RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
SRPRB-202ENST00000466636 LRRC59Q96AG4 307 aaKnown RBP12.39□□□□□ -0.43
SRPRB-202ENST00000466636 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
SRPRB-202ENST00000466636 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
SRPRB-202ENST00000466636 PPP4R2Q9NY27 417 aa12.38□□□□□ -0.43
SRPRB-202ENST00000466636 ERBB3P21860 1342 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 PLIN1O60240 522 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
SRPRB-202ENST00000466636 GNAI1P63096 354 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
SRPRB-202ENST00000466636 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 KIAA0232Q92628 1395 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 CAMTA1Q9Y6Y1 1673 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 CRB1P82279 1406 aa12.37□□□□□ -0.43
SRPRB-202ENST00000466636 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
SRPRB-202ENST00000466636 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
SRPRB-202ENST00000466636 BCAR3O75815 825 aa12.36□□□□□ -0.43
SRPRB-202ENST00000466636 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
SRPRB-202ENST00000466636 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
SRPRB-202ENST00000466636 COL18A1P39060 1754 aa12.35□□□□□ -0.43
SRPRB-202ENST00000466636 CAPN15O75808 1086 aa12.35□□□□□ -0.43
SRPRB-202ENST00000466636 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
SRPRB-202ENST00000466636 MCM10Q7L590 875 aa12.35□□□□□ -0.43
SRPRB-202ENST00000466636 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
SRPRB-202ENST00000466636 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
SRPRB-202ENST00000466636 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
SRPRB-202ENST00000466636 CHL1O00533 1208 aa12.34□□□□□ -0.43
SRPRB-202ENST00000466636 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
SRPRB-202ENST00000466636 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
SRPRB-202ENST00000466636 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
SRPRB-202ENST00000466636 ROBO1Q9Y6N7 1651 aa12.33□□□□□ -0.44
SRPRB-202ENST00000466636 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
SRPRB-202ENST00000466636 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
SRPRB-202ENST00000466636 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
SRPRB-202ENST00000466636 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
SRPRB-202ENST00000466636 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
SRPRB-202ENST00000466636 LRRC37A3O60309 1634 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 VAMP4O75379 141 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 ABCA3Q99758 1704 aa12.31□□□□□ -0.44
SRPRB-202ENST00000466636 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 POLA2Q14181 598 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
SRPRB-202ENST00000466636 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
SRPRB-202ENST00000466636 COL5A2P05997 1499 aaPredicted RBP12.29□□□□□ -0.44
SRPRB-202ENST00000466636 TOM1O60784 492 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 CSB-PGBD3P0DP91 1061 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
SRPRB-202ENST00000466636 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
SRPRB-202ENST00000466636 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
SRPRB-202ENST00000466636 MEGF6O75095 1541 aa12.28□□□□□ -0.44
SRPRB-202ENST00000466636 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
SRPRB-202ENST00000466636 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
SRPRB-202ENST00000466636 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
SRPRB-202ENST00000466636 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
SRPRB-202ENST00000466636 COL16A1Q07092 1604 aaPredicted RBP12.27□□□□□ -0.44
SRPRB-202ENST00000466636 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
SRPRB-202ENST00000466636 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.45
SRPRB-202ENST00000466636 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
SRPRB-202ENST00000466636 FRAT1Q92837 279 aaPredicted RBP12.27□□□□□ -0.45
SRPRB-202ENST00000466636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
SRPRB-202ENST00000466636 OVOS2A0A0G2JMS6 1433 aa12.27□□□□□ -0.45
SRPRB-202ENST00000466636 RGPD2P0DJD1 1756 aa12.26□□□□□ -0.45
SRPRB-202ENST00000466636 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
SRPRB-202ENST00000466636 ZKSCAN2Q63HK3 967 aa12.26□□□□□ -0.45
SRPRB-202ENST00000466636 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
SRPRB-202ENST00000466636 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
SRPRB-202ENST00000466636 TSPYL4Q9UJ04 414 aa12.26□□□□□ -0.45
SRPRB-202ENST00000466636 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
SRPRB-202ENST00000466636 ELL2O00472 640 aaPredicted RBP12.25□□□□□ -0.45
SRPRB-202ENST00000466636 RNMTO43148 476 aaKnown RBP12.25□□□□□ -0.45
SRPRB-202ENST00000466636 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
SRPRB-202ENST00000466636 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
SRPRB-202ENST00000466636 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 PANK1Q8TE04 598 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 MIS18AQ9NYP9 233 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 KIF16BQ96L93 1317 aa12.25□□□□□ -0.45
SRPRB-202ENST00000466636 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 RLBP1P12271 317 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 PIP4K2BP78356 416 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
SRPRB-202ENST00000466636 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
SRPRB-202ENST00000466636 TRIM27P14373 513 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms