RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
RPP40-203ENST00000464646 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
RPP40-203ENST00000464646 HSP90AB2PQ58FF8 381 aa19.12■□□□□ 0.65
RPP40-203ENST00000464646 CARD14Q9BXL6 1004 aa19.1■□□□□ 0.65
RPP40-203ENST00000464646 EMILIN1Q9Y6C2 1016 aa19.1■□□□□ 0.65
RPP40-203ENST00000464646 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
RPP40-203ENST00000464646 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
RPP40-203ENST00000464646 KCNQ4P56696 695 aa19.09■□□□□ 0.65
RPP40-203ENST00000464646 MEGF6O75095 1541 aa19.09■□□□□ 0.65
RPP40-203ENST00000464646 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.65
RPP40-203ENST00000464646 FLT4P35916 1363 aa19.08■□□□□ 0.65
RPP40-203ENST00000464646 CGNL1Q0VF96 1302 aa19.08■□□□□ 0.65
RPP40-203ENST00000464646 EIF4G2P78344 907 aaKnown RBP eCLIP19.08■□□□□ 0.64
RPP40-203ENST00000464646 KLHL34Q8N239 644 aa19.08■□□□□ 0.64
RPP40-203ENST00000464646 MYOM1P52179 1685 aa19.08■□□□□ 0.64
RPP40-203ENST00000464646 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
RPP40-203ENST00000464646 LRRC4BQ9NT99 713 aa19.07■□□□□ 0.64
RPP40-203ENST00000464646 INSRP06213 1382 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 MSH5O43196 834 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 YY1P25490 414 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 SLC27A3Q5K4L6 730 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 TFCP2L1Q9NZI6 479 aa19.06■□□□□ 0.64
RPP40-203ENST00000464646 HSPA5P11021 654 aaKnown RBP19.05■□□□□ 0.64
RPP40-203ENST00000464646 CCNL1Q9UK58 526 aaPredicted RBP19.04■□□□□ 0.64
RPP40-203ENST00000464646 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
RPP40-203ENST00000464646 PCDH11XQ9BZA7 1347 aa19.03■□□□□ 0.64
RPP40-203ENST00000464646 PCDH11YQ9BZA8 1340 aa19.03■□□□□ 0.64
RPP40-203ENST00000464646 PTGER2P43116 358 aa19.03■□□□□ 0.64
RPP40-203ENST00000464646 SHANK3Q9BYB0 1731 aa19.03■□□□□ 0.64
RPP40-203ENST00000464646 MPRIPQ6WCQ1 1025 aa19.02■□□□□ 0.64
RPP40-203ENST00000464646 FHDC1Q9C0D6 1143 aaPredicted RBP19.02■□□□□ 0.64
RPP40-203ENST00000464646 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
RPP40-203ENST00000464646 POLD1P28340 1107 aa19■□□□□ 0.63
RPP40-203ENST00000464646 ARXQ96QS3 562 aa19■□□□□ 0.63
RPP40-203ENST00000464646 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
RPP40-203ENST00000464646 PANK3Q9H999 370 aa18.99■□□□□ 0.63
RPP40-203ENST00000464646 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
RPP40-203ENST00000464646 SYT17Q9BSW7 474 aa18.98■□□□□ 0.63
RPP40-203ENST00000464646 PAPPAQ13219 1627 aa18.98■□□□□ 0.63
RPP40-203ENST00000464646 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
RPP40-203ENST00000464646 NSD2O96028 1365 aa18.96■□□□□ 0.63
RPP40-203ENST00000464646 EYA1Q99502 592 aa18.96■□□□□ 0.63
RPP40-203ENST00000464646 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
RPP40-203ENST00000464646 WASHC2AQ641Q2 1341 aa18.96■□□□□ 0.63
RPP40-203ENST00000464646 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
RPP40-203ENST00000464646 LY75O60449 1722 aa18.95■□□□□ 0.62
RPP40-203ENST00000464646 CYP27B1O15528 508 aa18.95■□□□□ 0.62
RPP40-203ENST00000464646 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
RPP40-203ENST00000464646 MORC1Q86VD1 984 aa18.94■□□□□ 0.62
RPP40-203ENST00000464646 PALLDQ8WX93 1383 aa18.93■□□□□ 0.62
RPP40-203ENST00000464646 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
RPP40-203ENST00000464646 GPR162Q16538 588 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 SMARCC1Q92922 1105 aaPredicted RBP18.92■□□□□ 0.62
RPP40-203ENST00000464646 SGIP1Q9BQI5 828 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 TUBGCP6Q96RT7 1819 aa18.92■□□□□ 0.62
RPP40-203ENST00000464646 ITGB4P16144 1822 aa18.91■□□□□ 0.62
RPP40-203ENST00000464646 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
RPP40-203ENST00000464646 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
RPP40-203ENST00000464646 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
RPP40-203ENST00000464646 IFNL2Q8IZJ0 200 aa18.9■□□□□ 0.62
RPP40-203ENST00000464646 AK7Q96M32 723 aa18.9■□□□□ 0.62
RPP40-203ENST00000464646 QSER1Q2KHR3 1735 aa18.89■□□□□ 0.61
RPP40-203ENST00000464646 PHF14O94880 888 aa18.89■□□□□ 0.61
RPP40-203ENST00000464646 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
RPP40-203ENST00000464646 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
RPP40-203ENST00000464646 PIGBQ92521 554 aa18.89■□□□□ 0.61
RPP40-203ENST00000464646 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
RPP40-203ENST00000464646 C5P01031 1676 aa18.88■□□□□ 0.61
RPP40-203ENST00000464646 TOGARAM1Q9Y4F4 1720 aa18.86■□□□□ 0.61
RPP40-203ENST00000464646 PHKG2P15735 406 aa18.86■□□□□ 0.61
RPP40-203ENST00000464646 PLEKHO1Q53GL0 409 aaPredicted RBP18.85■□□□□ 0.61
RPP40-203ENST00000464646 FLAD1Q8NFF5 587 aa18.85■□□□□ 0.61
RPP40-203ENST00000464646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
RPP40-203ENST00000464646 ATP6V1AP38606 617 aa18.84■□□□□ 0.61
RPP40-203ENST00000464646 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
RPP40-203ENST00000464646 TAF1LQ8IZX4 1826 aa18.84■□□□□ 0.61
RPP40-203ENST00000464646 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.6
RPP40-203ENST00000464646 SIK1P57059 783 aa18.83■□□□□ 0.6
RPP40-203ENST00000464646 ZNF530Q6P9A1 599 aaPredicted RBP18.83■□□□□ 0.6
RPP40-203ENST00000464646 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
RPP40-203ENST00000464646 ASAP1Q9ULH1 1129 aa18.83■□□□□ 0.6
RPP40-203ENST00000464646 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
RPP40-203ENST00000464646 SMIM5Q71RC9 77 aa18.82■□□□□ 0.6
RPP40-203ENST00000464646 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
RPP40-203ENST00000464646 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
RPP40-203ENST00000464646 CHD4Q14839 1912 aa18.81■□□□□ 0.6
RPP40-203ENST00000464646 HSP90AB1P08238 724 aaKnown RBP18.81■□□□□ 0.6
RPP40-203ENST00000464646 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
RPP40-203ENST00000464646 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
RPP40-203ENST00000464646 CABP4P57796 275 aa18.8■□□□□ 0.6
RPP40-203ENST00000464646 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
RPP40-203ENST00000464646 MAP3K5Q99683 1374 aa18.8■□□□□ 0.6
RPP40-203ENST00000464646 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
RPP40-203ENST00000464646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.79■□□□□ 0.6
RPP40-203ENST00000464646 GNPATO15228 680 aa18.79■□□□□ 0.6
RPP40-203ENST00000464646 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms