RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
LMNB1-204ENST00000463908 OVOS2A0A0G2JMS6 1433 aa25.45■■□□□ 1.66
LMNB1-204ENST00000463908 HMOX1P09601 288 aa25.43■■□□□ 1.66
LMNB1-204ENST00000463908 KDRP35968 1356 aa25.43■■□□□ 1.66
LMNB1-204ENST00000463908 U2SURPO15042 1029 aaKnown RBP25.42■■□□□ 1.66
LMNB1-204ENST00000463908 TNS2Q63HR2 1409 aa25.42■■□□□ 1.66
LMNB1-204ENST00000463908 DDX54Q8TDD1 881 aaKnown RBP25.41■■□□□ 1.66
LMNB1-204ENST00000463908 ANP32CO43423 234 aa25.4■■□□□ 1.66
LMNB1-204ENST00000463908 FAM196AQ6ZSG2 479 aa25.4■■□□□ 1.66
LMNB1-204ENST00000463908 NUDCQ9Y266 331 aa25.39■■□□□ 1.66
LMNB1-204ENST00000463908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.65
LMNB1-204ENST00000463908 CYP27B1O15528 508 aa25.36■■□□□ 1.65
LMNB1-204ENST00000463908 CCDC184Q52MB2 194 aa25.36■■□□□ 1.65
LMNB1-204ENST00000463908 U2AF1L5P0DN76 240 aaPredicted RBP25.35■■□□□ 1.65
LMNB1-204ENST00000463908 U2AF1Q01081 240 aaKnown RBP eCLIP25.35■■□□□ 1.65
LMNB1-204ENST00000463908 SPG7Q9UQ90 795 aa25.35■■□□□ 1.65
LMNB1-204ENST00000463908 BCL9O00512 1426 aa25.33■■□□□ 1.65
LMNB1-204ENST00000463908 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
LMNB1-204ENST00000463908 SHANK3Q9BYB0 1731 aa25.33■■□□□ 1.65
LMNB1-204ENST00000463908 RSPH6AQ9H0K4 717 aa25.33■■□□□ 1.65
LMNB1-204ENST00000463908 PLEKHG2Q9H7P9 1386 aa25.32■■□□□ 1.64
LMNB1-204ENST00000463908 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
LMNB1-204ENST00000463908 FCHSD2O94868 740 aa25.31■■□□□ 1.64
LMNB1-204ENST00000463908 TRIM37O94972 964 aa25.31■■□□□ 1.64
LMNB1-204ENST00000463908 PTF1AQ7RTS3 328 aa25.31■■□□□ 1.64
LMNB1-204ENST00000463908 PCDH11XQ9BZA7 1347 aa25.31■■□□□ 1.64
LMNB1-204ENST00000463908 PCDH11YQ9BZA8 1340 aa25.31■■□□□ 1.64
LMNB1-204ENST00000463908 PKD1L3Q7Z443 1732 aa25.3■■□□□ 1.64
LMNB1-204ENST00000463908 CCDC125Q86Z20 511 aa25.3■■□□□ 1.64
LMNB1-204ENST00000463908 PHACTR3Q96KR7 559 aa25.3■■□□□ 1.64
LMNB1-204ENST00000463908 PHKG2P15735 406 aa25.29■■□□□ 1.64
LMNB1-204ENST00000463908 PRKAR2BP31323 418 aa25.29■■□□□ 1.64
LMNB1-204ENST00000463908 NKX1-1Q15270 411 aaPredicted RBP25.29■■□□□ 1.64
LMNB1-204ENST00000463908 KCNQ2O43526 872 aa25.28■■□□□ 1.64
LMNB1-204ENST00000463908 MTHFSDQ2M296 383 aaKnown RBP25.28■■□□□ 1.64
LMNB1-204ENST00000463908 IFNL2Q8IZJ0 200 aa25.28■■□□□ 1.64
LMNB1-204ENST00000463908 ACSBG1Q96GR2 724 aa25.28■■□□□ 1.64
LMNB1-204ENST00000463908 ZNF530Q6P9A1 599 aaPredicted RBP25.26■■□□□ 1.63
LMNB1-204ENST00000463908 PLEKHF1Q96S99 279 aa25.25■■□□□ 1.63
LMNB1-204ENST00000463908 DIEXFQ68CQ4 756 aaKnown RBP25.24■■□□□ 1.63
LMNB1-204ENST00000463908 BCL11BQ9C0K0 894 aaPredicted RBP25.24■■□□□ 1.63
LMNB1-204ENST00000463908 PRIM1P49642 420 aaKnown RBP25.23■■□□□ 1.63
LMNB1-204ENST00000463908 ADAMTS8Q9UP79 889 aa25.23■■□□□ 1.63
LMNB1-204ENST00000463908 LRP5O75197 1615 aa25.23■■□□□ 1.63
LMNB1-204ENST00000463908 SBF2Q86WG5 1849 aa25.21■■□□□ 1.63
LMNB1-204ENST00000463908 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
LMNB1-204ENST00000463908 DEFB132Q7Z7B7 95 aa25.2■■□□□ 1.62
LMNB1-204ENST00000463908 APBA3O96018 575 aa25.19■■□□□ 1.62
LMNB1-204ENST00000463908 C1orf141Q5JVX7 400 aa25.19■■□□□ 1.62
LMNB1-204ENST00000463908 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
LMNB1-204ENST00000463908 PNISRQ8TF01 805 aaKnown RBP25.19■■□□□ 1.62
LMNB1-204ENST00000463908 MRS2Q9HD23 443 aa25.19■■□□□ 1.62
LMNB1-204ENST00000463908 SF3B2Q13435 895 aaKnown RBP25.18■■□□□ 1.62
LMNB1-204ENST00000463908 WDR43Q15061 677 aaKnown RBP eCLIP25.18■■□□□ 1.626e-11■■■□□ 18.3
LMNB1-204ENST00000463908 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
LMNB1-204ENST00000463908 HSP90AB1P08238 724 aaKnown RBP25.17■■□□□ 1.62
LMNB1-204ENST00000463908 GAS2L2Q8NHY3 880 aa25.17■■□□□ 1.62
LMNB1-204ENST00000463908 SYTL4Q96C24 671 aaPredicted RBP25.17■■□□□ 1.62
LMNB1-204ENST00000463908 LGR6Q9HBX8 967 aa25.17■■□□□ 1.62
LMNB1-204ENST00000463908 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
LMNB1-204ENST00000463908 KDM6AO15550 1401 aaPredicted RBP25.15■■□□□ 1.62
LMNB1-204ENST00000463908 EN1Q05925 392 aaPredicted RBP25.15■■□□□ 1.62
LMNB1-204ENST00000463908 TNS1Q9HBL0 1735 aaKnown RBP25.15■■□□□ 1.62
LMNB1-204ENST00000463908 NHSQ6T4R5 1651 aa25.14■■□□□ 1.62
LMNB1-204ENST00000463908 CCDC146Q8IYE0 955 aa25.14■■□□□ 1.62
LMNB1-204ENST00000463908 CAMKK2Q96RR4 588 aa25.14■■□□□ 1.62
LMNB1-204ENST00000463908 TOGARAM1Q9Y4F4 1720 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 ERVV-2B6SEH9 535 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 PLSCR1O15162 318 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 BAG6P46379 1132 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 IL17REQ8NFR9 667 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 PIGBQ92521 554 aa25.13■■□□□ 1.61
LMNB1-204ENST00000463908 DOT1LQ8TEK3 1739 aa25.12■■□□□ 1.61
LMNB1-204ENST00000463908 GNAT3A8MTJ3 354 aa25.12■■□□□ 1.61
LMNB1-204ENST00000463908 RNMTO43148 476 aaKnown RBP25.12■■□□□ 1.61
LMNB1-204ENST00000463908 EZH2Q15910 746 aaKnown RBP25.11■■□□□ 1.61
LMNB1-204ENST00000463908 MIER1Q8N108 512 aa25.11■■□□□ 1.61
LMNB1-204ENST00000463908 PROM2Q8N271 834 aa25.1■■□□□ 1.61
LMNB1-204ENST00000463908 RUNDC1Q96C34 613 aa25.1■■□□□ 1.61
LMNB1-204ENST00000463908 MAP3K5Q99683 1374 aa25.09■■□□□ 1.61
LMNB1-204ENST00000463908 NEFMP07197 916 aa25.09■■□□□ 1.61
LMNB1-204ENST00000463908 NFE2L2Q16236 605 aa25.09■■□□□ 1.61
LMNB1-204ENST00000463908 CABP4P57796 275 aa25.08■■□□□ 1.61
LMNB1-204ENST00000463908 NFATC2IPQ8NCF5 419 aa25.08■■□□□ 1.61
LMNB1-204ENST00000463908 TMOD3Q9NYL9 352 aa25.08■■□□□ 1.61
LMNB1-204ENST00000463908 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
LMNB1-204ENST00000463908 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.6
LMNB1-204ENST00000463908 BTAF1O14981 1849 aa25.06■■□□□ 1.6
LMNB1-204ENST00000463908 ITGB4P16144 1822 aa25.05■■□□□ 1.6
LMNB1-204ENST00000463908 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
LMNB1-204ENST00000463908 HTATSF1O43719 755 aaKnown RBP25.05■■□□□ 1.6
LMNB1-204ENST00000463908 TMPOP42166 694 aaKnown RBP25.05■■□□□ 1.6
LMNB1-204ENST00000463908 DCTN1Q14203 1278 aa25.05■■□□□ 1.6
LMNB1-204ENST00000463908 SLC52A2Q9HAB3 445 aa25.05■■□□□ 1.6
LMNB1-204ENST00000463908 ADAMTS7Q9UKP4 1686 aa25.04■■□□□ 1.6
LMNB1-204ENST00000463908 MCM10Q7L590 875 aa25.04■■□□□ 1.6
LMNB1-204ENST00000463908 ATG3Q9NT62 314 aa25.04■■□□□ 1.6
LMNB1-204ENST00000463908 ASAP1Q9ULH1 1129 aa25.04■■□□□ 1.6
LMNB1-204ENST00000463908 SCN11AQ9UI33 1791 aa25.03■■□□□ 1.6
LMNB1-204ENST00000463908 RIPK4P57078 832 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms