RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 PRIM1P49642 420 aaKnown RBP17.32■□□□□ 0.36
PHC3-201ENST00000465896 C1QTNF8P60827 252 aa17.32■□□□□ 0.36
PHC3-201ENST00000465896 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
PHC3-201ENST00000465896 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
PHC3-201ENST00000465896 SLC27A3Q5K4L6 730 aa17.31■□□□□ 0.36
PHC3-201ENST00000465896 C5P01031 1676 aa17.31■□□□□ 0.36
PHC3-201ENST00000465896 SLC16A10Q8TF71 515 aa17.3■□□□□ 0.36
PHC3-201ENST00000465896 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
PHC3-201ENST00000465896 YBX3P16989 372 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHC3-201ENST00000465896 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
PHC3-201ENST00000465896 ITGB4P16144 1822 aa17.27■□□□□ 0.36
PHC3-201ENST00000465896 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
PHC3-201ENST00000465896 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
PHC3-201ENST00000465896 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
PHC3-201ENST00000465896 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
PHC3-201ENST00000465896 GPR162Q16538 588 aa17.26■□□□□ 0.35
PHC3-201ENST00000465896 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
PHC3-201ENST00000465896 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
PHC3-201ENST00000465896 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
PHC3-201ENST00000465896 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
PHC3-201ENST00000465896 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
PHC3-201ENST00000465896 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
PHC3-201ENST00000465896 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
PHC3-201ENST00000465896 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
PHC3-201ENST00000465896 KIF20BQ96Q89 1820 aa17.25■□□□□ 0.35
PHC3-201ENST00000465896 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
PHC3-201ENST00000465896 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
PHC3-201ENST00000465896 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
PHC3-201ENST00000465896 CCNL1Q9UK58 526 aaPredicted RBP17.23■□□□□ 0.35
PHC3-201ENST00000465896 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
PHC3-201ENST00000465896 FYB1O15117 783 aa17.22■□□□□ 0.35
PHC3-201ENST00000465896 POLD1P28340 1107 aa17.22■□□□□ 0.35
PHC3-201ENST00000465896 COG3Q96JB2 828 aa17.22■□□□□ 0.35
PHC3-201ENST00000465896 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
PHC3-201ENST00000465896 AMPHP49418 695 aa17.21■□□□□ 0.35
PHC3-201ENST00000465896 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
PHC3-201ENST00000465896 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
PHC3-201ENST00000465896 GGNBP2Q9H3C7 697 aa17.2■□□□□ 0.34
PHC3-201ENST00000465896 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
PHC3-201ENST00000465896 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
PHC3-201ENST00000465896 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
PHC3-201ENST00000465896 USP47Q96K76 1375 aa17.18■□□□□ 0.34
PHC3-201ENST00000465896 CYP27B1O15528 508 aa17.18■□□□□ 0.34
PHC3-201ENST00000465896 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
PHC3-201ENST00000465896 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
PHC3-201ENST00000465896 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
PHC3-201ENST00000465896 ADCY9O60503 1353 aa17.16■□□□□ 0.34
PHC3-201ENST00000465896 INSRP06213 1382 aa17.16■□□□□ 0.34
PHC3-201ENST00000465896 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
PHC3-201ENST00000465896 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
PHC3-201ENST00000465896 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
PHC3-201ENST00000465896 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
PHC3-201ENST00000465896 CARD14Q9BXL6 1004 aa17.13■□□□□ 0.33
PHC3-201ENST00000465896 MSH5O43196 834 aa17.12■□□□□ 0.33
PHC3-201ENST00000465896 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
PHC3-201ENST00000465896 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
PHC3-201ENST00000465896 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
PHC3-201ENST00000465896 FLT4P35916 1363 aa17.12■□□□□ 0.33
PHC3-201ENST00000465896 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
PHC3-201ENST00000465896 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
PHC3-201ENST00000465896 RAPGEF4Q8WZA2 1011 aa17.11■□□□□ 0.33
PHC3-201ENST00000465896 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
PHC3-201ENST00000465896 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
PHC3-201ENST00000465896 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
PHC3-201ENST00000465896 PIGBQ92521 554 aa17.1■□□□□ 0.33
PHC3-201ENST00000465896 SMG6Q86US8 1419 aaKnown RBP17.1■□□□□ 0.33
PHC3-201ENST00000465896 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
PHC3-201ENST00000465896 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
PHC3-201ENST00000465896 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
PHC3-201ENST00000465896 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
PHC3-201ENST00000465896 ITPK1Q13572 414 aa17.07■□□□□ 0.32
PHC3-201ENST00000465896 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
PHC3-201ENST00000465896 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
PHC3-201ENST00000465896 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
PHC3-201ENST00000465896 COL5A3P25940 1745 aaPredicted RBP17.05■□□□□ 0.32
PHC3-201ENST00000465896 IGSF1Q8N6C5 1336 aa17.05■□□□□ 0.32
PHC3-201ENST00000465896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
PHC3-201ENST00000465896 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
PHC3-201ENST00000465896 PHF14O94880 888 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 TMF1P82094 1093 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 EYA1Q99502 592 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
PHC3-201ENST00000465896 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
PHC3-201ENST00000465896 SIK1P57059 783 aa17.03■□□□□ 0.32
PHC3-201ENST00000465896 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
PHC3-201ENST00000465896 KDRP35968 1356 aa17.02■□□□□ 0.32
PHC3-201ENST00000465896 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.32
PHC3-201ENST00000465896 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
PHC3-201ENST00000465896 AK7Q96M32 723 aa17.02■□□□□ 0.32
PHC3-201ENST00000465896 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
PHC3-201ENST00000465896 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
PHC3-201ENST00000465896 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
PHC3-201ENST00000465896 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
PHC3-201ENST00000465896 KIF3CO14782 793 aa17■□□□□ 0.31
PHC3-201ENST00000465896 SLC24A1O60721 1099 aa17■□□□□ 0.31
PHC3-201ENST00000465896 SSFA2P28290 1259 aa17■□□□□ 0.31
PHC3-201ENST00000465896 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms