RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
CHMP2B-202ENST00000466696 GPC1P35052 558 aa9.33□□□□□ -0.92
CHMP2B-202ENST00000466696 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
CHMP2B-202ENST00000466696 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
CHMP2B-202ENST00000466696 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
CHMP2B-202ENST00000466696 PCDHB11Q9Y5F2 797 aa9.33□□□□□ -0.92
CHMP2B-202ENST00000466696 CDC14CA4D256 554 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 MEN1O00255 615 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 KRT76Q01546 638 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 VWA5B2Q8N398 1253 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 COL25A1Q9BXS0 654 aaPredicted RBP9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
CHMP2B-202ENST00000466696 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
CHMP2B-202ENST00000466696 PRICKLE2Q7Z3G6 844 aa9.31□□□□□ -0.92
CHMP2B-202ENST00000466696 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
CHMP2B-202ENST00000466696 SCTRP47872 440 aa9.29□□□□□ -0.92
CHMP2B-202ENST00000466696 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
CHMP2B-202ENST00000466696 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
CHMP2B-202ENST00000466696 TRAK2O60296 914 aa9.28□□□□□ -0.92
CHMP2B-202ENST00000466696 CLN3Q13286 438 aa9.28□□□□□ -0.92
CHMP2B-202ENST00000466696 RHOQP17081 205 aa9.27□□□□□ -0.93
CHMP2B-202ENST00000466696 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
CHMP2B-202ENST00000466696 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
CHMP2B-202ENST00000466696 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
CHMP2B-202ENST00000466696 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
CHMP2B-202ENST00000466696 MYCP01106 439 aaPredicted RBP9.26□□□□□ -0.93
CHMP2B-202ENST00000466696 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
CHMP2B-202ENST00000466696 GNRH1P01148 92 aa9.25□□□□□ -0.93
CHMP2B-202ENST00000466696 GRIP2Q9C0E4 1043 aa9.25□□□□□ -0.93
CHMP2B-202ENST00000466696 ARHGEF10LQ9HCE6 1279 aa9.25□□□□□ -0.93
CHMP2B-202ENST00000466696 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
CHMP2B-202ENST00000466696 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
CHMP2B-202ENST00000466696 SLURP2P0DP57 97 aa9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 POU4F2Q12837 409 aa9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 IRF5Q13568 498 aa9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 WDR44Q5JSH3 913 aa9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
CHMP2B-202ENST00000466696 SPATA31C2B4DYI2 1134 aa9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 SLFNL1Q499Z3 407 aa9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 NBPF10Q6P3W6 841 aaKnown RBP9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 FOXR1Q6PIV2 292 aa9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
CHMP2B-202ENST00000466696 H7C1W4 665 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 RIPOR1Q6ZS17 1223 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 SVOPQ8N4V2 548 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 ZNF837Q96EG3 531 aaPredicted RBP9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 RAB6BQ9NRW1 208 aa9.21□□□□□ -0.94
CHMP2B-202ENST00000466696 USP4Q13107 963 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 ZNF385CQ66K41 422 aaPredicted RBP9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
CHMP2B-202ENST00000466696 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 ABL2P42684 1182 aa9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 SRSF11Q05519 484 aaKnown RBP9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 VAC14Q08AM6 782 aa9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 RNF135Q8IUD6 432 aa9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 TIMMDC1Q9NPL8 285 aa9.19□□□□□ -0.94
CHMP2B-202ENST00000466696 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 IL2RAP01589 272 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 CENPCQ03188 943 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 GAS6Q14393 721 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 DBN1Q16643 649 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 ESCO1Q5FWF5 840 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 XAGE2Q96GT9 111 aa9.18□□□□□ -0.94
CHMP2B-202ENST00000466696 RNF225M0QZC1 329 aaPredicted RBP9.17□□□□□ -0.94
CHMP2B-202ENST00000466696 F11P03951 625 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 MCM6Q14566 821 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 CHIC2Q9UKJ5 165 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 HRH3Q9Y5N1 445 aa9.16□□□□□ -0.94
CHMP2B-202ENST00000466696 SOX11P35716 441 aa9.15□□□□□ -0.94
CHMP2B-202ENST00000466696 GPR25O00155 361 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 SEMA3FQ13275 785 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 MAP7D1Q3KQU3 841 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 GTPBP3Q969Y2 492 aaKnown RBP9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
CHMP2B-202ENST00000466696 MAP3K10Q02779 954 aa9.13□□□□□ -0.95
CHMP2B-202ENST00000466696 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms