RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 MCM3P25205 808 aa9.62□□□□□ -0.87
RTL9-201ENST00000465301 FKBP15Q5T1M5 1219 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 KIAA1328Q86T90 577 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
RTL9-201ENST00000465301 NF2P35240 595 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
RTL9-201ENST00000465301 CCDC196A0A1B0GTZ2 297 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 ZPR1O75312 459 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 TMEM266Q2M3C6 531 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 AIDAQ96BJ3 306 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 FERMT2Q96AC1 680 aa9.61□□□□□ -0.87
RTL9-201ENST00000465301 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
RTL9-201ENST00000465301 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 USP5P45974 858 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 SPA17Q15506 151 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 CETN1Q12798 172 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 TTLL12Q14166 644 aaPredicted RBP9.6□□□□□ -0.87
RTL9-201ENST00000465301 STXBP4Q6ZWJ1 553 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 FIBPO43427 364 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 POLR3DP05423 398 aaPredicted RBP9.6□□□□□ -0.87
RTL9-201ENST00000465301 IFIT1P09914 478 aaKnown RBP9.6□□□□□ -0.87
RTL9-201ENST00000465301 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
RTL9-201ENST00000465301 PLEKHH2Q8IVE3 1493 aa9.6□□□□□ -0.87
RTL9-201ENST00000465301 KIF2AO00139 706 aaPredicted RBP9.59□□□□□ -0.87
RTL9-201ENST00000465301 DDX12PQ92771 950 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 CENPHQ9H3R5 247 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 FANCIQ9NVI1 1328 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
RTL9-201ENST00000465301 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 COMMD10Q9Y6G5 202 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 BAG4O95429 457 aaKnown RBP9.59□□□□□ -0.87
RTL9-201ENST00000465301 MAP2K1Q02750 393 aaPredicted RBP9.59□□□□□ -0.87
RTL9-201ENST00000465301 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
RTL9-201ENST00000465301 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 TAOK3Q9H2K8 898 aa9.59□□□□□ -0.87
RTL9-201ENST00000465301 FERP16591 822 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 CEBPZQ03701 1054 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 TSNARE1Q96NA8 513 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 MAP9Q49MG5 647 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 AACSQ86V21 672 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 SPATA32Q96LK8 384 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 LRRFIP2Q9Y608 721 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 ARHGAP5Q13017 1502 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 PDE3AQ14432 1141 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 SMC1AQ14683 1233 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 ZNF428Q96B54 188 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 TRAF1Q13077 416 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 ARHGAP29Q52LW3 1261 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 LARP1Q6PKG0 1096 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 CCDC12Q8WUD4 166 aaPredicted RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 DYDC1Q8WWB3 177 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 PIBF1Q8WXW3 757 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 UPF3BQ9BZI7 483 aaKnown RBP9.58□□□□□ -0.88
RTL9-201ENST00000465301 MKNK2Q9HBH9 465 aa9.58□□□□□ -0.88
RTL9-201ENST00000465301 IBSPP21815 317 aaPredicted RBP9.57□□□□□ -0.88
RTL9-201ENST00000465301 PYM1Q9BRP8 204 aaKnown RBP9.57□□□□□ -0.88
RTL9-201ENST00000465301 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 PANK1Q8TE04 598 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 TCP11L2Q8N4U5 519 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 RNF41Q9H4P4 317 aaPredicted RBP9.57□□□□□ -0.88
RTL9-201ENST00000465301 BTBD11A6QL63 1104 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 TRAK2O60296 914 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 LRRC27Q9C0I9 530 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
RTL9-201ENST00000465301 CTCFLQ8NI51 663 aaPredicted RBP9.57□□□□□ -0.88
RTL9-201ENST00000465301 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 SLC52A1Q9NWF4 448 aa9.57□□□□□ -0.88
RTL9-201ENST00000465301 RPGRIP1LQ68CZ1 1315 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 STK3Q13188 491 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
RTL9-201ENST00000465301 CCDC83Q8IWF9 413 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 SREK1Q8WXA9 508 aaKnown RBP9.56□□□□□ -0.88
RTL9-201ENST00000465301 SIL1Q9H173 461 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 RTEL1-TNFRSF6BF6WH68 1400 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 ZSCAN12O43309 604 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
RTL9-201ENST00000465301 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 CACNA2D4Q7Z3S7 1137 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 ZNF444Q8N0Y2 327 aaPredicted RBP9.56□□□□□ -0.88
RTL9-201ENST00000465301 NUP62CLQ9H1M0 184 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 A0A087WZG4 1122 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 GSTTP1A0A1W2PQM5 241 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 LDHCP07864 332 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 MYL6BP14649 208 aa9.56□□□□□ -0.88
RTL9-201ENST00000465301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.56□□□□□ -0.88
RTL9-201ENST00000465301 SHTN1A0MZ66 631 aa9.55□□□□□ -0.88
RTL9-201ENST00000465301 CTNNA2P26232 953 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms