RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 VEGFBP49765 207 aa8.82□□□□□ -1
LINC00879-204ENST00000466560 SLC16A10Q8TF71 515 aa8.82□□□□□ -1
LINC00879-204ENST00000466560 INSM2Q96T92 566 aaPredicted RBP8.82□□□□□ -1
LINC00879-204ENST00000466560 ARID3AQ99856 593 aa8.82□□□□□ -1
LINC00879-204ENST00000466560 ALG2Q9H553 416 aa8.82□□□□□ -1
LINC00879-204ENST00000466560 PCDHB11Q9Y5F2 797 aa8.82□□□□□ -1
LINC00879-204ENST00000466560 PTGIRP43119 386 aa8.81□□□□□ -1
LINC00879-204ENST00000466560 CTSOP43234 321 aaPredicted RBP8.81□□□□□ -1
LINC00879-204ENST00000466560 SEMA3FQ13275 785 aa8.81□□□□□ -1
LINC00879-204ENST00000466560 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
LINC00879-204ENST00000466560 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
LINC00879-204ENST00000466560 SOX11P35716 441 aa8.8□□□□□ -1
LINC00879-204ENST00000466560 ERVK-9P63128 1117 aa8.8□□□□□ -1
LINC00879-204ENST00000466560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
LINC00879-204ENST00000466560 LCE2CQ5TA81 110 aa8.8□□□□□ -1
LINC00879-204ENST00000466560 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
LINC00879-204ENST00000466560 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
LINC00879-204ENST00000466560 KDF1Q8NAX2 398 aaPredicted RBP8.8□□□□□ -1
LINC00879-204ENST00000466560 POLMQ9NP87 494 aaPredicted RBP8.8□□□□□ -1
LINC00879-204ENST00000466560 H3BM21 787 aa8.79□□□□□ -1
LINC00879-204ENST00000466560 SCTRP47872 440 aa8.78□□□□□ -1
LINC00879-204ENST00000466560 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
LINC00879-204ENST00000466560 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
LINC00879-204ENST00000466560 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
LINC00879-204ENST00000466560 SERPINA10Q9UK55 444 aa8.77□□□□□ -1.01
LINC00879-204ENST00000466560 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
LINC00879-204ENST00000466560 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
LINC00879-204ENST00000466560 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
LINC00879-204ENST00000466560 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
LINC00879-204ENST00000466560 PPFIA3O75145 1194 aa8.75□□□□□ -1.01
LINC00879-204ENST00000466560 PTSQ03393 145 aa8.75□□□□□ -1.01
LINC00879-204ENST00000466560 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
LINC00879-204ENST00000466560 CYP2U1Q7Z449 544 aa8.75□□□□□ -1.01
LINC00879-204ENST00000466560 IRF7Q92985 503 aa8.75□□□□□ -1.01
LINC00879-204ENST00000466560 MEN1O00255 615 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 RNF135Q8IUD6 432 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 PHTF2Q8N3S3 785 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 UCN2Q96RP3 112 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 OSBPL3Q9H4L5 887 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
LINC00879-204ENST00000466560 A0A1W2PRU2 124 aa8.73□□□□□ -1.01
LINC00879-204ENST00000466560 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
LINC00879-204ENST00000466560 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
LINC00879-204ENST00000466560 DOLKQ9UPQ8 538 aa8.73□□□□□ -1.01
LINC00879-204ENST00000466560 PIK3CDO00329 1044 aa8.72□□□□□ -1.01
LINC00879-204ENST00000466560 WIPF1O43516 503 aa8.72□□□□□ -1.01
LINC00879-204ENST00000466560 GMPRP36959 345 aa8.72□□□□□ -1.01
LINC00879-204ENST00000466560 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
LINC00879-204ENST00000466560 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
LINC00879-204ENST00000466560 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
LINC00879-204ENST00000466560 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.02
LINC00879-204ENST00000466560 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
LINC00879-204ENST00000466560 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
LINC00879-204ENST00000466560 RFX1P22670 979 aa8.7□□□□□ -1.02
LINC00879-204ENST00000466560 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
LINC00879-204ENST00000466560 LYSMD3Q7Z3D4 306 aa8.7□□□□□ -1.02
LINC00879-204ENST00000466560 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
LINC00879-204ENST00000466560 NLRP3Q96P20 1036 aa8.7□□□□□ -1.02
LINC00879-204ENST00000466560 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 SKIP12755 728 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 CLN3Q13286 438 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 PRICKLE2Q7Z3G6 844 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 RAB6BQ9NRW1 208 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
LINC00879-204ENST00000466560 GNRH1P01148 92 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 RHOQP17081 205 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 GPC1P35052 558 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 USP4Q13107 963 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 PLPP7Q8NBV4 271 aa8.68□□□□□ -1.02
LINC00879-204ENST00000466560 SENP3-EIF4A1A0A087X0R7 540 aa8.67□□□□□ -1.02
LINC00879-204ENST00000466560 ATP9BO43861 1147 aa8.67□□□□□ -1.02
LINC00879-204ENST00000466560 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
LINC00879-204ENST00000466560 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
LINC00879-204ENST00000466560 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
LINC00879-204ENST00000466560 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
LINC00879-204ENST00000466560 IL2RAP01589 272 aa8.65□□□□□ -1.02
LINC00879-204ENST00000466560 ITGA6P23229 1130 aa8.65□□□□□ -1.02
LINC00879-204ENST00000466560 INSM1Q01101 510 aaPredicted RBP8.65□□□□□ -1.02
LINC00879-204ENST00000466560 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
LINC00879-204ENST00000466560 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
LINC00879-204ENST00000466560 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
LINC00879-204ENST00000466560 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
LINC00879-204ENST00000466560 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
LINC00879-204ENST00000466560 ESYT1Q9BSJ8 1104 aa8.64□□□□□ -1.03
LINC00879-204ENST00000466560 CDC14CA4D256 554 aa8.63□□□□□ -1.03
LINC00879-204ENST00000466560 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
LINC00879-204ENST00000466560 STAU1O95793 577 aaKnown RBP8.63□□□□□ -1.03
LINC00879-204ENST00000466560 CENPCQ03188 943 aa8.63□□□□□ -1.03
LINC00879-204ENST00000466560 POU4F2Q12837 409 aa8.63□□□□□ -1.03
LINC00879-204ENST00000466560 CDCA8Q53HL2 280 aa8.63□□□□□ -1.03
LINC00879-204ENST00000466560 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
LINC00879-204ENST00000466560 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
LINC00879-204ENST00000466560 ESCO1Q5FWF5 840 aa8.62□□□□□ -1.03
LINC00879-204ENST00000466560 VWA5B2Q8N398 1253 aa8.62□□□□□ -1.03
LINC00879-204ENST00000466560 GPR161Q8N6U8 529 aaKnown RBP8.62□□□□□ -1.03
LINC00879-204ENST00000466560 XAGE2Q96GT9 111 aa8.62□□□□□ -1.03
LINC00879-204ENST00000466560 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
LINC00879-204ENST00000466560 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms