RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-203ENST00000466034 PDGFDQ9GZP0 370 aaPredicted RBP17.36■□□□□ 0.37
SOX2-OT-203ENST00000466034 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
SOX2-OT-203ENST00000466034 INSRP06213 1382 aa17.36■□□□□ 0.37
SOX2-OT-203ENST00000466034 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-203ENST00000466034 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 FLT4P35916 1363 aa17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
SOX2-OT-203ENST00000466034 PTGER2P43116 358 aa17.34■□□□□ 0.37
SOX2-OT-203ENST00000466034 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.37
SOX2-OT-203ENST00000466034 ZBTB7AO95365 584 aa17.33■□□□□ 0.36
SOX2-OT-203ENST00000466034 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
SOX2-OT-203ENST00000466034 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.36
SOX2-OT-203ENST00000466034 NSD2O96028 1365 aa17.32■□□□□ 0.36
SOX2-OT-203ENST00000466034 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
SOX2-OT-203ENST00000466034 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
SOX2-OT-203ENST00000466034 QSER1Q2KHR3 1735 aa17.32■□□□□ 0.36
SOX2-OT-203ENST00000466034 ANKRD26Q9UPS8 1709 aa17.31■□□□□ 0.36
SOX2-OT-203ENST00000466034 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
SOX2-OT-203ENST00000466034 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
SOX2-OT-203ENST00000466034 LY75O60449 1722 aa17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
SOX2-OT-203ENST00000466034 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
SOX2-OT-203ENST00000466034 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
SOX2-OT-203ENST00000466034 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
SOX2-OT-203ENST00000466034 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
SOX2-OT-203ENST00000466034 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
SOX2-OT-203ENST00000466034 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
SOX2-OT-203ENST00000466034 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 COL24A1Q17RW2 1714 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 PKD1L3Q7Z443 1732 aa17.26■□□□□ 0.35
SOX2-OT-203ENST00000466034 WASHC2AQ641Q2 1341 aa17.25■□□□□ 0.35
SOX2-OT-203ENST00000466034 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
SOX2-OT-203ENST00000466034 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
SOX2-OT-203ENST00000466034 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
SOX2-OT-203ENST00000466034 MAP3K5Q99683 1374 aa17.24■□□□□ 0.35
SOX2-OT-203ENST00000466034 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 CYP27B1O15528 508 aa17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
SOX2-OT-203ENST00000466034 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
SOX2-OT-203ENST00000466034 YY1P25490 414 aa17.21■□□□□ 0.35
SOX2-OT-203ENST00000466034 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
SOX2-OT-203ENST00000466034 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
SOX2-OT-203ENST00000466034 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
SOX2-OT-203ENST00000466034 UTRNP46939 3433 aa17.2■□□□□ 0.34
SOX2-OT-203ENST00000466034 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
SOX2-OT-203ENST00000466034 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
SOX2-OT-203ENST00000466034 TFCP2L1Q9NZI6 479 aa17.2■□□□□ 0.34
SOX2-OT-203ENST00000466034 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 KCNQ4P56696 695 aa17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 EYA1Q99502 592 aa17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 ITGB4P16144 1822 aa17.19■□□□□ 0.34
SOX2-OT-203ENST00000466034 C5P01031 1676 aa17.18■□□□□ 0.34
SOX2-OT-203ENST00000466034 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-203ENST00000466034 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
SOX2-OT-203ENST00000466034 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
SOX2-OT-203ENST00000466034 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
SOX2-OT-203ENST00000466034 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
SOX2-OT-203ENST00000466034 POLD1P28340 1107 aa17.16■□□□□ 0.34
SOX2-OT-203ENST00000466034 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
SOX2-OT-203ENST00000466034 PANK3Q9H999 370 aa17.16■□□□□ 0.34
SOX2-OT-203ENST00000466034 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SOX2-OT-203ENST00000466034 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
SOX2-OT-203ENST00000466034 PIGBQ92521 554 aa17.13■□□□□ 0.33
SOX2-OT-203ENST00000466034 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
SOX2-OT-203ENST00000466034 PHKG2P15735 406 aa17.12■□□□□ 0.33
SOX2-OT-203ENST00000466034 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
SOX2-OT-203ENST00000466034 IFNL2Q8IZJ0 200 aa17.12■□□□□ 0.33
SOX2-OT-203ENST00000466034 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
SOX2-OT-203ENST00000466034 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
SOX2-OT-203ENST00000466034 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
SOX2-OT-203ENST00000466034 CHD4Q14839 1912 aa17.11■□□□□ 0.33
SOX2-OT-203ENST00000466034 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
SOX2-OT-203ENST00000466034 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.33
SOX2-OT-203ENST00000466034 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
SOX2-OT-203ENST00000466034 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
SOX2-OT-203ENST00000466034 SIK1P57059 783 aa17.06■□□□□ 0.32
SOX2-OT-203ENST00000466034 AK7Q96M32 723 aa17.06■□□□□ 0.32
SOX2-OT-203ENST00000466034 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
SOX2-OT-203ENST00000466034 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
SOX2-OT-203ENST00000466034 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
SOX2-OT-203ENST00000466034 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
SOX2-OT-203ENST00000466034 GOLGB1Q14789 3259 aaKnown RBP17.04■□□□□ 0.32
SOX2-OT-203ENST00000466034 SSFA2P28290 1259 aa17.04■□□□□ 0.32
SOX2-OT-203ENST00000466034 GPR162Q16538 588 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms