RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 MTFR1LQ9H019 292 aa28.97■■■□□ 2.23
CSPG5-204ENST00000465441 INSRP06213 1382 aa28.97■■■□□ 2.23
CSPG5-204ENST00000465441 NSD3Q9BZ95 1437 aa28.96■■■□□ 2.23
CSPG5-204ENST00000465441 RAPGEF4Q8WZA2 1011 aa28.96■■■□□ 2.23
CSPG5-204ENST00000465441 SLC27A3Q5K4L6 730 aa28.95■■■□□ 2.22
CSPG5-204ENST00000465441 CGNL1Q0VF96 1302 aa28.94■■■□□ 2.22
CSPG5-204ENST00000465441 SMG6Q86US8 1419 aaKnown RBP28.94■■■□□ 2.22
CSPG5-204ENST00000465441 FLT4P35916 1363 aa28.94■■■□□ 2.22
CSPG5-204ENST00000465441 TATP17735 454 aaPredicted RBP28.94■■■□□ 2.22
CSPG5-204ENST00000465441 EMILIN1Q9Y6C2 1016 aa28.94■■■□□ 2.22
CSPG5-204ENST00000465441 KIF24Q5T7B8 1368 aa28.93■■■□□ 2.22
CSPG5-204ENST00000465441 KIF20BQ96Q89 1820 aa28.93■■■□□ 2.22
CSPG5-204ENST00000465441 DCAF8L1A6NGE4 600 aa28.93■■■□□ 2.22
CSPG5-204ENST00000465441 AKT1S1Q96B36 256 aa28.93■■■□□ 2.22
CSPG5-204ENST00000465441 SGIP1Q9BQI5 828 aa28.93■■■□□ 2.22
CSPG5-204ENST00000465441 PAPPAQ13219 1627 aa28.92■■■□□ 2.22
CSPG5-204ENST00000465441 KCNQ4P56696 695 aa28.92■■■□□ 2.22
CSPG5-204ENST00000465441 POLR3GLQ9BT43 218 aa28.92■■■□□ 2.22
CSPG5-204ENST00000465441 MYOM1P52179 1685 aa28.91■■■□□ 2.22
CSPG5-204ENST00000465441 NSD2O96028 1365 aa28.9■■■□□ 2.22
CSPG5-204ENST00000465441 SHANK3Q9BYB0 1731 aa28.9■■■□□ 2.22
CSPG5-204ENST00000465441 PPM1GO15355 546 aaPredicted RBP28.89■■■□□ 2.22
CSPG5-204ENST00000465441 SYT17Q9BSW7 474 aa28.87■■■□□ 2.21
CSPG5-204ENST00000465441 FHDC1Q9C0D6 1143 aaPredicted RBP28.87■■■□□ 2.21
CSPG5-204ENST00000465441 YY1P25490 414 aa28.86■■■□□ 2.21
CSPG5-204ENST00000465441 DOT1LQ8TEK3 1739 aa28.86■■■□□ 2.21
CSPG5-204ENST00000465441 EIF4G2P78344 907 aaKnown RBP eCLIP28.85■■■□□ 2.21
CSPG5-204ENST00000465441 HSPA5P11021 654 aaKnown RBP28.84■■■□□ 2.21
CSPG5-204ENST00000465441 ARXQ96QS3 562 aa28.84■■■□□ 2.21
CSPG5-204ENST00000465441 WASHC2AQ641Q2 1341 aa28.84■■■□□ 2.21
CSPG5-204ENST00000465441 SLC16A10Q8TF71 515 aa28.83■■■□□ 2.21
CSPG5-204ENST00000465441 TFCP2L1Q9NZI6 479 aa28.83■■■□□ 2.21
CSPG5-204ENST00000465441 CCNL1Q9UK58 526 aaPredicted RBP28.83■■■□□ 2.21
CSPG5-204ENST00000465441 PCDH11XQ9BZA7 1347 aa28.83■■■□□ 2.21
CSPG5-204ENST00000465441 PCDH11YQ9BZA8 1340 aa28.83■■■□□ 2.21
CSPG5-204ENST00000465441 CYP27B1O15528 508 aa28.82■■■□□ 2.2
CSPG5-204ENST00000465441 CCER1Q8TC90 406 aaPredicted RBP28.82■■■□□ 2.2
CSPG5-204ENST00000465441 POLKQ9UBT6 870 aa28.82■■■□□ 2.2
CSPG5-204ENST00000465441 PNPLA7Q6ZV29 1317 aa28.82■■■□□ 2.2
CSPG5-204ENST00000465441 EYA1Q99502 592 aa28.79■■■□□ 2.2
CSPG5-204ENST00000465441 LY75O60449 1722 aa28.79■■■□□ 2.2
CSPG5-204ENST00000465441 MPRIPQ6WCQ1 1025 aa28.78■■■□□ 2.2
CSPG5-204ENST00000465441 PANK3Q9H999 370 aa28.77■■■□□ 2.2
CSPG5-204ENST00000465441 MAP2P11137 1827 aaKnown RBP28.77■■■□□ 2.2
CSPG5-204ENST00000465441 TNNT2P45379 298 aaPredicted RBP28.76■■■□□ 2.19
CSPG5-204ENST00000465441 SPG7Q9UQ90 795 aa28.74■■■□□ 2.19
CSPG5-204ENST00000465441 NCAPD2Q15021 1401 aa28.74■■■□□ 2.19
CSPG5-204ENST00000465441 NKX1-1Q15270 411 aaPredicted RBP28.73■■■□□ 2.19
CSPG5-204ENST00000465441 QSER1Q2KHR3 1735 aa28.72■■■□□ 2.19
CSPG5-204ENST00000465441 POLD1P28340 1107 aa28.72■■■□□ 2.19
CSPG5-204ENST00000465441 EIF4A2Q14240 407 aaKnown RBP28.71■■■□□ 2.19
CSPG5-204ENST00000465441 COL23A1Q86Y22 540 aaPredicted RBP28.71■■■□□ 2.19
CSPG5-204ENST00000465441 MSH5O43196 834 aa28.7■■■□□ 2.18
CSPG5-204ENST00000465441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.7■■■□□ 2.18
CSPG5-204ENST00000465441 ANKRD26Q9UPS8 1709 aa28.69■■■□□ 2.18
CSPG5-204ENST00000465441 PIGBQ92521 554 aa28.69■■■□□ 2.18
CSPG5-204ENST00000465441 PALLDQ8WX93 1383 aa28.69■■■□□ 2.18
CSPG5-204ENST00000465441 MAP3K5Q99683 1374 aa28.69■■■□□ 2.18
CSPG5-204ENST00000465441 TUBGCP6Q96RT7 1819 aa28.69■■■□□ 2.18
CSPG5-204ENST00000465441 SMARCC1Q92922 1105 aaPredicted RBP28.68■■■□□ 2.18
CSPG5-204ENST00000465441 KLHL34Q8N239 644 aa28.66■■■□□ 2.18
CSPG5-204ENST00000465441 PKD1L3Q7Z443 1732 aa28.66■■■□□ 2.18
CSPG5-204ENST00000465441 HMGB2P26583 209 aaKnown RBP28.65■■■□□ 2.18
CSPG5-204ENST00000465441 IFNL2Q8IZJ0 200 aa28.65■■■□□ 2.18
CSPG5-204ENST00000465441 PHKG2P15735 406 aa28.64■■■□□ 2.18
CSPG5-204ENST00000465441 ITGB4P16144 1822 aa28.63■■■□□ 2.17
CSPG5-204ENST00000465441 COL24A1Q17RW2 1714 aa28.63■■■□□ 2.17
CSPG5-204ENST00000465441 TOGARAM1Q9Y4F4 1720 aa28.63■■■□□ 2.17
CSPG5-204ENST00000465441 MORC1Q86VD1 984 aa28.61■■■□□ 2.17
CSPG5-204ENST00000465441 FLAD1Q8NFF5 587 aa28.6■■■□□ 2.17
CSPG5-204ENST00000465441 TMOD3Q9NYL9 352 aa28.6■■■□□ 2.17
CSPG5-204ENST00000465441 GPR162Q16538 588 aa28.59■■■□□ 2.17
CSPG5-204ENST00000465441 MSL1Q68DK7 614 aa28.59■■■□□ 2.17
CSPG5-204ENST00000465441 IGSF1Q8N6C5 1336 aa28.59■■■□□ 2.17
CSPG5-204ENST00000465441 ASAP1Q9ULH1 1129 aa28.58■■■□□ 2.17
CSPG5-204ENST00000465441 C5P01031 1676 aa28.58■■■□□ 2.16
CSPG5-204ENST00000465441 LOC102724428A0A0B4J2F2 783 aa28.57■■■□□ 2.16
CSPG5-204ENST00000465441 SIK1P57059 783 aa28.57■■■□□ 2.16
CSPG5-204ENST00000465441 NLGN2Q8NFZ4 835 aa28.57■■■□□ 2.16
CSPG5-204ENST00000465441 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
CSPG5-204ENST00000465441 TAF1LQ8IZX4 1826 aa28.56■■■□□ 2.16
CSPG5-204ENST00000465441 AK7Q96M32 723 aa28.56■■■□□ 2.16
CSPG5-204ENST00000465441 SMIM5Q71RC9 77 aa28.55■■■□□ 2.16
CSPG5-204ENST00000465441 AMIGO3Q86WK7 504 aa28.55■■■□□ 2.16
CSPG5-204ENST00000465441 PLEKHO1Q53GL0 409 aaPredicted RBP28.54■■■□□ 2.16
CSPG5-204ENST00000465441 ATG3Q9NT62 314 aa28.54■■■□□ 2.16
CSPG5-204ENST00000465441 LINC00116Q8NCU8 138 aa28.53■■■□□ 2.16
CSPG5-204ENST00000465441 PELP1Q8IZL8 1130 aaKnown RBP28.52■■■□□ 2.16
CSPG5-204ENST00000465441 ZNF784Q8NCA9 323 aaPredicted RBP28.52■■■□□ 2.16
CSPG5-204ENST00000465441 UTRNP46939 3433 aa28.52■■■□□ 2.16
CSPG5-204ENST00000465441 ATP6V1AP38606 617 aa28.51■■■□□ 2.15
CSPG5-204ENST00000465441 ITPK1Q13572 414 aa28.51■■■□□ 2.15
CSPG5-204ENST00000465441 C4BP0C0L5 1744 aa28.51■■■□□ 2.15
CSPG5-204ENST00000465441 PLEKHG2Q9H7P9 1386 aa28.5■■■□□ 2.15
CSPG5-204ENST00000465441 PHF14O94880 888 aa28.5■■■□□ 2.15
CSPG5-204ENST00000465441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.49■■■□□ 2.15
CSPG5-204ENST00000465441 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
CSPG5-204ENST00000465441 HSP90AB1P08238 724 aaKnown RBP28.49■■■□□ 2.15
CSPG5-204ENST00000465441 AMER1Q5JTC6 1135 aaPredicted RBP28.49■■■□□ 2.15
CSPG5-204ENST00000465441 AEBP1Q8IUX7 1158 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms