RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
TRA2B-208ENST00000465245 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
TRA2B-208ENST00000465245 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
TRA2B-208ENST00000465245 IP6K1Q92551 441 aa17.11■□□□□ 0.33
TRA2B-208ENST00000465245 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
TRA2B-208ENST00000465245 NSD2O96028 1365 aa17.11■□□□□ 0.33
TRA2B-208ENST00000465245 C5P01031 1676 aa17.1■□□□□ 0.33
TRA2B-208ENST00000465245 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
TRA2B-208ENST00000465245 MSH5O43196 834 aa17.09■□□□□ 0.33
TRA2B-208ENST00000465245 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
TRA2B-208ENST00000465245 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
TRA2B-208ENST00000465245 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
TRA2B-208ENST00000465245 MEGF6O75095 1541 aa17.08■□□□□ 0.32
TRA2B-208ENST00000465245 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRA2B-208ENST00000465245 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.32
TRA2B-208ENST00000465245 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
TRA2B-208ENST00000465245 USP47Q96K76 1375 aa17.06■□□□□ 0.32
TRA2B-208ENST00000465245 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
TRA2B-208ENST00000465245 ATP10DQ9P241 1426 aa17.05■□□□□ 0.32
TRA2B-208ENST00000465245 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
TRA2B-208ENST00000465245 HOXC9P31274 260 aa17.05■□□□□ 0.32
TRA2B-208ENST00000465245 AMPHP49418 695 aa17.05■□□□□ 0.32
TRA2B-208ENST00000465245 MSL1Q68DK7 614 aa17.05■□□□□ 0.32
TRA2B-208ENST00000465245 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
TRA2B-208ENST00000465245 COG3Q96JB2 828 aa17.04■□□□□ 0.32
TRA2B-208ENST00000465245 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
TRA2B-208ENST00000465245 PUS7Q96PZ0 661 aaKnown RBP17.01■□□□□ 0.31
TRA2B-208ENST00000465245 ITGB4P16144 1822 aa17■□□□□ 0.31
TRA2B-208ENST00000465245 C4BP0C0L5 1744 aa17■□□□□ 0.31
TRA2B-208ENST00000465245 FBLN1P23142 703 aa17■□□□□ 0.31
TRA2B-208ENST00000465245 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
TRA2B-208ENST00000465245 USHBP1Q8N6Y0 703 aa16.99■□□□□ 0.31
TRA2B-208ENST00000465245 GPBP1L1Q9HC44 474 aaPredicted RBP16.99■□□□□ 0.31
TRA2B-208ENST00000465245 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
TRA2B-208ENST00000465245 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
TRA2B-208ENST00000465245 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
TRA2B-208ENST00000465245 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
TRA2B-208ENST00000465245 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
TRA2B-208ENST00000465245 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
TRA2B-208ENST00000465245 ADCY9O60503 1353 aa16.98■□□□□ 0.31
TRA2B-208ENST00000465245 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
TRA2B-208ENST00000465245 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
TRA2B-208ENST00000465245 KIF20BQ96Q89 1820 aa16.97■□□□□ 0.31
TRA2B-208ENST00000465245 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
TRA2B-208ENST00000465245 TATP17735 454 aaPredicted RBP16.96■□□□□ 0.31
TRA2B-208ENST00000465245 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
TRA2B-208ENST00000465245 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
TRA2B-208ENST00000465245 ZNF526Q8TF50 670 aaPredicted RBP16.96■□□□□ 0.31
TRA2B-208ENST00000465245 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.3
TRA2B-208ENST00000465245 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.3
TRA2B-208ENST00000465245 PKD1L3Q7Z443 1732 aa16.94■□□□□ 0.3
TRA2B-208ENST00000465245 HSPA6P17066 643 aa16.94■□□□□ 0.3
TRA2B-208ENST00000465245 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
TRA2B-208ENST00000465245 AK7Q96M32 723 aa16.93■□□□□ 0.3
TRA2B-208ENST00000465245 TESK2Q96S53 571 aa16.93■□□□□ 0.3
TRA2B-208ENST00000465245 IGSF1Q8N6C5 1336 aa16.93■□□□□ 0.3
TRA2B-208ENST00000465245 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
TRA2B-208ENST00000465245 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
TRA2B-208ENST00000465245 NSD3Q9BZ95 1437 aa16.92■□□□□ 0.3
TRA2B-208ENST00000465245 MAP2P11137 1827 aaKnown RBP16.91■□□□□ 0.3
TRA2B-208ENST00000465245 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
TRA2B-208ENST00000465245 PHF14O94880 888 aa16.91■□□□□ 0.3
TRA2B-208ENST00000465245 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
TRA2B-208ENST00000465245 INSRP06213 1382 aa16.9■□□□□ 0.3
TRA2B-208ENST00000465245 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-208ENST00000465245 FLT4P35916 1363 aa16.89■□□□□ 0.3
TRA2B-208ENST00000465245 FYB1O15117 783 aa16.89■□□□□ 0.29
TRA2B-208ENST00000465245 CYP27B1O15528 508 aa16.89■□□□□ 0.29
TRA2B-208ENST00000465245 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
TRA2B-208ENST00000465245 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
TRA2B-208ENST00000465245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
TRA2B-208ENST00000465245 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
TRA2B-208ENST00000465245 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
TRA2B-208ENST00000465245 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
TRA2B-208ENST00000465245 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
TRA2B-208ENST00000465245 SSFA2P28290 1259 aa16.86■□□□□ 0.29
TRA2B-208ENST00000465245 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
TRA2B-208ENST00000465245 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
TRA2B-208ENST00000465245 PIGBQ92521 554 aa16.85■□□□□ 0.29
TRA2B-208ENST00000465245 KIAA1551Q9HCM1 1747 aa16.84■□□□□ 0.29
TRA2B-208ENST00000465245 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
TRA2B-208ENST00000465245 KIF3CO14782 793 aa16.84■□□□□ 0.29
TRA2B-208ENST00000465245 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
TRA2B-208ENST00000465245 SIK1P57059 783 aa16.83■□□□□ 0.28
TRA2B-208ENST00000465245 LINC00116Q8NCU8 138 aa16.83■□□□□ 0.28
TRA2B-208ENST00000465245 NCAPD2Q15021 1401 aa16.82■□□□□ 0.28
TRA2B-208ENST00000465245 GNPATO15228 680 aa16.82■□□□□ 0.28
TRA2B-208ENST00000465245 TMF1P82094 1093 aa16.82■□□□□ 0.28
TRA2B-208ENST00000465245 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
TRA2B-208ENST00000465245 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
TRA2B-208ENST00000465245 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
TRA2B-208ENST00000465245 SPG7Q9UQ90 795 aa16.81■□□□□ 0.28
TRA2B-208ENST00000465245 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
TRA2B-208ENST00000465245 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
TRA2B-208ENST00000465245 MMP10P09238 476 aa16.79■□□□□ 0.28
TRA2B-208ENST00000465245 APLP1P51693 650 aa16.79■□□□□ 0.28
TRA2B-208ENST00000465245 ITPK1Q13572 414 aa16.79■□□□□ 0.28
TRA2B-208ENST00000465245 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
TRA2B-208ENST00000465245 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
TRA2B-208ENST00000465245 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms