RNA–Protein interactions for RNA: ENST00000464612.5

SNHG12-204, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-204ENST00000464612 SOCS7O14512 581 aa12.09□□□□□ -0.47
SNHG12-204ENST00000464612 RAPGEF4Q8WZA2 1011 aa12.09□□□□□ -0.47
SNHG12-204ENST00000464612 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
SNHG12-204ENST00000464612 HMOX1P09601 288 aa12.08□□□□□ -0.48
SNHG12-204ENST00000464612 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
SNHG12-204ENST00000464612 KCNA4P22459 653 aa12.08□□□□□ -0.48
SNHG12-204ENST00000464612 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
SNHG12-204ENST00000464612 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
SNHG12-204ENST00000464612 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
SNHG12-204ENST00000464612 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNHG12-204ENST00000464612 KDRP35968 1356 aa12.06□□□□□ -0.48
SNHG12-204ENST00000464612 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
SNHG12-204ENST00000464612 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
SNHG12-204ENST00000464612 DDX54Q8TDD1 881 aaKnown RBP12.06□□□□□ -0.48
SNHG12-204ENST00000464612 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
SNHG12-204ENST00000464612 CYP27B1O15528 508 aa12.04□□□□□ -0.48
SNHG12-204ENST00000464612 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
SNHG12-204ENST00000464612 TRIM37O94972 964 aa12.03□□□□□ -0.48
SNHG12-204ENST00000464612 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
SNHG12-204ENST00000464612 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
SNHG12-204ENST00000464612 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
SNHG12-204ENST00000464612 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
SNHG12-204ENST00000464612 ANP32CO43423 234 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
SNHG12-204ENST00000464612 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
SNHG12-204ENST00000464612 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SNHG12-204ENST00000464612 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 NUDCQ9Y266 331 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 SBF2Q86WG5 1849 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 BCL9O00512 1426 aa12.02□□□□□ -0.49
SNHG12-204ENST00000464612 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
SNHG12-204ENST00000464612 KCNQ2O43526 872 aa12.01□□□□□ -0.49
SNHG12-204ENST00000464612 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
SNHG12-204ENST00000464612 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
SNHG12-204ENST00000464612 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
SNHG12-204ENST00000464612 PHKG2P15735 406 aa12□□□□□ -0.49
SNHG12-204ENST00000464612 PRKAR2BP31323 418 aa12□□□□□ -0.49
SNHG12-204ENST00000464612 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
SNHG12-204ENST00000464612 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
SNHG12-204ENST00000464612 DEFB132Q7Z7B7 95 aa12□□□□□ -0.49
SNHG12-204ENST00000464612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
SNHG12-204ENST00000464612 NHSQ6T4R5 1651 aa12□□□□□ -0.49
SNHG12-204ENST00000464612 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
SNHG12-204ENST00000464612 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
SNHG12-204ENST00000464612 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
SNHG12-204ENST00000464612 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
SNHG12-204ENST00000464612 SF3B2Q13435 895 aaKnown RBP11.98□□□□□ -0.49
SNHG12-204ENST00000464612 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
SNHG12-204ENST00000464612 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
SNHG12-204ENST00000464612 KDM6AO15550 1401 aaPredicted RBP11.97□□□□□ -0.49
SNHG12-204ENST00000464612 APBA3O96018 575 aa11.97□□□□□ -0.49
SNHG12-204ENST00000464612 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
SNHG12-204ENST00000464612 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
SNHG12-204ENST00000464612 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
SNHG12-204ENST00000464612 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
SNHG12-204ENST00000464612 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
SNHG12-204ENST00000464612 FCHSD2O94868 740 aa11.96□□□□□ -0.49
SNHG12-204ENST00000464612 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
SNHG12-204ENST00000464612 BTAF1O14981 1849 aa11.95□□□□□ -0.5
SNHG12-204ENST00000464612 BAG6P46379 1132 aa11.95□□□□□ -0.5
SNHG12-204ENST00000464612 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNHG12-204ENST00000464612 MPRIPQ6WCQ1 1025 aa11.95□□□□□ -0.5
SNHG12-204ENST00000464612 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
SNHG12-204ENST00000464612 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
SNHG12-204ENST00000464612 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
SNHG12-204ENST00000464612 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
SNHG12-204ENST00000464612 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
SNHG12-204ENST00000464612 ADAMTS8Q9UP79 889 aa11.94□□□□□ -0.5
SNHG12-204ENST00000464612 ITGB4P16144 1822 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
SNHG12-204ENST00000464612 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 DCAF5Q96JK2 942 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
SNHG12-204ENST00000464612 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
SNHG12-204ENST00000464612 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
SNHG12-204ENST00000464612 PIGBQ92521 554 aa11.92□□□□□ -0.5
SNHG12-204ENST00000464612 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
SNHG12-204ENST00000464612 MAPK8IP3Q9UPT6 1336 aa11.91□□□□□ -0.5
SNHG12-204ENST00000464612 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
SNHG12-204ENST00000464612 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
SNHG12-204ENST00000464612 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
SNHG12-204ENST00000464612 RREB1Q92766 1687 aa11.91□□□□□ -0.5
SNHG12-204ENST00000464612 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
SNHG12-204ENST00000464612 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.5
SNHG12-204ENST00000464612 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 PLSCR1O15162 318 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 CABP4P57796 275 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 PROM2Q8N271 834 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
SNHG12-204ENST00000464612 PNISRQ8TF01 805 aaKnown RBP11.9□□□□□ -0.5
SNHG12-204ENST00000464612 MRC1P22897 1456 aa11.89□□□□□ -0.51
SNHG12-204ENST00000464612 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
SNHG12-204ENST00000464612 NEFMP07197 916 aa11.89□□□□□ -0.51
SNHG12-204ENST00000464612 KCNQ4P56696 695 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms