RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 RWDD1Q9H446 243 aaPredicted RBP9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 DISP3Q9P2K9 1392 aa9.11□□□□□ -0.95
CLSTN1-204ENST00000464286 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
CLSTN1-204ENST00000464286 WDR7Q9Y4E6 1490 aa9.1□□□□□ -0.95
CLSTN1-204ENST00000464286 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
CLSTN1-204ENST00000464286 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
CLSTN1-204ENST00000464286 PLB1Q6P1J6 1458 aa9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 SPHKAPQ2M3C7 1700 aa9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 CT47B1P0C2W7 299 aaPredicted RBP9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 CLCN1P35523 988 aa9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 SKOR2Q2VWA4 1001 aaPredicted RBP9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 CHMP5Q9NZZ3 219 aa9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 MADDQ8WXG6 1647 aa9.09□□□□□ -0.95
CLSTN1-204ENST00000464286 SLC10A3P09131 477 aa9.08□□□□□ -0.96
CLSTN1-204ENST00000464286 COPS2P61201 443 aa9.08□□□□□ -0.96
CLSTN1-204ENST00000464286 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
CLSTN1-204ENST00000464286 CEP152O94986 1710 aa9.08□□□□□ -0.96
CLSTN1-204ENST00000464286 SAMD9LQ8IVG5 1584 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 SHROOM2Q13796 1616 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 TPM2P07951 284 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 C20orf194Q5TEA3 1177 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 ANP32BQ92688 251 aaKnown RBP9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 ATP10BO94823 1461 aa9.07□□□□□ -0.96
CLSTN1-204ENST00000464286 CDC42BPBQ9Y5S2 1711 aa9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 CHMP7Q8WUX9 453 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 TRIM44Q96DX7 344 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 GBP4Q96PP9 640 aa9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 CHMP4BQ9H444 224 aaKnown RBP9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 POLR3AO14802 1390 aaPredicted RBP9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
CLSTN1-204ENST00000464286 TRPM2O94759 1503 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 KANK1Q14678 1352 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 FSD2A1L4K1 749 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 MCM4P33991 863 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 PPP1R18Q6NYC8 613 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 WDR63Q8IWG1 891 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 HSCBQ8IWL3 235 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 NAP1L5Q96NT1 182 aaPredicted RBP9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 MYH16Q9H6N6 1097 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 ANTXR1Q9H6X2 564 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
CLSTN1-204ENST00000464286 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 ACTN4O43707 911 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 HSP90AA2PQ14568 343 aaPredicted RBP9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 NBPF1Q3BBV0 1214 aa9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 CFAP53Q96M91 514 aa9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 ARHGAP5Q13017 1502 aa9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 KIF16BQ96L93 1317 aa9.04□□□□□ -0.96
CLSTN1-204ENST00000464286 ADGRL1O94910 1474 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 GOLGA6L22H0YM25 854 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 ZPR1O75312 459 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 CFHP08603 1231 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 RGL3Q3MIN7 710 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 KMT5BQ4FZB7 885 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 MAP7D2Q96T17 732 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 POGKQ9P215 609 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 MYOM1P52179 1685 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 USP19O94966 1318 aa9.03□□□□□ -0.96
CLSTN1-204ENST00000464286 SBNO2Q9Y2G9 1366 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 SYCP2Q9BX26 1530 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 TRAK2O60296 914 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 TERF1P54274 439 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 IRX2Q9BZI1 471 aaPredicted RBP9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 REREQ9P2R6 1566 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 LMTK3Q96Q04 1460 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 NLRP1Q9C000 1473 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 USP32Q8NFA0 1604 aa9.02□□□□□ -0.97
CLSTN1-204ENST00000464286 APAF1O14727 1248 aa9.01□□□□□ -0.97
CLSTN1-204ENST00000464286 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
CLSTN1-204ENST00000464286 RUNDC1Q96C34 613 aa9.01□□□□□ -0.97
CLSTN1-204ENST00000464286 SLKQ9H2G2 1235 aaPredicted RBP9.01□□□□□ -0.97
CLSTN1-204ENST00000464286 MYOM2P54296 1465 aa9.01□□□□□ -0.97
CLSTN1-204ENST00000464286 TET3O43151 1660 aa9□□□□□ -0.97
CLSTN1-204ENST00000464286 XRCC6P12956 609 aaKnown RBP eCLIP9□□□□□ -0.97
CLSTN1-204ENST00000464286 MTERF4Q7Z6M4 381 aaKnown RBP9□□□□□ -0.97
CLSTN1-204ENST00000464286 SNX21Q969T3 373 aa9□□□□□ -0.97
CLSTN1-204ENST00000464286 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
CLSTN1-204ENST00000464286 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
CLSTN1-204ENST00000464286 MYO3AQ8NEV4 1616 aa9□□□□□ -0.97
CLSTN1-204ENST00000464286 NSD2O96028 1365 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 RTEL1-TNFRSF6BF6WH68 1400 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 TULP1O00294 542 aaPredicted RBP8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 SOCS7O14512 581 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 IGHDP01880 384 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 CCDC173Q0VFZ6 552 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 PKNOX2Q96KN3 472 aa8.99□□□□□ -0.97
CLSTN1-204ENST00000464286 GRPEL1Q9HAV7 217 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms