RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SGIP1Q9BQI5 828 aa19.88■□□□□ 0.77
ATG4B-214ENST00000465399 SYT17Q9BSW7 474 aa19.88■□□□□ 0.77
ATG4B-214ENST00000465399 RRS1Q15050 365 aaKnown RBP19.86■□□□□ 0.77
ATG4B-214ENST00000465399 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
ATG4B-214ENST00000465399 ARXQ96QS3 562 aa19.86■□□□□ 0.77
ATG4B-214ENST00000465399 GGNBP2Q9H3C7 697 aa19.86■□□□□ 0.77
ATG4B-214ENST00000465399 COL24A1Q17RW2 1714 aa19.85■□□□□ 0.77
ATG4B-214ENST00000465399 FYB1O15117 783 aa19.85■□□□□ 0.77
ATG4B-214ENST00000465399 PRIM1P49642 420 aaKnown RBP19.85■□□□□ 0.77
ATG4B-214ENST00000465399 CDCA8Q53HL2 280 aa19.85■□□□□ 0.77
ATG4B-214ENST00000465399 TRIM26Q12899 539 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-214ENST00000465399 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
ATG4B-214ENST00000465399 CGNL1Q0VF96 1302 aa19.83■□□□□ 0.77
ATG4B-214ENST00000465399 UTRNP46939 3433 aa19.83■□□□□ 0.77
ATG4B-214ENST00000465399 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
ATG4B-214ENST00000465399 NSD2O96028 1365 aa19.83■□□□□ 0.76
ATG4B-214ENST00000465399 MAP3K5Q99683 1374 aa19.83■□□□□ 0.76
ATG4B-214ENST00000465399 NBPF6Q5VWK0 638 aa19.82■□□□□ 0.76
ATG4B-214ENST00000465399 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
ATG4B-214ENST00000465399 NBPF4Q96M43 638 aa19.82■□□□□ 0.76
ATG4B-214ENST00000465399 TFCP2L1Q9NZI6 479 aa19.81■□□□□ 0.76
ATG4B-214ENST00000465399 FLT4P35916 1363 aa19.81■□□□□ 0.76
ATG4B-214ENST00000465399 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 POLD1P28340 1107 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 C5P01031 1676 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 INSRP06213 1382 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 KIF24Q5T7B8 1368 aa19.8■□□□□ 0.76
ATG4B-214ENST00000465399 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-214ENST00000465399 KCNQ4P56696 695 aa19.79■□□□□ 0.76
ATG4B-214ENST00000465399 CCNL1Q9UK58 526 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-214ENST00000465399 ANKRD26Q9UPS8 1709 aa19.78■□□□□ 0.76
ATG4B-214ENST00000465399 ITGB4P16144 1822 aa19.78■□□□□ 0.76
ATG4B-214ENST00000465399 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
ATG4B-214ENST00000465399 PCDH11XQ9BZA7 1347 aa19.77■□□□□ 0.76
ATG4B-214ENST00000465399 PCDH11YQ9BZA8 1340 aa19.77■□□□□ 0.76
ATG4B-214ENST00000465399 PKD1L3Q7Z443 1732 aa19.77■□□□□ 0.76
ATG4B-214ENST00000465399 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
ATG4B-214ENST00000465399 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.76
ATG4B-214ENST00000465399 KLHL34Q8N239 644 aa19.76■□□□□ 0.75
ATG4B-214ENST00000465399 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
ATG4B-214ENST00000465399 TOGARAM1Q9Y4F4 1720 aa19.75■□□□□ 0.75
ATG4B-214ENST00000465399 HMGB2P26583 209 aaKnown RBP19.73■□□□□ 0.75
ATG4B-214ENST00000465399 GPR162Q16538 588 aa19.73■□□□□ 0.75
ATG4B-214ENST00000465399 ZNF784Q8NCA9 323 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-214ENST00000465399 MSH5O43196 834 aa19.72■□□□□ 0.75
ATG4B-214ENST00000465399 CARD14Q9BXL6 1004 aa19.72■□□□□ 0.75
ATG4B-214ENST00000465399 TIMELESSQ9UNS1 1208 aa19.71■□□□□ 0.75
ATG4B-214ENST00000465399 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
ATG4B-214ENST00000465399 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
ATG4B-214ENST00000465399 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-214ENST00000465399 MPRIPQ6WCQ1 1025 aa19.69■□□□□ 0.74
ATG4B-214ENST00000465399 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
ATG4B-214ENST00000465399 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
ATG4B-214ENST00000465399 CYP27B1O15528 508 aa19.68■□□□□ 0.74
ATG4B-214ENST00000465399 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-214ENST00000465399 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
ATG4B-214ENST00000465399 SMARCC1Q92922 1105 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-214ENST00000465399 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
ATG4B-214ENST00000465399 FLAD1Q8NFF5 587 aa19.65■□□□□ 0.74
ATG4B-214ENST00000465399 NLGN2Q8NFZ4 835 aa19.65■□□□□ 0.74
ATG4B-214ENST00000465399 SPG7Q9UQ90 795 aa19.65■□□□□ 0.74
ATG4B-214ENST00000465399 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
ATG4B-214ENST00000465399 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
ATG4B-214ENST00000465399 GOLGB1Q14789 3259 aaKnown RBP19.65■□□□□ 0.74
ATG4B-214ENST00000465399 MSL1Q68DK7 614 aa19.63■□□□□ 0.73
ATG4B-214ENST00000465399 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
ATG4B-214ENST00000465399 AK7Q96M32 723 aa19.62■□□□□ 0.73
ATG4B-214ENST00000465399 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-214ENST00000465399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.61■□□□□ 0.73
ATG4B-214ENST00000465399 PIGBQ92521 554 aa19.6■□□□□ 0.73
ATG4B-214ENST00000465399 EYA1Q99502 592 aa19.6■□□□□ 0.73
ATG4B-214ENST00000465399 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
ATG4B-214ENST00000465399 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
ATG4B-214ENST00000465399 POLKQ9UBT6 870 aa19.59■□□□□ 0.73
ATG4B-214ENST00000465399 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
ATG4B-214ENST00000465399 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-214ENST00000465399 IFNL2Q8IZJ0 200 aa19.57■□□□□ 0.72
ATG4B-214ENST00000465399 CD2APQ9Y5K6 639 aa19.57■□□□□ 0.72
ATG4B-214ENST00000465399 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
ATG4B-214ENST00000465399 PHF14O94880 888 aa19.56■□□□□ 0.72
ATG4B-214ENST00000465399 PHKG2P15735 406 aa19.56■□□□□ 0.72
ATG4B-214ENST00000465399 LOC102724428A0A0B4J2F2 783 aa19.55■□□□□ 0.72
ATG4B-214ENST00000465399 YBX3P16989 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4B-214ENST00000465399 SIK1P57059 783 aa19.55■□□□□ 0.72
ATG4B-214ENST00000465399 C1QTNF8P60827 252 aa19.55■□□□□ 0.72
ATG4B-214ENST00000465399 EIF4A2Q14240 407 aaKnown RBP19.55■□□□□ 0.72
ATG4B-214ENST00000465399 SSFA2P28290 1259 aa19.54■□□□□ 0.72
ATG4B-214ENST00000465399 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
ATG4B-214ENST00000465399 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
ATG4B-214ENST00000465399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.53■□□□□ 0.72
ATG4B-214ENST00000465399 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-214ENST00000465399 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
ATG4B-214ENST00000465399 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
ATG4B-214ENST00000465399 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
ATG4B-214ENST00000465399 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
ATG4B-214ENST00000465399 LINC00116Q8NCU8 138 aa19.52■□□□□ 0.72
ATG4B-214ENST00000465399 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-214ENST00000465399 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
ATG4B-214ENST00000465399 GNPATO15228 680 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms