RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
EXOSC3-203ENST00000465229 NEFMP07197 916 aa22.32■■□□□ 1.16
EXOSC3-203ENST00000465229 BARGINQ6ZT62 677 aa22.32■■□□□ 1.16
EXOSC3-203ENST00000465229 RGS17Q9UGC6 210 aaPredicted RBP22.32■■□□□ 1.16
EXOSC3-203ENST00000465229 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
EXOSC3-203ENST00000465229 DISP2A7MBM2 1401 aa22.3■■□□□ 1.16
EXOSC3-203ENST00000465229 PLEKHO1Q53GL0 409 aaPredicted RBP22.3■■□□□ 1.16
EXOSC3-203ENST00000465229 FAM98CQ17RN3 349 aaKnown RBP22.29■■□□□ 1.16
EXOSC3-203ENST00000465229 AMOTQ4VCS5 1084 aa22.29■■□□□ 1.16
EXOSC3-203ENST00000465229 CDCA7Q9BWT1 371 aaPredicted RBP22.29■■□□□ 1.16
EXOSC3-203ENST00000465229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.29■■□□□ 1.16
EXOSC3-203ENST00000465229 TMPOP42166 694 aaKnown RBP22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 OVOS2A0A0G2JMS6 1433 aa22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 NFE2L2Q16236 605 aa22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 ZCRB1Q8TBF4 217 aaKnown RBP22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
EXOSC3-203ENST00000465229 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
EXOSC3-203ENST00000465229 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
EXOSC3-203ENST00000465229 ONECUT3O60422 494 aaPredicted RBP22.26■■□□□ 1.15
EXOSC3-203ENST00000465229 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
EXOSC3-203ENST00000465229 GAS2L2Q8NHY3 880 aa22.26■■□□□ 1.15
EXOSC3-203ENST00000465229 GLI3P10071 1580 aa22.25■■□□□ 1.15
EXOSC3-203ENST00000465229 RIPK4P57078 832 aa22.24■■□□□ 1.15
EXOSC3-203ENST00000465229 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
EXOSC3-203ENST00000465229 EXOC5O00471 708 aa22.24■■□□□ 1.15
EXOSC3-203ENST00000465229 RBM6P78332 1123 aaKnown RBP22.24■■□□□ 1.15
EXOSC3-203ENST00000465229 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
EXOSC3-203ENST00000465229 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
EXOSC3-203ENST00000465229 CYP27B1O15528 508 aa22.22■■□□□ 1.15
EXOSC3-203ENST00000465229 DDB1Q16531 1140 aa22.21■■□□□ 1.15
EXOSC3-203ENST00000465229 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
EXOSC3-203ENST00000465229 PARP4Q9UKK3 1724 aaKnown RBP22.21■■□□□ 1.15
EXOSC3-203ENST00000465229 AKAP4Q5JQC9 854 aa22.2■■□□□ 1.15
EXOSC3-203ENST00000465229 DDX54Q8TDD1 881 aaKnown RBP22.2■■□□□ 1.15
EXOSC3-203ENST00000465229 TRIM35Q9UPQ4 493 aa22.2■■□□□ 1.15
EXOSC3-203ENST00000465229 GNAT3A8MTJ3 354 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 NEFLP07196 543 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 PHKG2P15735 406 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 RXRBP28702 533 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 IFNL2Q8IZJ0 200 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
EXOSC3-203ENST00000465229 PCDH11XQ9BZA7 1347 aa22.19■■□□□ 1.14
EXOSC3-203ENST00000465229 PCDH11YQ9BZA8 1340 aa22.19■■□□□ 1.14
EXOSC3-203ENST00000465229 A0A0G2JS52 829 aa22.19■■□□□ 1.14
EXOSC3-203ENST00000465229 MYT1Q01538 1121 aa22.19■■□□□ 1.14
EXOSC3-203ENST00000465229 SEPT12Q8IYM1 358 aa22.19■■□□□ 1.14
EXOSC3-203ENST00000465229 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
EXOSC3-203ENST00000465229 PKD1L3Q7Z443 1732 aa22.18■■□□□ 1.14
EXOSC3-203ENST00000465229 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
EXOSC3-203ENST00000465229 WWC1Q8IX03 1113 aa22.17■■□□□ 1.14
EXOSC3-203ENST00000465229 TNS2Q63HR2 1409 aa22.17■■□□□ 1.14
EXOSC3-203ENST00000465229 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
EXOSC3-203ENST00000465229 WNK3Q9BYP7 1800 aa22.17■■□□□ 1.14
EXOSC3-203ENST00000465229 LMOD3Q0VAK6 560 aa22.16■■□□□ 1.14
EXOSC3-203ENST00000465229 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
EXOSC3-203ENST00000465229 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
EXOSC3-203ENST00000465229 THSD7AQ9UPZ6 1657 aa22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 MCM10Q7L590 875 aa22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 RTF1Q92541 710 aaKnown RBP22.15■■□□□ 1.14
EXOSC3-203ENST00000465229 ZNF521Q96K83 1311 aa22.14■■□□□ 1.14
EXOSC3-203ENST00000465229 LGR6Q9HBX8 967 aa22.14■■□□□ 1.14
EXOSC3-203ENST00000465229 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
EXOSC3-203ENST00000465229 THUMPD2Q9BTF0 503 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-203ENST00000465229 HSP90AB1P08238 724 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-203ENST00000465229 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
EXOSC3-203ENST00000465229 SHANK3Q9BYB0 1731 aa22.12■■□□□ 1.13
EXOSC3-203ENST00000465229 RNMTO43148 476 aaKnown RBP22.12■■□□□ 1.13
EXOSC3-203ENST00000465229 FKBP8Q14318 412 aa22.12■■□□□ 1.13
EXOSC3-203ENST00000465229 DCAF5Q96JK2 942 aa22.12■■□□□ 1.13
EXOSC3-203ENST00000465229 DLG5Q8TDM6 1919 aa22.11■■□□□ 1.13
EXOSC3-203ENST00000465229 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
EXOSC3-203ENST00000465229 WDR63Q8IWG1 891 aa22.09■■□□□ 1.13
EXOSC3-203ENST00000465229 KDM6AO15550 1401 aaPredicted RBP22.09■■□□□ 1.13
EXOSC3-203ENST00000465229 ERICH6BQ5W0A0 696 aa22.07■■□□□ 1.12
EXOSC3-203ENST00000465229 FAM182BQ5T319 152 aa22.06■■□□□ 1.12
EXOSC3-203ENST00000465229 KRT27Q7Z3Y8 459 aa22.06■■□□□ 1.12
EXOSC3-203ENST00000465229 RGS12O14924 1447 aa22.06■■□□□ 1.12
EXOSC3-203ENST00000465229 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
EXOSC3-203ENST00000465229 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
EXOSC3-203ENST00000465229 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
EXOSC3-203ENST00000465229 CALD1Q05682 793 aaKnown RBP22.05■■□□□ 1.12
EXOSC3-203ENST00000465229 CDCA7LQ96GN5 454 aa22.05■■□□□ 1.12
EXOSC3-203ENST00000465229 TEFQ10587 303 aa22.04■■□□□ 1.12
EXOSC3-203ENST00000465229 SLC52A2Q9HAB3 445 aa22.04■■□□□ 1.12
EXOSC3-203ENST00000465229 IL16Q14005 1332 aa22.04■■□□□ 1.12
EXOSC3-203ENST00000465229 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
EXOSC3-203ENST00000465229 NFATC2IPQ8NCF5 419 aa22.03■■□□□ 1.12
EXOSC3-203ENST00000465229 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
EXOSC3-203ENST00000465229 CABP4P57796 275 aa22.02■■□□□ 1.12
EXOSC3-203ENST00000465229 ZNF853P0CG23 659 aa22.02■■□□□ 1.11
EXOSC3-203ENST00000465229 CFAP44Q96MT7 982 aa22.02■■□□□ 1.11
EXOSC3-203ENST00000465229 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
EXOSC3-203ENST00000465229 SLFN5Q08AF3 891 aa22.01■■□□□ 1.11
EXOSC3-203ENST00000465229 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 364.4 ms