RNA–Protein interactions for RNA: ENST00000465552.1

CTNNB1-211, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-211ENST00000465552 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
CTNNB1-211ENST00000465552 PPM1GO15355 546 aaPredicted RBP13.63□□□□□ -0.23
CTNNB1-211ENST00000465552 CARD10Q9BWT7 1032 aa13.63□□□□□ -0.23
CTNNB1-211ENST00000465552 NSD2O96028 1365 aa13.62□□□□□ -0.23
CTNNB1-211ENST00000465552 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
CTNNB1-211ENST00000465552 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
CTNNB1-211ENST00000465552 RGPD3A6NKT7 1758 aaPredicted RBP13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 RGPD4Q7Z3J3 1758 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 MEGF6O75095 1541 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 DDB1Q16531 1140 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
CTNNB1-211ENST00000465552 INSRP06213 1382 aa13.6□□□□□ -0.23
CTNNB1-211ENST00000465552 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
CTNNB1-211ENST00000465552 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
CTNNB1-211ENST00000465552 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
CTNNB1-211ENST00000465552 IL2RBP14784 551 aa13.58□□□□□ -0.24
CTNNB1-211ENST00000465552 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
CTNNB1-211ENST00000465552 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
CTNNB1-211ENST00000465552 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
CTNNB1-211ENST00000465552 TRIM37O94972 964 aa13.57□□□□□ -0.24
CTNNB1-211ENST00000465552 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
CTNNB1-211ENST00000465552 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
CTNNB1-211ENST00000465552 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
CTNNB1-211ENST00000465552 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
CTNNB1-211ENST00000465552 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
CTNNB1-211ENST00000465552 EXOC5O00471 708 aa13.55□□□□□ -0.24
CTNNB1-211ENST00000465552 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
CTNNB1-211ENST00000465552 FAM196AQ6ZSG2 479 aa13.55□□□□□ -0.24
CTNNB1-211ENST00000465552 MARCH10Q8NA82 808 aaPredicted RBP13.55□□□□□ -0.24
CTNNB1-211ENST00000465552 CCDC125Q86Z20 511 aa13.54□□□□□ -0.24
CTNNB1-211ENST00000465552 LY75O60449 1722 aa13.53□□□□□ -0.24
CTNNB1-211ENST00000465552 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
CTNNB1-211ENST00000465552 BAG6P46379 1132 aa13.53□□□□□ -0.24
CTNNB1-211ENST00000465552 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 EIF4A2Q14240 407 aaKnown RBP13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
CTNNB1-211ENST00000465552 PTF1AQ7RTS3 328 aa13.51□□□□□ -0.25
CTNNB1-211ENST00000465552 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
CTNNB1-211ENST00000465552 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
CTNNB1-211ENST00000465552 APBA3O96018 575 aa13.5□□□□□ -0.25
CTNNB1-211ENST00000465552 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
CTNNB1-211ENST00000465552 EZH2Q15910 746 aaKnown RBP13.5□□□□□ -0.25
CTNNB1-211ENST00000465552 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
CTNNB1-211ENST00000465552 EYA1Q99502 592 aa13.5□□□□□ -0.25
CTNNB1-211ENST00000465552 DLG5Q8TDM6 1919 aa13.49□□□□□ -0.25
CTNNB1-211ENST00000465552 COL3A1P02461 1466 aaPredicted RBP13.48□□□□□ -0.25
CTNNB1-211ENST00000465552 NPC1L1Q9UHC9 1359 aa13.48□□□□□ -0.25
CTNNB1-211ENST00000465552 C5P01031 1676 aa13.48□□□□□ -0.25
CTNNB1-211ENST00000465552 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
CTNNB1-211ENST00000465552 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
CTNNB1-211ENST00000465552 BCL9O00512 1426 aa13.47□□□□□ -0.25
CTNNB1-211ENST00000465552 KCNQ2O43526 872 aa13.47□□□□□ -0.25
CTNNB1-211ENST00000465552 MTHFSP49914 203 aa13.47□□□□□ -0.25
CTNNB1-211ENST00000465552 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
CTNNB1-211ENST00000465552 PCDH11XQ9BZA7 1347 aa13.45□□□□□ -0.26
CTNNB1-211ENST00000465552 PCDH11YQ9BZA8 1340 aa13.45□□□□□ -0.26
CTNNB1-211ENST00000465552 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
CTNNB1-211ENST00000465552 PAPPAQ13219 1627 aa13.45□□□□□ -0.26
CTNNB1-211ENST00000465552 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
CTNNB1-211ENST00000465552 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
CTNNB1-211ENST00000465552 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
CTNNB1-211ENST00000465552 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
CTNNB1-211ENST00000465552 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
CTNNB1-211ENST00000465552 CASZ1Q86V15 1759 aa13.43□□□□□ -0.26
CTNNB1-211ENST00000465552 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
CTNNB1-211ENST00000465552 CYP27B1O15528 508 aa13.42□□□□□ -0.26
CTNNB1-211ENST00000465552 IL13P35225 146 aa13.42□□□□□ -0.26
CTNNB1-211ENST00000465552 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
CTNNB1-211ENST00000465552 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-211ENST00000465552 PARD3Q8TEW0 1356 aa13.42□□□□□ -0.26
CTNNB1-211ENST00000465552 HMOX1P09601 288 aa13.41□□□□□ -0.26
CTNNB1-211ENST00000465552 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-211ENST00000465552 PPP2R1AP30153 589 aa13.4□□□□□ -0.26
CTNNB1-211ENST00000465552 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
CTNNB1-211ENST00000465552 LRP5O75197 1615 aa13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 KDRP35968 1356 aa13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
CTNNB1-211ENST00000465552 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
CTNNB1-211ENST00000465552 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
CTNNB1-211ENST00000465552 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
CTNNB1-211ENST00000465552 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
CTNNB1-211ENST00000465552 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
CTNNB1-211ENST00000465552 PLSCR1O15162 318 aa13.37□□□□□ -0.27
CTNNB1-211ENST00000465552 PHKG2P15735 406 aa13.37□□□□□ -0.27
CTNNB1-211ENST00000465552 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
CTNNB1-211ENST00000465552 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
CTNNB1-211ENST00000465552 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
CTNNB1-211ENST00000465552 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
CTNNB1-211ENST00000465552 TJP1Q07157 1748 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms