RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PCDHB11Q9Y5F2 797 aa12.06□□□□□ -0.48
SMC4-205ENST00000465563 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
SMC4-205ENST00000465563 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
SMC4-205ENST00000465563 MEN1O00255 615 aa12.04□□□□□ -0.48
SMC4-205ENST00000465563 VWA5B2Q8N398 1253 aa12.04□□□□□ -0.48
SMC4-205ENST00000465563 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
SMC4-205ENST00000465563 A0A1W2PRU2 124 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 CDC14CA4D256 554 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 SCTRP47872 440 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 SV2AQ7L0J3 742 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 PRICKLE2Q7Z3G6 844 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 CYP2U1Q7Z449 544 aa12.03□□□□□ -0.48
SMC4-205ENST00000465563 GPC1P35052 558 aa12.02□□□□□ -0.49
SMC4-205ENST00000465563 KRT76Q01546 638 aa12.02□□□□□ -0.49
SMC4-205ENST00000465563 CNTNAP3BQ96NU0 1288 aa12.02□□□□□ -0.49
SMC4-205ENST00000465563 COL25A1Q9BXS0 654 aaPredicted RBP12.02□□□□□ -0.49
SMC4-205ENST00000465563 CNTNAP3Q9BZ76 1288 aa12.02□□□□□ -0.49
SMC4-205ENST00000465563 CEP126Q9P2H0 1117 aa12.01□□□□□ -0.49
SMC4-205ENST00000465563 NLRP3Q96P20 1036 aa12□□□□□ -0.49
SMC4-205ENST00000465563 RHOQP17081 205 aa11.99□□□□□ -0.49
SMC4-205ENST00000465563 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMC4-205ENST00000465563 OSBPL3Q9H4L5 887 aa11.99□□□□□ -0.49
SMC4-205ENST00000465563 TRAK2O60296 914 aa11.98□□□□□ -0.49
SMC4-205ENST00000465563 CLN3Q13286 438 aa11.98□□□□□ -0.49
SMC4-205ENST00000465563 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
SMC4-205ENST00000465563 SLC27A3Q5K4L6 730 aa11.97□□□□□ -0.49
SMC4-205ENST00000465563 RNFT1Q5M7Z0 435 aa11.97□□□□□ -0.49
SMC4-205ENST00000465563 IRF5Q13568 498 aa11.96□□□□□ -0.49
SMC4-205ENST00000465563 ARHGEF10LQ9HCE6 1279 aa11.96□□□□□ -0.49
SMC4-205ENST00000465563 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
SMC4-205ENST00000465563 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
SMC4-205ENST00000465563 GNRH1P01148 92 aa11.94□□□□□ -0.5
SMC4-205ENST00000465563 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
SMC4-205ENST00000465563 GRIP2Q9C0E4 1043 aa11.94□□□□□ -0.5
SMC4-205ENST00000465563 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
SMC4-205ENST00000465563 POU4F2Q12837 409 aa11.93□□□□□ -0.5
SMC4-205ENST00000465563 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
SMC4-205ENST00000465563 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
SMC4-205ENST00000465563 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
SMC4-205ENST00000465563 ABL2P42684 1182 aa11.91□□□□□ -0.5
SMC4-205ENST00000465563 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
SMC4-205ENST00000465563 RAB6BQ9NRW1 208 aa11.91□□□□□ -0.5
SMC4-205ENST00000465563 VAC14Q08AM6 782 aa11.9□□□□□ -0.5
SMC4-205ENST00000465563 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
SMC4-205ENST00000465563 RIPOR1Q6ZS17 1223 aa11.9□□□□□ -0.5
SMC4-205ENST00000465563 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
SMC4-205ENST00000465563 PHTF2Q8N3S3 785 aa11.9□□□□□ -0.5
SMC4-205ENST00000465563 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
SMC4-205ENST00000465563 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 WDR44Q5JSH3 913 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 DOLKQ9UPQ8 538 aa11.89□□□□□ -0.51
SMC4-205ENST00000465563 USP4Q13107 963 aa11.88□□□□□ -0.51
SMC4-205ENST00000465563 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
SMC4-205ENST00000465563 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
SMC4-205ENST00000465563 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
SMC4-205ENST00000465563 ZNF837Q96EG3 531 aaPredicted RBP11.88□□□□□ -0.51
SMC4-205ENST00000465563 GAS2L1Q99501 681 aaPredicted RBP11.88□□□□□ -0.51
SMC4-205ENST00000465563 H7C1W4 665 aa11.87□□□□□ -0.51
SMC4-205ENST00000465563 IL2RAP01589 272 aa11.87□□□□□ -0.51
SMC4-205ENST00000465563 CENPCQ03188 943 aa11.87□□□□□ -0.51
SMC4-205ENST00000465563 MCM6Q14566 821 aa11.87□□□□□ -0.51
SMC4-205ENST00000465563 TAS1R3Q7RTX0 852 aa11.87□□□□□ -0.51
SMC4-205ENST00000465563 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
SMC4-205ENST00000465563 DBN1Q16643 649 aa11.86□□□□□ -0.51
SMC4-205ENST00000465563 ZNF385CQ66K41 422 aaPredicted RBP11.86□□□□□ -0.51
SMC4-205ENST00000465563 SVOPQ8N4V2 548 aa11.86□□□□□ -0.51
SMC4-205ENST00000465563 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
SMC4-205ENST00000465563 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
SMC4-205ENST00000465563 XAGE2Q96GT9 111 aa11.85□□□□□ -0.51
SMC4-205ENST00000465563 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
SMC4-205ENST00000465563 ADAMTS2O95450 1211 aa11.84□□□□□ -0.51
SMC4-205ENST00000465563 SRSF11Q05519 484 aaKnown RBP11.84□□□□□ -0.51
SMC4-205ENST00000465563 GAS6Q14393 721 aa11.84□□□□□ -0.51
SMC4-205ENST00000465563 WHAMMQ8TF30 809 aa11.84□□□□□ -0.51
SMC4-205ENST00000465563 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
SMC4-205ENST00000465563 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
SMC4-205ENST00000465563 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
SMC4-205ENST00000465563 GTF2E1P29083 439 aaPredicted RBP11.83□□□□□ -0.52
SMC4-205ENST00000465563 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
SMC4-205ENST00000465563 HRH3Q9Y5N1 445 aa11.83□□□□□ -0.52
SMC4-205ENST00000465563 F11P03951 625 aa11.82□□□□□ -0.52
SMC4-205ENST00000465563 SOX11P35716 441 aa11.82□□□□□ -0.52
SMC4-205ENST00000465563 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
SMC4-205ENST00000465563 GPR25O00155 361 aa11.81□□□□□ -0.52
SMC4-205ENST00000465563 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
SMC4-205ENST00000465563 GTPBP3Q969Y2 492 aaKnown RBP11.81□□□□□ -0.52
SMC4-205ENST00000465563 MAP7D1Q3KQU3 841 aa11.8□□□□□ -0.52
SMC4-205ENST00000465563 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
SMC4-205ENST00000465563 TMEM214Q6NUQ4 689 aaKnown RBP11.8□□□□□ -0.52
SMC4-205ENST00000465563 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
SMC4-205ENST00000465563 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
SMC4-205ENST00000465563 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
SMC4-205ENST00000465563 PHKA2P46019 1235 aa11.79□□□□□ -0.52
SMC4-205ENST00000465563 ETNK1Q9HBU6 452 aa11.79□□□□□ -0.52
SMC4-205ENST00000465563 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
SMC4-205ENST00000465563 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms