RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 UGGT2Q9NYU1 1516 aa8.06□□□□□ -1.12
EXOSC3-204ENST00000465860 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
EXOSC3-204ENST00000465860 KIAA0556O60303 1618 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 WIPF1O43516 503 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 VEGFBP49765 207 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
EXOSC3-204ENST00000465860 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
EXOSC3-204ENST00000465860 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
EXOSC3-204ENST00000465860 EMILIN1Q9Y6C2 1016 aa8.04□□□□□ -1.12
EXOSC3-204ENST00000465860 BRPF1P55201 1214 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-204ENST00000465860 PTK2Q05397 1052 aa8.03□□□□□ -1.12
EXOSC3-204ENST00000465860 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
EXOSC3-204ENST00000465860 SLC16A10Q8TF71 515 aa8.03□□□□□ -1.12
EXOSC3-204ENST00000465860 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
EXOSC3-204ENST00000465860 BMP2P12643 396 aa8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 PPP1R26Q5T8A7 1209 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 NPAS3Q8IXF0 933 aa8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 ADAM32Q8TC27 787 aa8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 GPSM3Q9Y4H4 160 aa8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 PTPRGP23470 1445 aa8.02□□□□□ -1.13
EXOSC3-204ENST00000465860 TNIKQ9UKE5 1360 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 KIF21BO75037 1637 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 H3BM21 787 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 UPP2O95045 317 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 CDV3Q9UKY7 258 aaKnown RBP8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 EEA1Q15075 1411 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 CARMIL2Q6F5E8 1435 aa8.01□□□□□ -1.13
EXOSC3-204ENST00000465860 CBLBQ13191 982 aa8□□□□□ -1.13
EXOSC3-204ENST00000465860 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
EXOSC3-204ENST00000465860 SAMD9Q5K651 1589 aa8□□□□□ -1.13
EXOSC3-204ENST00000465860 ABCC2Q92887 1545 aa7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 MAN1A2O60476 641 aa7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 TMEM259Q4ZIN3 620 aa7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 TSEN34Q9BSV6 310 aaKnown RBP7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 SOS2Q07890 1332 aaPredicted RBP7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 ERBB4Q15303 1308 aa7.99□□□□□ -1.13
EXOSC3-204ENST00000465860 DIP2BQ9P265 1576 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 GMPRP36959 345 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 INSM1Q01101 510 aaPredicted RBP7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 Q6ZVU0 165 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 IRF7Q92985 503 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 ZCCHC11Q5TAX3 1644 aaKnown RBP7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 PLB1Q6P1J6 1458 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 MAPKBP1O60336 1514 aa7.98□□□□□ -1.13
EXOSC3-204ENST00000465860 UACAQ9BZF9 1416 aa7.97□□□□□ -1.13
EXOSC3-204ENST00000465860 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
EXOSC3-204ENST00000465860 GJD4Q96KN9 370 aaPredicted RBP7.97□□□□□ -1.13
EXOSC3-204ENST00000465860 DNMT3LQ9UJW3 386 aa7.97□□□□□ -1.13
EXOSC3-204ENST00000465860 ABCA8O94911 1581 aa7.97□□□□□ -1.13
EXOSC3-204ENST00000465860 TSPOAP1O95153 1857 aa7.96□□□□□ -1.13
EXOSC3-204ENST00000465860 UHRF1BP1LA0JNW5 1464 aa7.96□□□□□ -1.13
EXOSC3-204ENST00000465860 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.14
EXOSC3-204ENST00000465860 DHX9Q08211 1270 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-204ENST00000465860 ABCC10Q5T3U5 1492 aa7.95□□□□□ -1.14
EXOSC3-204ENST00000465860 KDM5BQ9UGL1 1544 aa7.95□□□□□ -1.14
EXOSC3-204ENST00000465860 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
EXOSC3-204ENST00000465860 DZIP3Q86Y13 1208 aaKnown RBP7.95□□□□□ -1.14
EXOSC3-204ENST00000465860 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
EXOSC3-204ENST00000465860 GOLGA3Q08378 1498 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 SPINT1O43278 529 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 RAB15P59190 212 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 FHOD3Q2V2M9 1422 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 ASXL2Q76L83 1435 aa7.94□□□□□ -1.14
EXOSC3-204ENST00000465860 PPRC1Q5VV67 1664 aaKnown RBP7.93□□□□□ -1.14
EXOSC3-204ENST00000465860 TTLL8A6PVC2 850 aa7.93□□□□□ -1.14
EXOSC3-204ENST00000465860 ESPNB1AK53 854 aa7.93□□□□□ -1.14
EXOSC3-204ENST00000465860 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 ERVH48-1M5A8F1 160 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 VSIG8P0DPA2 414 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 FAM69CQ0P6D2 419 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 RAPGEF6Q8TEU7 1601 aa7.92□□□□□ -1.14
EXOSC3-204ENST00000465860 ARID3CA6NKF2 412 aa7.91□□□□□ -1.14
EXOSC3-204ENST00000465860 ZBBXA8MT70 800 aa7.91□□□□□ -1.14
EXOSC3-204ENST00000465860 FBXO45P0C2W1 286 aa7.91□□□□□ -1.14
EXOSC3-204ENST00000465860 RELBQ01201 579 aa7.91□□□□□ -1.14
EXOSC3-204ENST00000465860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
EXOSC3-204ENST00000465860 LRRIQ1Q96JM4 1722 aa7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 EPRSP07814 1512 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 ARHGAP35Q9NRY4 1499 aa7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 LILRA1O75019 489 aa7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 UBTFP17480 764 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-204ENST00000465860 MAP3K4Q9Y6R4 1608 aa7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 ATP10BO94823 1461 aa7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 GPR37L1O60883 481 aa7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 MTMR14Q8NCE2 650 aa7.89□□□□□ -1.15
EXOSC3-204ENST00000465860 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms