RNA–Protein interactions for RNA: ENST00000465426.5

PDE6B-205, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-205ENST00000465426 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
PDE6B-205ENST00000465426 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
PDE6B-205ENST00000465426 PANK3Q9H999 370 aa17.23■□□□□ 0.35
PDE6B-205ENST00000465426 INSRP06213 1382 aa17.23■□□□□ 0.35
PDE6B-205ENST00000465426 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
PDE6B-205ENST00000465426 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
PDE6B-205ENST00000465426 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
PDE6B-205ENST00000465426 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
PDE6B-205ENST00000465426 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
PDE6B-205ENST00000465426 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
PDE6B-205ENST00000465426 TATP17735 454 aaPredicted RBP17.18■□□□□ 0.34
PDE6B-205ENST00000465426 PRIM1P49642 420 aaKnown RBP17.18■□□□□ 0.34
PDE6B-205ENST00000465426 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
PDE6B-205ENST00000465426 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
PDE6B-205ENST00000465426 KCNQ4P56696 695 aa17.16■□□□□ 0.34
PDE6B-205ENST00000465426 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
PDE6B-205ENST00000465426 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
PDE6B-205ENST00000465426 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
PDE6B-205ENST00000465426 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 PKD1L3Q7Z443 1732 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 LRRC4BQ9NT99 713 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 ITGB4P16144 1822 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 NSD2O96028 1365 aa17.14■□□□□ 0.33
PDE6B-205ENST00000465426 LY75O60449 1722 aa17.13■□□□□ 0.33
PDE6B-205ENST00000465426 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
PDE6B-205ENST00000465426 EYA1Q99502 592 aa17.13■□□□□ 0.33
PDE6B-205ENST00000465426 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
PDE6B-205ENST00000465426 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
PDE6B-205ENST00000465426 SPON1Q9HCB6 807 aa17.12■□□□□ 0.33
PDE6B-205ENST00000465426 CYP27B1O15528 508 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
PDE6B-205ENST00000465426 ATF5Q9Y2D1 282 aaPredicted RBP17.11■□□□□ 0.33
PDE6B-205ENST00000465426 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
PDE6B-205ENST00000465426 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
PDE6B-205ENST00000465426 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
PDE6B-205ENST00000465426 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
PDE6B-205ENST00000465426 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
PDE6B-205ENST00000465426 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
PDE6B-205ENST00000465426 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
PDE6B-205ENST00000465426 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
PDE6B-205ENST00000465426 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
PDE6B-205ENST00000465426 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
PDE6B-205ENST00000465426 C5P01031 1676 aa17.04■□□□□ 0.32
PDE6B-205ENST00000465426 PTGER2P43116 358 aa17.04■□□□□ 0.32
PDE6B-205ENST00000465426 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
PDE6B-205ENST00000465426 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
PDE6B-205ENST00000465426 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
PDE6B-205ENST00000465426 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
PDE6B-205ENST00000465426 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
PDE6B-205ENST00000465426 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
PDE6B-205ENST00000465426 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
PDE6B-205ENST00000465426 PHKG2P15735 406 aa17.01■□□□□ 0.31
PDE6B-205ENST00000465426 PIGBQ92521 554 aa17.01■□□□□ 0.31
PDE6B-205ENST00000465426 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
PDE6B-205ENST00000465426 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
PDE6B-205ENST00000465426 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
PDE6B-205ENST00000465426 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
PDE6B-205ENST00000465426 MSH5O43196 834 aa16.98■□□□□ 0.31
PDE6B-205ENST00000465426 MTHFSP49914 203 aa16.98■□□□□ 0.31
PDE6B-205ENST00000465426 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
PDE6B-205ENST00000465426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDE6B-205ENST00000465426 IL13P35225 146 aa16.97■□□□□ 0.31
PDE6B-205ENST00000465426 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
PDE6B-205ENST00000465426 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
PDE6B-205ENST00000465426 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
PDE6B-205ENST00000465426 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.31
PDE6B-205ENST00000465426 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
PDE6B-205ENST00000465426 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
PDE6B-205ENST00000465426 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
PDE6B-205ENST00000465426 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
PDE6B-205ENST00000465426 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
PDE6B-205ENST00000465426 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
PDE6B-205ENST00000465426 HMOX1P09601 288 aa16.94■□□□□ 0.3
PDE6B-205ENST00000465426 COL23A1Q86Y22 540 aaPredicted RBP16.94■□□□□ 0.3
PDE6B-205ENST00000465426 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
PDE6B-205ENST00000465426 ARXQ96QS3 562 aa16.94■□□□□ 0.3
PDE6B-205ENST00000465426 UBR3Q6ZT12 1888 aa16.94■□□□□ 0.3
PDE6B-205ENST00000465426 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
PDE6B-205ENST00000465426 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
PDE6B-205ENST00000465426 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
PDE6B-205ENST00000465426 LOC102724428A0A0B4J2F2 783 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 SIK1P57059 783 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
PDE6B-205ENST00000465426 PHF14O94880 888 aa16.91■□□□□ 0.3
PDE6B-205ENST00000465426 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
PDE6B-205ENST00000465426 AK7Q96M32 723 aa16.91■□□□□ 0.3
PDE6B-205ENST00000465426 KDRP35968 1356 aa16.9■□□□□ 0.3
PDE6B-205ENST00000465426 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
PDE6B-205ENST00000465426 ITPK1Q13572 414 aa16.9■□□□□ 0.3
PDE6B-205ENST00000465426 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
PDE6B-205ENST00000465426 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms