RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 ARXQ96QS3 562 aa15.47■□□□□ 0.07
COL11A1-207ENST00000465209 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
COL11A1-207ENST00000465209 ZNF784Q8NCA9 323 aaPredicted RBP15.46■□□□□ 0.07
COL11A1-207ENST00000465209 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
COL11A1-207ENST00000465209 LTV1Q96GA3 475 aaPredicted RBP15.46■□□□□ 0.07
COL11A1-207ENST00000465209 COG3Q96JB2 828 aa15.46■□□□□ 0.07
COL11A1-207ENST00000465209 TAF1LQ8IZX4 1826 aa15.45■□□□□ 0.06
COL11A1-207ENST00000465209 ANKRD26Q9UPS8 1709 aa15.45■□□□□ 0.06
COL11A1-207ENST00000465209 C5P01031 1676 aa15.44■□□□□ 0.06
COL11A1-207ENST00000465209 PKD1L3Q7Z443 1732 aa15.44■□□□□ 0.06
COL11A1-207ENST00000465209 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
COL11A1-207ENST00000465209 KCNQ4P56696 695 aa15.43■□□□□ 0.06
COL11A1-207ENST00000465209 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
COL11A1-207ENST00000465209 FYB1O15117 783 aa15.42■□□□□ 0.06
COL11A1-207ENST00000465209 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
COL11A1-207ENST00000465209 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
COL11A1-207ENST00000465209 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
COL11A1-207ENST00000465209 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
COL11A1-207ENST00000465209 ITGB4P16144 1822 aa15.42■□□□□ 0.06
COL11A1-207ENST00000465209 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
COL11A1-207ENST00000465209 USP47Q96K76 1375 aa15.41■□□□□ 0.06
COL11A1-207ENST00000465209 AMPHP49418 695 aa15.41■□□□□ 0.06
COL11A1-207ENST00000465209 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
COL11A1-207ENST00000465209 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
COL11A1-207ENST00000465209 INSRP06213 1382 aa15.39■□□□□ 0.05
COL11A1-207ENST00000465209 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
COL11A1-207ENST00000465209 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
COL11A1-207ENST00000465209 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
COL11A1-207ENST00000465209 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
COL11A1-207ENST00000465209 FLT4P35916 1363 aa15.38■□□□□ 0.05
COL11A1-207ENST00000465209 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
COL11A1-207ENST00000465209 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
COL11A1-207ENST00000465209 UBR3Q6ZT12 1888 aa15.37■□□□□ 0.05
COL11A1-207ENST00000465209 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
COL11A1-207ENST00000465209 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
COL11A1-207ENST00000465209 CCNL1Q9UK58 526 aaPredicted RBP15.37■□□□□ 0.05
COL11A1-207ENST00000465209 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
COL11A1-207ENST00000465209 TMF1P82094 1093 aa15.36■□□□□ 0.05
COL11A1-207ENST00000465209 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
COL11A1-207ENST00000465209 POLD1P28340 1107 aa15.35■□□□□ 0.05
COL11A1-207ENST00000465209 COL23A1Q86Y22 540 aaPredicted RBP15.35■□□□□ 0.05
COL11A1-207ENST00000465209 CEP350Q5VT06 3117 aa15.35■□□□□ 0.05
COL11A1-207ENST00000465209 CARD14Q9BXL6 1004 aa15.34■□□□□ 0.05
COL11A1-207ENST00000465209 PCDH11XQ9BZA7 1347 aa15.34■□□□□ 0.05
COL11A1-207ENST00000465209 PCDH11YQ9BZA8 1340 aa15.34■□□□□ 0.05
COL11A1-207ENST00000465209 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
COL11A1-207ENST00000465209 CYP27B1O15528 508 aa15.33■□□□□ 0.04
COL11A1-207ENST00000465209 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
COL11A1-207ENST00000465209 PALLDQ8WX93 1383 aa15.33■□□□□ 0.04
COL11A1-207ENST00000465209 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
COL11A1-207ENST00000465209 GPR162Q16538 588 aa15.32■□□□□ 0.04
COL11A1-207ENST00000465209 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
COL11A1-207ENST00000465209 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL11A1-207ENST00000465209 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
COL11A1-207ENST00000465209 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
COL11A1-207ENST00000465209 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
COL11A1-207ENST00000465209 NKX1-1Q15270 411 aaPredicted RBP15.28■□□□□ 0.04
COL11A1-207ENST00000465209 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
COL11A1-207ENST00000465209 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
COL11A1-207ENST00000465209 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
COL11A1-207ENST00000465209 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
COL11A1-207ENST00000465209 MPRIPQ6WCQ1 1025 aa15.26■□□□□ 0.03
COL11A1-207ENST00000465209 PIGBQ92521 554 aa15.26■□□□□ 0.03
COL11A1-207ENST00000465209 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
COL11A1-207ENST00000465209 KIF13BQ9NQT8 1826 aa15.25■□□□□ 0.03
COL11A1-207ENST00000465209 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
COL11A1-207ENST00000465209 ADCY9O60503 1353 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
COL11A1-207ENST00000465209 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 MSH5O43196 834 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 CD2APQ9Y5K6 639 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
COL11A1-207ENST00000465209 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
COL11A1-207ENST00000465209 SMIM5Q71RC9 77 aa15.23■□□□□ 0.03
COL11A1-207ENST00000465209 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-207ENST00000465209 EYA1Q99502 592 aa15.23■□□□□ 0.03
COL11A1-207ENST00000465209 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-207ENST00000465209 KDRP35968 1356 aa15.23■□□□□ 0.03
COL11A1-207ENST00000465209 GIGYF1O75420 1035 aaPredicted RBP15.22■□□□□ 0.03
COL11A1-207ENST00000465209 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
COL11A1-207ENST00000465209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL11A1-207ENST00000465209 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
COL11A1-207ENST00000465209 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
COL11A1-207ENST00000465209 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-207ENST00000465209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.2■□□□□ 0.02
COL11A1-207ENST00000465209 LOC102724428A0A0B4J2F2 783 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 PHKG2P15735 406 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 HMGB2P26583 209 aaKnown RBP15.2■□□□□ 0.02
COL11A1-207ENST00000465209 SSFA2P28290 1259 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 SIK1P57059 783 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 ITPK1Q13572 414 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 AK7Q96M32 723 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
COL11A1-207ENST00000465209 EIF4A2Q14240 407 aaKnown RBP15.19■□□□□ 0.02
COL11A1-207ENST00000465209 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
COL11A1-207ENST00000465209 C4AP0C0L4 1744 aa15.19■□□□□ 0.02
COL11A1-207ENST00000465209 IGSF1Q8N6C5 1336 aa15.18■□□□□ 0.02
COL11A1-207ENST00000465209 BRCA1P38398 1863 aaKnown RBP15.18■□□□□ 0.02
COL11A1-207ENST00000465209 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms