RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 COG3Q96JB2 828 aa20.65■□□□□ 0.9
MCF2L-220ENST00000464800 MEGF6O75095 1541 aa20.64■□□□□ 0.9
MCF2L-220ENST00000464800 TONSLQ96HA7 1378 aa20.64■□□□□ 0.89
MCF2L-220ENST00000464800 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
MCF2L-220ENST00000464800 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
MCF2L-220ENST00000464800 HOXC9P31274 260 aa20.64■□□□□ 0.89
MCF2L-220ENST00000464800 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
MCF2L-220ENST00000464800 C1QTNF8P60827 252 aa20.64■□□□□ 0.89
MCF2L-220ENST00000464800 KCNQ4P56696 695 aa20.63■□□□□ 0.89
MCF2L-220ENST00000464800 RTL1A6NKG5 1358 aa20.62■□□□□ 0.89
MCF2L-220ENST00000464800 AMPHP49418 695 aa20.62■□□□□ 0.89
MCF2L-220ENST00000464800 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
MCF2L-220ENST00000464800 C5P01031 1676 aa20.61■□□□□ 0.89
MCF2L-220ENST00000464800 ZCRB1Q8TBF4 217 aaKnown RBP20.61■□□□□ 0.89
MCF2L-220ENST00000464800 CCNL1Q9UK58 526 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-220ENST00000464800 USP47Q96K76 1375 aa20.59■□□□□ 0.89
MCF2L-220ENST00000464800 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.89
MCF2L-220ENST00000464800 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
MCF2L-220ENST00000464800 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
MCF2L-220ENST00000464800 GIGYF1O75420 1035 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-220ENST00000464800 TESK2Q96S53 571 aa20.57■□□□□ 0.88
MCF2L-220ENST00000464800 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
MCF2L-220ENST00000464800 TAF1LQ8IZX4 1826 aa20.56■□□□□ 0.88
MCF2L-220ENST00000464800 MSH5O43196 834 aa20.56■□□□□ 0.88
MCF2L-220ENST00000464800 FBLN1P23142 703 aa20.56■□□□□ 0.88
MCF2L-220ENST00000464800 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
MCF2L-220ENST00000464800 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
MCF2L-220ENST00000464800 RRS1Q15050 365 aaKnown RBP20.54■□□□□ 0.88
MCF2L-220ENST00000464800 NBPF6Q5VWK0 638 aa20.53■□□□□ 0.88
MCF2L-220ENST00000464800 COL23A1Q86Y22 540 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-220ENST00000464800 USHBP1Q8N6Y0 703 aa20.53■□□□□ 0.88
MCF2L-220ENST00000464800 RAPGEF4Q8WZA2 1011 aa20.53■□□□□ 0.88
MCF2L-220ENST00000464800 NBPF4Q96M43 638 aa20.53■□□□□ 0.88
MCF2L-220ENST00000464800 GRIN3BO60391 1043 aa20.52■□□□□ 0.88
MCF2L-220ENST00000464800 ITGB4P16144 1822 aa20.51■□□□□ 0.87
MCF2L-220ENST00000464800 TOGARAM1Q9Y4F4 1720 aa20.51■□□□□ 0.87
MCF2L-220ENST00000464800 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
MCF2L-220ENST00000464800 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
MCF2L-220ENST00000464800 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
MCF2L-220ENST00000464800 MSL1Q68DK7 614 aa20.5■□□□□ 0.87
MCF2L-220ENST00000464800 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
MCF2L-220ENST00000464800 PKD1L3Q7Z443 1732 aa20.5■□□□□ 0.87
MCF2L-220ENST00000464800 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
MCF2L-220ENST00000464800 TATP17735 454 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-220ENST00000464800 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
MCF2L-220ENST00000464800 C4BP0C0L5 1744 aa20.49■□□□□ 0.87
MCF2L-220ENST00000464800 INSRP06213 1382 aa20.48■□□□□ 0.87
MCF2L-220ENST00000464800 PALLDQ8WX93 1383 aa20.48■□□□□ 0.87
MCF2L-220ENST00000464800 FYB1O15117 783 aa20.48■□□□□ 0.87
MCF2L-220ENST00000464800 FLT4P35916 1363 aa20.47■□□□□ 0.87
MCF2L-220ENST00000464800 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
MCF2L-220ENST00000464800 UBR3Q6ZT12 1888 aa20.46■□□□□ 0.87
MCF2L-220ENST00000464800 TMF1P82094 1093 aa20.46■□□□□ 0.87
MCF2L-220ENST00000464800 FLAD1Q8NFF5 587 aa20.46■□□□□ 0.87
MCF2L-220ENST00000464800 CD2APQ9Y5K6 639 aa20.45■□□□□ 0.86
MCF2L-220ENST00000464800 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
MCF2L-220ENST00000464800 MPRIPQ6WCQ1 1025 aa20.44■□□□□ 0.86
MCF2L-220ENST00000464800 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
MCF2L-220ENST00000464800 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
MCF2L-220ENST00000464800 AK7Q96M32 723 aa20.42■□□□□ 0.86
MCF2L-220ENST00000464800 NSD3Q9BZ95 1437 aa20.42■□□□□ 0.86
MCF2L-220ENST00000464800 CYP27B1O15528 508 aa20.41■□□□□ 0.86
MCF2L-220ENST00000464800 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-220ENST00000464800 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
MCF2L-220ENST00000464800 NCAPD2Q15021 1401 aa20.39■□□□□ 0.85
MCF2L-220ENST00000464800 CDCA8Q53HL2 280 aa20.38■□□□□ 0.85
MCF2L-220ENST00000464800 ADCY9O60503 1353 aa20.37■□□□□ 0.85
MCF2L-220ENST00000464800 PHF14O94880 888 aa20.37■□□□□ 0.85
MCF2L-220ENST00000464800 GPBP1L1Q9HC44 474 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-220ENST00000464800 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
MCF2L-220ENST00000464800 EMILIN1Q9Y6C2 1016 aa20.36■□□□□ 0.85
MCF2L-220ENST00000464800 IGSF1Q8N6C5 1336 aa20.35■□□□□ 0.85
MCF2L-220ENST00000464800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
MCF2L-220ENST00000464800 PIGBQ92521 554 aa20.35■□□□□ 0.85
MCF2L-220ENST00000464800 SPG7Q9UQ90 795 aa20.35■□□□□ 0.85
MCF2L-220ENST00000464800 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
MCF2L-220ENST00000464800 SSFA2P28290 1259 aa20.33■□□□□ 0.85
MCF2L-220ENST00000464800 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
MCF2L-220ENST00000464800 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
MCF2L-220ENST00000464800 SIK1P57059 783 aa20.32■□□□□ 0.84
MCF2L-220ENST00000464800 LINC00116Q8NCU8 138 aa20.32■□□□□ 0.84
MCF2L-220ENST00000464800 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
MCF2L-220ENST00000464800 ZNF526Q8TF50 670 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-220ENST00000464800 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
MCF2L-220ENST00000464800 TMOD3Q9NYL9 352 aa20.31■□□□□ 0.84
MCF2L-220ENST00000464800 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-220ENST00000464800 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
MCF2L-220ENST00000464800 WWC3Q9ULE0 1092 aa20.3■□□□□ 0.84
MCF2L-220ENST00000464800 CEP350Q5VT06 3117 aa20.29■□□□□ 0.84
MCF2L-220ENST00000464800 GNPATO15228 680 aa20.29■□□□□ 0.84
MCF2L-220ENST00000464800 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
MCF2L-220ENST00000464800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.842e-13■■□□□ 11.4
MCF2L-220ENST00000464800 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
MCF2L-220ENST00000464800 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.84
MCF2L-220ENST00000464800 ZNF831Q5JPB2 1677 aa20.27■□□□□ 0.84
MCF2L-220ENST00000464800 HSPA6P17066 643 aa20.27■□□□□ 0.84
MCF2L-220ENST00000464800 EYA1Q99502 592 aa20.27■□□□□ 0.84
MCF2L-220ENST00000464800 ASAP1Q9ULH1 1129 aa20.27■□□□□ 0.84
MCF2L-220ENST00000464800 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-220ENST00000464800 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms