RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
ATF3-207ENST00000464547 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
ATF3-207ENST00000464547 LTN1O94822 1766 aa12.53□□□□□ -0.4
ATF3-207ENST00000464547 RGS3P49796 1198 aa12.53□□□□□ -0.4
ATF3-207ENST00000464547 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
ATF3-207ENST00000464547 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
ATF3-207ENST00000464547 MST1RQ04912 1400 aa12.53□□□□□ -0.4
ATF3-207ENST00000464547 ATF3P18847 181 aa12.52□□□□□ -0.41
ATF3-207ENST00000464547 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.41
ATF3-207ENST00000464547 USP19O94966 1318 aa12.52□□□□□ -0.41
ATF3-207ENST00000464547 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
ATF3-207ENST00000464547 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 GCP02774 474 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 ARHGEF25Q86VW2 580 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 MSH6P52701 1360 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 DCCP43146 1447 aa12.51□□□□□ -0.41
ATF3-207ENST00000464547 GNAT3A8MTJ3 354 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
ATF3-207ENST00000464547 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
ATF3-207ENST00000464547 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 ABCC4O15439 1325 aa12.5□□□□□ -0.41
ATF3-207ENST00000464547 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
ATF3-207ENST00000464547 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
ATF3-207ENST00000464547 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 LMOD2Q6P5Q4 547 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
ATF3-207ENST00000464547 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
ATF3-207ENST00000464547 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
ATF3-207ENST00000464547 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
ATF3-207ENST00000464547 IL17REQ8NFR9 667 aa12.48□□□□□ -0.41
ATF3-207ENST00000464547 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
ATF3-207ENST00000464547 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
ATF3-207ENST00000464547 ALS2Q96Q42 1657 aa12.47□□□□□ -0.41
ATF3-207ENST00000464547 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.41
ATF3-207ENST00000464547 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
ATF3-207ENST00000464547 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.42
ATF3-207ENST00000464547 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
ATF3-207ENST00000464547 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
ATF3-207ENST00000464547 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
ATF3-207ENST00000464547 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
ATF3-207ENST00000464547 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 RGS12O14924 1447 aa12.45□□□□□ -0.42
ATF3-207ENST00000464547 PLEKHO1Q53GL0 409 aaPredicted RBP12.44□□□□□ -0.42
ATF3-207ENST00000464547 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
ATF3-207ENST00000464547 STRCQ7RTU9 1775 aa12.43□□□□□ -0.42
ATF3-207ENST00000464547 PTPRCP08575 1304 aa12.43□□□□□ -0.42
ATF3-207ENST00000464547 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
ATF3-207ENST00000464547 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
ATF3-207ENST00000464547 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
ATF3-207ENST00000464547 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
ATF3-207ENST00000464547 XIRP1Q702N8 1843 aaKnown RBP12.42□□□□□ -0.42
ATF3-207ENST00000464547 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
ATF3-207ENST00000464547 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
ATF3-207ENST00000464547 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
ATF3-207ENST00000464547 PXDNQ92626 1479 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
ATF3-207ENST00000464547 AMOTQ4VCS5 1084 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 TNS3Q68CZ2 1445 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
ATF3-207ENST00000464547 G2E3Q7L622 706 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 NOP58Q9Y2X3 529 aaKnown RBP12.41□□□□□ -0.42
ATF3-207ENST00000464547 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
ATF3-207ENST00000464547 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
ATF3-207ENST00000464547 NUCB1Q02818 461 aa12.4□□□□□ -0.42
ATF3-207ENST00000464547 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
ATF3-207ENST00000464547 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
ATF3-207ENST00000464547 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
ATF3-207ENST00000464547 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
ATF3-207ENST00000464547 ERBB3P21860 1342 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 COL18A1P39060 1754 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
ATF3-207ENST00000464547 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 CABLES1Q8TDN4 633 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
ATF3-207ENST00000464547 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
ATF3-207ENST00000464547 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
ATF3-207ENST00000464547 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
ATF3-207ENST00000464547 C1orf141Q5JVX7 400 aa12.37□□□□□ -0.43
ATF3-207ENST00000464547 GCC1Q96CN9 775 aa12.37□□□□□ -0.43
ATF3-207ENST00000464547 FAM208AQ9UK61 1670 aaKnown RBP12.37□□□□□ -0.43
ATF3-207ENST00000464547 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
ATF3-207ENST00000464547 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
ATF3-207ENST00000464547 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
ATF3-207ENST00000464547 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms