RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 TUBGCP6Q96RT7 1819 aa24.17■■□□□ 1.46
CYTH3-205ENST00000466543 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
CYTH3-205ENST00000466543 PRIM1P49642 420 aaKnown RBP24.16■■□□□ 1.46
CYTH3-205ENST00000466543 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
CYTH3-205ENST00000466543 FHDC1Q9C0D6 1143 aaPredicted RBP24.16■■□□□ 1.46
CYTH3-205ENST00000466543 AKT1S1Q96B36 256 aa24.15■■□□□ 1.46
CYTH3-205ENST00000466543 LY75O60449 1722 aa24.15■■□□□ 1.46
CYTH3-205ENST00000466543 ZCRB1Q8TBF4 217 aaKnown RBP24.14■■□□□ 1.45
CYTH3-205ENST00000466543 SYT17Q9BSW7 474 aa24.14■■□□□ 1.45
CYTH3-205ENST00000466543 QSER1Q2KHR3 1735 aa24.13■■□□□ 1.45
CYTH3-205ENST00000466543 SYTL4Q96C24 671 aaPredicted RBP24.13■■□□□ 1.45
CYTH3-205ENST00000466543 CARD14Q9BXL6 1004 aa24.13■■□□□ 1.45
CYTH3-205ENST00000466543 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
CYTH3-205ENST00000466543 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
CYTH3-205ENST00000466543 COL24A1Q17RW2 1714 aa24.09■■□□□ 1.45
CYTH3-205ENST00000466543 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
CYTH3-205ENST00000466543 INSRP06213 1382 aa24.08■■□□□ 1.45
CYTH3-205ENST00000466543 DCAF8L1A6NGE4 600 aa24.08■■□□□ 1.45
CYTH3-205ENST00000466543 ARXQ96QS3 562 aa24.08■■□□□ 1.45
CYTH3-205ENST00000466543 NSD3Q9BZ95 1437 aa24.06■■□□□ 1.44
CYTH3-205ENST00000466543 FLT4P35916 1363 aa24.05■■□□□ 1.44
CYTH3-205ENST00000466543 SMG6Q86US8 1419 aaKnown RBP24.05■■□□□ 1.44
CYTH3-205ENST00000466543 EMILIN1Q9Y6C2 1016 aa24.05■■□□□ 1.44
CYTH3-205ENST00000466543 GOLGB1Q14789 3259 aaKnown RBP24.04■■□□□ 1.44
CYTH3-205ENST00000466543 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
CYTH3-205ENST00000466543 CDCA8Q53HL2 280 aa24.03■■□□□ 1.44
CYTH3-205ENST00000466543 RAPGEF4Q8WZA2 1011 aa24.03■■□□□ 1.44
CYTH3-205ENST00000466543 ANKRD26Q9UPS8 1709 aa24.03■■□□□ 1.44
CYTH3-205ENST00000466543 CGNL1Q0VF96 1302 aa24.03■■□□□ 1.44
CYTH3-205ENST00000466543 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
CYTH3-205ENST00000466543 KIF24Q5T7B8 1368 aa24.02■■□□□ 1.44
CYTH3-205ENST00000466543 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
CYTH3-205ENST00000466543 TFCP2L1Q9NZI6 479 aa24.01■■□□□ 1.43
CYTH3-205ENST00000466543 CCNL1Q9UK58 526 aaPredicted RBP24.01■■□□□ 1.43
CYTH3-205ENST00000466543 SLC16A10Q8TF71 515 aa24■■□□□ 1.43
CYTH3-205ENST00000466543 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
CYTH3-205ENST00000466543 CYP27B1O15528 508 aa23.99■■□□□ 1.43
CYTH3-205ENST00000466543 NCAPD2Q15021 1401 aa23.99■■□□□ 1.43
CYTH3-205ENST00000466543 C5P01031 1676 aa23.99■■□□□ 1.43
CYTH3-205ENST00000466543 MAP2P11137 1827 aaKnown RBP23.98■■□□□ 1.43
CYTH3-205ENST00000466543 ITGB4P16144 1822 aa23.98■■□□□ 1.43
CYTH3-205ENST00000466543 CHD4Q14839 1912 aa23.98■■□□□ 1.43
CYTH3-205ENST00000466543 TAF1LQ8IZX4 1826 aa23.97■■□□□ 1.43
CYTH3-205ENST00000466543 PCDH11XQ9BZA7 1347 aa23.97■■□□□ 1.43
CYTH3-205ENST00000466543 PCDH11YQ9BZA8 1340 aa23.97■■□□□ 1.43
CYTH3-205ENST00000466543 COL23A1Q86Y22 540 aaPredicted RBP23.96■■□□□ 1.43
CYTH3-205ENST00000466543 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
CYTH3-205ENST00000466543 KLHL34Q8N239 644 aa23.94■■□□□ 1.42
CYTH3-205ENST00000466543 ZNF784Q8NCA9 323 aaPredicted RBP23.94■■□□□ 1.42
CYTH3-205ENST00000466543 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
CYTH3-205ENST00000466543 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
CYTH3-205ENST00000466543 MPRIPQ6WCQ1 1025 aa23.93■■□□□ 1.42
CYTH3-205ENST00000466543 NLGN2Q8NFZ4 835 aa23.93■■□□□ 1.42
CYTH3-205ENST00000466543 PALLDQ8WX93 1383 aa23.92■■□□□ 1.42
CYTH3-205ENST00000466543 POLD1P28340 1107 aa23.92■■□□□ 1.42
CYTH3-205ENST00000466543 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
CYTH3-205ENST00000466543 EYA1Q99502 592 aa23.91■■□□□ 1.42
CYTH3-205ENST00000466543 POLKQ9UBT6 870 aa23.91■■□□□ 1.42
CYTH3-205ENST00000466543 MSL1Q68DK7 614 aa23.9■■□□□ 1.42
CYTH3-205ENST00000466543 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
CYTH3-205ENST00000466543 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.42
CYTH3-205ENST00000466543 C4BP0C0L5 1744 aa23.88■■□□□ 1.41
CYTH3-205ENST00000466543 MSH5O43196 834 aa23.88■■□□□ 1.41
CYTH3-205ENST00000466543 PIGBQ92521 554 aa23.88■■□□□ 1.41
CYTH3-205ENST00000466543 POLR3GLQ9BT43 218 aa23.88■■□□□ 1.41
CYTH3-205ENST00000466543 NKX1-1Q15270 411 aaPredicted RBP23.87■■□□□ 1.41
CYTH3-205ENST00000466543 GPR162Q16538 588 aa23.87■■□□□ 1.41
CYTH3-205ENST00000466543 SMIM5Q71RC9 77 aa23.87■■□□□ 1.41
CYTH3-205ENST00000466543 TNNT2P45379 298 aaPredicted RBP23.85■■□□□ 1.41
CYTH3-205ENST00000466543 UBR3Q6ZT12 1888 aa23.85■■□□□ 1.41
CYTH3-205ENST00000466543 EIF4A2Q14240 407 aaKnown RBP23.83■■□□□ 1.41
CYTH3-205ENST00000466543 PELP1Q8IZL8 1130 aaKnown RBP23.83■■□□□ 1.41
CYTH3-205ENST00000466543 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
CYTH3-205ENST00000466543 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
CYTH3-205ENST00000466543 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.4
CYTH3-205ENST00000466543 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
CYTH3-205ENST00000466543 PHKG2P15735 406 aa23.8■■□□□ 1.4
CYTH3-205ENST00000466543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.8■■□□□ 1.4
CYTH3-205ENST00000466543 ASAP1Q9ULH1 1129 aa23.8■■□□□ 1.4
CYTH3-205ENST00000466543 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
CYTH3-205ENST00000466543 PANK3Q9H999 370 aa23.79■■□□□ 1.4
CYTH3-205ENST00000466543 LOC102724428A0A0B4J2F2 783 aa23.77■■□□□ 1.4
CYTH3-205ENST00000466543 SIK1P57059 783 aa23.77■■□□□ 1.4
CYTH3-205ENST00000466543 EIF4G2P78344 907 aaKnown RBP eCLIP23.77■■□□□ 1.4
CYTH3-205ENST00000466543 ITPK1Q13572 414 aa23.77■■□□□ 1.4
CYTH3-205ENST00000466543 PHF14O94880 888 aa23.76■■□□□ 1.39
CYTH3-205ENST00000466543 IFNL2Q8IZJ0 200 aa23.76■■□□□ 1.39
CYTH3-205ENST00000466543 AK7Q96M32 723 aa23.76■■□□□ 1.39
CYTH3-205ENST00000466543 TMOD3Q9NYL9 352 aa23.76■■□□□ 1.39
CYTH3-205ENST00000466543 IGSF1Q8N6C5 1336 aa23.76■■□□□ 1.39
CYTH3-205ENST00000466543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.75■■□□□ 1.39
CYTH3-205ENST00000466543 FLAD1Q8NFF5 587 aa23.75■■□□□ 1.39
CYTH3-205ENST00000466543 ATG3Q9NT62 314 aa23.74■■□□□ 1.39
CYTH3-205ENST00000466543 KDRP35968 1356 aa23.71■■□□□ 1.39
CYTH3-205ENST00000466543 SLC4A9Q96Q91 983 aa23.71■■□□□ 1.39
CYTH3-205ENST00000466543 CD2APQ9Y5K6 639 aa23.71■■□□□ 1.39
CYTH3-205ENST00000466543 AEBP1Q8IUX7 1158 aa23.7■■□□□ 1.38
CYTH3-205ENST00000466543 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
CYTH3-205ENST00000466543 SSFA2P28290 1259 aa23.69■■□□□ 1.38
CYTH3-205ENST00000466543 ATP6V1AP38606 617 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms