
LRCH3-212ENST00000466845 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
LRCH3-212ENST00000466845 USP4Q13107 963 aa9□□□□□ -0.97
LRCH3-212ENST00000466845 SLFNL1Q499Z3 407 aa9□□□□□ -0.97
LRCH3-212ENST00000466845 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
LRCH3-212ENST00000466845 SOBPA7XYQ1 873 aa8.99□□□□□ -0.97
LRCH3-212ENST00000466845 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
LRCH3-212ENST00000466845 KDF1Q8NAX2 398 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-212ENST00000466845 ZNF395Q9H8N7 513 aaPredicted RBP8.99□□□□□ -0.97
LRCH3-212ENST00000466845 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
LRCH3-212ENST00000466845 PPFIA3O75145 1194 aa8.98□□□□□ -0.97
LRCH3-212ENST00000466845 GNRH1P01148 92 aa8.98□□□□□ -0.97
LRCH3-212ENST00000466845 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
LRCH3-212ENST00000466845 MAP7D1Q3KQU3 841 aa8.98□□□□□ -0.97
LRCH3-212ENST00000466845 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
LRCH3-212ENST00000466845 TRAK2O60296 914 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 PTSQ03393 145 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 VAC14Q08AM6 782 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 LYSMD3Q7Z3D4 306 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 RNF217Q8TC41 542 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 CHIC2Q9UKJ5 165 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
LRCH3-212ENST00000466845 SLC35F4A4IF30 521 aa8.96□□□□□ -0.98
LRCH3-212ENST00000466845 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-212ENST00000466845 CLN3Q13286 438 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 NANOS1Q8WY41 292 aaKnown RBP8.95□□□□□ -0.98
LRCH3-212ENST00000466845 BCL11AQ9H165 835 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 OSBPL3Q9H4L5 887 aa8.95□□□□□ -0.98
LRCH3-212ENST00000466845 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
LRCH3-212ENST00000466845 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
LRCH3-212ENST00000466845 CCDC155Q8N6L0 562 aa8.94□□□□□ -0.98
LRCH3-212ENST00000466845 GMCL1Q96IK5 515 aa8.94□□□□□ -0.98
LRCH3-212ENST00000466845 CCDC85AQ96PX6 553 aaPredicted RBP8.94□□□□□ -0.98
LRCH3-212ENST00000466845 DOLKQ9UPQ8 538 aa8.94□□□□□ -0.98
LRCH3-212ENST00000466845 VEGFBP49765 207 aa8.93□□□□□ -0.98
LRCH3-212ENST00000466845 TRIM26Q12899 539 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-212ENST00000466845 FOXD4L5Q5VV16 416 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-212ENST00000466845 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
LRCH3-212ENST00000466845 MEN1O00255 615 aa8.92□□□□□ -0.98
LRCH3-212ENST00000466845 GMPRP36959 345 aa8.92□□□□□ -0.98
LRCH3-212ENST00000466845 SCTRP47872 440 aa8.92□□□□□ -0.98
LRCH3-212ENST00000466845 STK17AQ9UEE5 414 aa8.92□□□□□ -0.98
LRCH3-212ENST00000466845 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
LRCH3-212ENST00000466845 NFATC2IPQ8NCF5 419 aa8.91□□□□□ -0.98
LRCH3-212ENST00000466845 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
LRCH3-212ENST00000466845 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
LRCH3-212ENST00000466845 ERBB4Q15303 1308 aa8.9□□□□□ -0.98
LRCH3-212ENST00000466845 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
LRCH3-212ENST00000466845 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
LRCH3-212ENST00000466845 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
LRCH3-212ENST00000466845 ITGA6P23229 1130 aa8.89□□□□□ -0.99
LRCH3-212ENST00000466845 GTF2E1P29083 439 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-212ENST00000466845 CDCA7Q9BWT1 371 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-212ENST00000466845 ALG2Q9H553 416 aa8.89□□□□□ -0.99
LRCH3-212ENST00000466845 LOC105371045A0A1W2PR82 267 aa8.88□□□□□ -0.99
LRCH3-212ENST00000466845 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
LRCH3-212ENST00000466845 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
LRCH3-212ENST00000466845 CNKSR1Q969H4 720 aa8.88□□□□□ -0.99
LRCH3-212ENST00000466845 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
LRCH3-212ENST00000466845 H7C1W4 665 aa8.87□□□□□ -0.99
LRCH3-212ENST00000466845 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
LRCH3-212ENST00000466845 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
LRCH3-212ENST00000466845 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
LRCH3-212ENST00000466845 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
LRCH3-212ENST00000466845 CENPCQ03188 943 aa8.85□□□□□ -0.99
LRCH3-212ENST00000466845 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
LRCH3-212ENST00000466845 TAS1R3Q7RTX0 852 aa8.85□□□□□ -0.99
LRCH3-212ENST00000466845 POM121Q96HA1 1249 aa8.85□□□□□ -0.99
LRCH3-212ENST00000466845 HRH3Q9Y5N1 445 aa8.85□□□□□ -0.99
LRCH3-212ENST00000466845 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-212ENST00000466845 IL2RAP01589 272 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 EML3Q32P44 896 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 TSGA10IPQ3SY00 556 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 GNASQ5JWF2 1037 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
LRCH3-212ENST00000466845 FOXR1Q6PIV2 292 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 NBPF15Q8N660 670 aa8.84□□□□□ -0.99
LRCH3-212ENST00000466845 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
LRCH3-212ENST00000466845 POU4F2Q12837 409 aa8.83□□□□□ -1
LRCH3-212ENST00000466845 NOD1Q9Y239 953 aa8.83□□□□□ -1
LRCH3-212ENST00000466845 TRIM22Q8IYM9 498 aa8.82□□□□□ -1
LRCH3-212ENST00000466845 VWA5B2Q8N398 1253 aa8.82□□□□□ -1
LRCH3-212ENST00000466845 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
LRCH3-212ENST00000466845 A6NJR5 290 aa8.81□□□□□ -1
LRCH3-212ENST00000466845 INHAP05111 366 aa8.81□□□□□ -1
LRCH3-212ENST00000466845 SKIP12755 728 aa8.81□□□□□ -1
LRCH3-212ENST00000466845 RHOQP17081 205 aa8.81□□□□□ -1
LRCH3-212ENST00000466845 TMEM214Q6NUQ4 689 aaKnown RBP8.81□□□□□ -1
LRCH3-212ENST00000466845 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
LRCH3-212ENST00000466845 A0A1B0GTH6 734 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms