RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 TESK2Q96S53 571 aa9.23□□□□□ -0.93
RPGR-204ENST00000464437 TRPC5Q9UL62 973 aaPredicted RBP9.23□□□□□ -0.93
RPGR-204ENST00000464437 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
RPGR-204ENST00000464437 PLCH1Q4KWH8 1693 aa9.23□□□□□ -0.93
RPGR-204ENST00000464437 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
RPGR-204ENST00000464437 SLIT2O94813 1529 aa9.22□□□□□ -0.93
RPGR-204ENST00000464437 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 KTN1Q86UP2 1357 aaKnown RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
RPGR-204ENST00000464437 ATRNO75882 1429 aa9.22□□□□□ -0.93
RPGR-204ENST00000464437 CPSF1Q10570 1443 aaKnown RBP9.22□□□□□ -0.93
RPGR-204ENST00000464437 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.93
RPGR-204ENST00000464437 NRKQ7Z2Y5 1582 aa9.21□□□□□ -0.93
RPGR-204ENST00000464437 TMF1P82094 1093 aa9.21□□□□□ -0.94
RPGR-204ENST00000464437 NLRP13Q86W25 1043 aa9.21□□□□□ -0.94
RPGR-204ENST00000464437 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.94
RPGR-204ENST00000464437 PRDM11Q9NQV5 511 aa9.21□□□□□ -0.94
RPGR-204ENST00000464437 COL14A1Q05707 1796 aaKnown RBP9.21□□□□□ -0.94
RPGR-204ENST00000464437 SSH2Q76I76 1423 aa9.21□□□□□ -0.94
RPGR-204ENST00000464437 PIK3C2AO00443 1686 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 MON2Q7Z3U7 1717 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 NWD2Q9ULI1 1742 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 NLRP6P59044 892 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
RPGR-204ENST00000464437 PUS7Q96PZ0 661 aaKnown RBP9.2□□□□□ -0.94
RPGR-204ENST00000464437 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 USP19O94966 1318 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 TTC21AQ8NDW8 1320 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 KIAA0232Q92628 1395 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 NINLQ9Y2I6 1382 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 RGS12O14924 1447 aa9.2□□□□□ -0.94
RPGR-204ENST00000464437 ZC3H6P61129 1189 aaKnown RBP9.19□□□□□ -0.94
RPGR-204ENST00000464437 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
RPGR-204ENST00000464437 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
RPGR-204ENST00000464437 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
RPGR-204ENST00000464437 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
RPGR-204ENST00000464437 CD163L1Q9NR16 1453 aa9.19□□□□□ -0.94
RPGR-204ENST00000464437 SLIT3O75094 1523 aa9.18□□□□□ -0.94
RPGR-204ENST00000464437 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
RPGR-204ENST00000464437 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
RPGR-204ENST00000464437 CHRNA2Q15822 529 aa9.18□□□□□ -0.94
RPGR-204ENST00000464437 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
RPGR-204ENST00000464437 NRAPQ86VF7 1730 aa9.18□□□□□ -0.94
RPGR-204ENST00000464437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
RPGR-204ENST00000464437 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
RPGR-204ENST00000464437 GLI3P10071 1580 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 CPDO75976 1380 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 ZBTB7CA1YPR0 619 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 C2orf72A6NCS6 295 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 GCP02774 474 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 VPS72Q15906 364 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 ADGRD1Q6QNK2 874 aa9.17□□□□□ -0.94
RPGR-204ENST00000464437 KIF3CO14782 793 aa9.16□□□□□ -0.94
RPGR-204ENST00000464437 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
RPGR-204ENST00000464437 PCDHGA4Q9Y5G9 962 aa9.16□□□□□ -0.94
RPGR-204ENST00000464437 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 A0A0G2JS52 829 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 HSPA5P11021 654 aaKnown RBP9.15□□□□□ -0.94
RPGR-204ENST00000464437 MYT1Q01538 1121 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 NME9Q86XW9 330 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 KCNH5Q8NCM2 988 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 POLR3GLQ9BT43 218 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
RPGR-204ENST00000464437 MYOM1P52179 1685 aa9.14□□□□□ -0.95
RPGR-204ENST00000464437 LMO7Q8WWI1 1683 aa9.14□□□□□ -0.95
RPGR-204ENST00000464437 EVA1CP58658 441 aa9.14□□□□□ -0.95
RPGR-204ENST00000464437 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
RPGR-204ENST00000464437 CAMTA1Q9Y6Y1 1673 aa9.13□□□□□ -0.95
RPGR-204ENST00000464437 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
RPGR-204ENST00000464437 NFAT5O94916 1531 aa9.13□□□□□ -0.95
RPGR-204ENST00000464437 COL5A2P05997 1499 aaPredicted RBP9.13□□□□□ -0.95
RPGR-204ENST00000464437 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 SPATA31A5Q5VU36 1347 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 SPATA31A7Q8IWB4 1347 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 ARHGAP33O14559 1287 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
RPGR-204ENST00000464437 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 USP35Q9P2H5 1018 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 OVOS2A0A0J9YW53 1432 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 OVOS2Q6IE36 1432 aa9.12□□□□□ -0.95
RPGR-204ENST00000464437 SPATA31A1Q5TZJ5 1347 aa9.11□□□□□ -0.95
RPGR-204ENST00000464437 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
RPGR-204ENST00000464437 ARHGEF25Q86VW2 580 aa9.11□□□□□ -0.95
RPGR-204ENST00000464437 COG3Q96JB2 828 aa9.11□□□□□ -0.95
RPGR-204ENST00000464437 UPF1Q92900 1129 aaKnown RBP eCLIP9.1□□□□□ -0.95
RPGR-204ENST00000464437 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
RPGR-204ENST00000464437 BCL11BQ9C0K0 894 aaPredicted RBP9.1□□□□□ -0.95
RPGR-204ENST00000464437 CRB1P82279 1406 aa9.1□□□□□ -0.95
RPGR-204ENST00000464437 NSD3Q9BZ95 1437 aa9.1□□□□□ -0.95
RPGR-204ENST00000464437 ABCC6O95255 1503 aa9.1□□□□□ -0.95
RPGR-204ENST00000464437 LTN1O94822 1766 aa9.09□□□□□ -0.95
RPGR-204ENST00000464437 COL18A1P39060 1754 aa9.09□□□□□ -0.95
RPGR-204ENST00000464437 ONECUT3O60422 494 aaPredicted RBP9.09□□□□□ -0.95
RPGR-204ENST00000464437 SLC34A2O95436 690 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms