RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 YY1P25490 414 aa18.38■□□□□ 0.53
SRRT-207ENST00000466432 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SRRT-207ENST00000466432 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
SRRT-207ENST00000466432 GGNBP2Q9H3C7 697 aa18.38■□□□□ 0.53
SRRT-207ENST00000466432 AMPHP49418 695 aa18.37■□□□□ 0.53
SRRT-207ENST00000466432 TMF1P82094 1093 aa18.37■□□□□ 0.53
SRRT-207ENST00000466432 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
SRRT-207ENST00000466432 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
SRRT-207ENST00000466432 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
SRRT-207ENST00000466432 FHDC1Q9C0D6 1143 aaPredicted RBP18.36■□□□□ 0.53
SRRT-207ENST00000466432 TIMELESSQ9UNS1 1208 aa18.36■□□□□ 0.53
SRRT-207ENST00000466432 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
SRRT-207ENST00000466432 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
SRRT-207ENST00000466432 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
SRRT-207ENST00000466432 INSRP06213 1382 aa18.35■□□□□ 0.53
SRRT-207ENST00000466432 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
SRRT-207ENST00000466432 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
SRRT-207ENST00000466432 PRIM1P49642 420 aaKnown RBP18.34■□□□□ 0.53
SRRT-207ENST00000466432 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
SRRT-207ENST00000466432 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
SRRT-207ENST00000466432 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
SRRT-207ENST00000466432 PNPLA7Q6ZV29 1317 aa18.33■□□□□ 0.53
SRRT-207ENST00000466432 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.52
SRRT-207ENST00000466432 KCNQ4P56696 695 aa18.32■□□□□ 0.52
SRRT-207ENST00000466432 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SRRT-207ENST00000466432 USHBP1Q8N6Y0 703 aa18.32■□□□□ 0.52
SRRT-207ENST00000466432 FLT4P35916 1363 aa18.31■□□□□ 0.52
SRRT-207ENST00000466432 ITGB4P16144 1822 aa18.31■□□□□ 0.52
SRRT-207ENST00000466432 CHD4Q14839 1912 aa18.31■□□□□ 0.52
SRRT-207ENST00000466432 C5P01031 1676 aa18.31■□□□□ 0.52
SRRT-207ENST00000466432 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
SRRT-207ENST00000466432 ARXQ96QS3 562 aa18.3■□□□□ 0.52
SRRT-207ENST00000466432 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
SRRT-207ENST00000466432 UTRNP46939 3433 aa18.3■□□□□ 0.52
SRRT-207ENST00000466432 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
SRRT-207ENST00000466432 SMG6Q86US8 1419 aaKnown RBP18.29■□□□□ 0.52
SRRT-207ENST00000466432 CDCA8Q53HL2 280 aa18.28■□□□□ 0.52
SRRT-207ENST00000466432 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
SRRT-207ENST00000466432 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
SRRT-207ENST00000466432 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
SRRT-207ENST00000466432 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
SRRT-207ENST00000466432 CYP27B1O15528 508 aa18.25■□□□□ 0.51
SRRT-207ENST00000466432 RAPGEF4Q8WZA2 1011 aa18.25■□□□□ 0.51
SRRT-207ENST00000466432 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
SRRT-207ENST00000466432 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
SRRT-207ENST00000466432 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
SRRT-207ENST00000466432 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
SRRT-207ENST00000466432 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
SRRT-207ENST00000466432 C4BP0C0L5 1744 aa18.22■□□□□ 0.51
SRRT-207ENST00000466432 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
SRRT-207ENST00000466432 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
SRRT-207ENST00000466432 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SRRT-207ENST00000466432 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
SRRT-207ENST00000466432 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
SRRT-207ENST00000466432 ZNF784Q8NCA9 323 aaPredicted RBP18.2■□□□□ 0.5
SRRT-207ENST00000466432 GOLGB1Q14789 3259 aaKnown RBP18.18■□□□□ 0.5
SRRT-207ENST00000466432 NLGN2Q8NFZ4 835 aa18.18■□□□□ 0.5
SRRT-207ENST00000466432 EYA1Q99502 592 aa18.18■□□□□ 0.5
SRRT-207ENST00000466432 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
SRRT-207ENST00000466432 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
SRRT-207ENST00000466432 POLD1P28340 1107 aa18.16■□□□□ 0.5
SRRT-207ENST00000466432 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
SRRT-207ENST00000466432 PIGBQ92521 554 aa18.15■□□□□ 0.5
SRRT-207ENST00000466432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
SRRT-207ENST00000466432 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRRT-207ENST00000466432 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
SRRT-207ENST00000466432 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
SRRT-207ENST00000466432 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
SRRT-207ENST00000466432 EIF4A2Q14240 407 aaKnown RBP18.12■□□□□ 0.49
SRRT-207ENST00000466432 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
SRRT-207ENST00000466432 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SRRT-207ENST00000466432 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
SRRT-207ENST00000466432 KLHL34Q8N239 644 aa18.11■□□□□ 0.49
SRRT-207ENST00000466432 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
SRRT-207ENST00000466432 PHKG2P15735 406 aa18.1■□□□□ 0.49
SRRT-207ENST00000466432 YBX3P16989 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
SRRT-207ENST00000466432 GPR162Q16538 588 aa18.1■□□□□ 0.49
SRRT-207ENST00000466432 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
SRRT-207ENST00000466432 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
SRRT-207ENST00000466432 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
SRRT-207ENST00000466432 KDRP35968 1356 aa18.09■□□□□ 0.49
SRRT-207ENST00000466432 SMIM5Q71RC9 77 aa18.09■□□□□ 0.49
SRRT-207ENST00000466432 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
SRRT-207ENST00000466432 FLAD1Q8NFF5 587 aa18.08■□□□□ 0.48
SRRT-207ENST00000466432 KIAA1551Q9HCM1 1747 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 MSH5O43196 834 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 SIK1P57059 783 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 ITPK1Q13572 414 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
SRRT-207ENST00000466432 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
SRRT-207ENST00000466432 PANK3Q9H999 370 aa18.06■□□□□ 0.48
SRRT-207ENST00000466432 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
SRRT-207ENST00000466432 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
SRRT-207ENST00000466432 HMGB2P26583 209 aaKnown RBP18.05■□□□□ 0.48
SRRT-207ENST00000466432 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
SRRT-207ENST00000466432 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
SRRT-207ENST00000466432 CD2APQ9Y5K6 639 aa18.05■□□□□ 0.48
SRRT-207ENST00000466432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
SRRT-207ENST00000466432 AK7Q96M32 723 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms