RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PAPPAQ13219 1627 aa28.41■■■□□ 2.14
PDLIM4-205ENST00000463615 SLC15A2Q16348 729 aa28.41■■■□□ 2.14
PDLIM4-205ENST00000463615 STK32BQ9NY57 414 aa28.41■■■□□ 2.14
PDLIM4-205ENST00000463615 EMILIN1Q9Y6C2 1016 aa28.41■■■□□ 2.14
PDLIM4-205ENST00000463615 NCAPD2Q15021 1401 aa28.41■■■□□ 2.14
PDLIM4-205ENST00000463615 RAPGEF4Q8WZA2 1011 aa28.39■■■□□ 2.14
PDLIM4-205ENST00000463615 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.13
PDLIM4-205ENST00000463615 USHBP1Q8N6Y0 703 aa28.37■■■□□ 2.13
PDLIM4-205ENST00000463615 KAT6BQ8WYB5 2073 aa28.36■■■□□ 2.13
PDLIM4-205ENST00000463615 TATP17735 454 aaPredicted RBP28.36■■■□□ 2.13
PDLIM4-205ENST00000463615 NSD2O96028 1365 aa28.36■■■□□ 2.13
PDLIM4-205ENST00000463615 PRIM1P49642 420 aaKnown RBP28.35■■■□□ 2.13
PDLIM4-205ENST00000463615 SLC27A3Q5K4L6 730 aa28.35■■■□□ 2.13
PDLIM4-205ENST00000463615 POLKQ9UBT6 870 aa28.35■■■□□ 2.13
PDLIM4-205ENST00000463615 DOT1LQ8TEK3 1739 aa28.35■■■□□ 2.13
PDLIM4-205ENST00000463615 PDGFDQ9GZP0 370 aaPredicted RBP28.34■■■□□ 2.13
PDLIM4-205ENST00000463615 LRRC4BQ9NT99 713 aa28.34■■■□□ 2.13
PDLIM4-205ENST00000463615 POLR3GLQ9BT43 218 aa28.33■■■□□ 2.13
PDLIM4-205ENST00000463615 MAP2P11137 1827 aaKnown RBP28.33■■■□□ 2.13
PDLIM4-205ENST00000463615 PANK3Q9H999 370 aa28.32■■■□□ 2.12
PDLIM4-205ENST00000463615 PCDH11XQ9BZA7 1347 aa28.32■■■□□ 2.12
PDLIM4-205ENST00000463615 PCDH11YQ9BZA8 1340 aa28.32■■■□□ 2.12
PDLIM4-205ENST00000463615 LY75O60449 1722 aa28.29■■■□□ 2.12
PDLIM4-205ENST00000463615 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
PDLIM4-205ENST00000463615 PTGER2P43116 358 aa28.28■■■□□ 2.12
PDLIM4-205ENST00000463615 AKT1S1Q96B36 256 aa28.28■■■□□ 2.12
PDLIM4-205ENST00000463615 SYTL4Q96C24 671 aaPredicted RBP28.28■■■□□ 2.12
PDLIM4-205ENST00000463615 PLEKHG2Q9H7P9 1386 aa28.27■■■□□ 2.12
PDLIM4-205ENST00000463615 PPM1GO15355 546 aaPredicted RBP28.27■■■□□ 2.12
PDLIM4-205ENST00000463615 MTFR1LQ9H019 292 aa28.27■■■□□ 2.12
PDLIM4-205ENST00000463615 PPP1R1BQ9UD71 204 aaPredicted RBP28.27■■■□□ 2.12
PDLIM4-205ENST00000463615 CYP27B1O15528 508 aa28.26■■■□□ 2.11
PDLIM4-205ENST00000463615 ZBTB7AO95365 584 aa28.26■■■□□ 2.11
PDLIM4-205ENST00000463615 ZNF827Q17R98 1081 aa28.26■■■□□ 2.11
PDLIM4-205ENST00000463615 EYA1Q99502 592 aa28.26■■■□□ 2.11
PDLIM4-205ENST00000463615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.25■■■□□ 2.11
PDLIM4-205ENST00000463615 QSER1Q2KHR3 1735 aa28.24■■■□□ 2.11
PDLIM4-205ENST00000463615 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
PDLIM4-205ENST00000463615 NKX1-1Q15270 411 aaPredicted RBP28.23■■■□□ 2.11
PDLIM4-205ENST00000463615 EIF4A2Q14240 407 aaKnown RBP28.21■■■□□ 2.11
PDLIM4-205ENST00000463615 SPG7Q9UQ90 795 aa28.2■■■□□ 2.1
PDLIM4-205ENST00000463615 ATF5Q9Y2D1 282 aaPredicted RBP28.2■■■□□ 2.1
PDLIM4-205ENST00000463615 SLC16A10Q8TF71 515 aa28.19■■■□□ 2.1
PDLIM4-205ENST00000463615 TNNT2P45379 298 aaPredicted RBP28.18■■■□□ 2.1
PDLIM4-205ENST00000463615 HMGB2P26583 209 aaKnown RBP28.17■■■□□ 2.1
PDLIM4-205ENST00000463615 CCNL1Q9UK58 526 aaPredicted RBP28.17■■■□□ 2.1
PDLIM4-205ENST00000463615 TOGARAM1Q9Y4F4 1720 aa28.17■■■□□ 2.1
PDLIM4-205ENST00000463615 KIF7Q2M1P5 1343 aa28.17■■■□□ 2.1
PDLIM4-205ENST00000463615 IGSF1Q8N6C5 1336 aa28.17■■■□□ 2.1
PDLIM4-205ENST00000463615 KNSTRNQ9Y448 316 aa28.16■■■□□ 2.1
PDLIM4-205ENST00000463615 PNPLA7Q6ZV29 1317 aa28.15■■■□□ 2.1
PDLIM4-205ENST00000463615 MORC1Q86VD1 984 aa28.14■■■□□ 2.1
PDLIM4-205ENST00000463615 COL24A1Q17RW2 1714 aa28.14■■■□□ 2.1
PDLIM4-205ENST00000463615 KCNQ4P56696 695 aa28.13■■■□□ 2.09
PDLIM4-205ENST00000463615 AMER1Q5JTC6 1135 aaPredicted RBP28.13■■■□□ 2.09
PDLIM4-205ENST00000463615 TFCP2L1Q9NZI6 479 aa28.12■■■□□ 2.09
PDLIM4-205ENST00000463615 ITGB4P16144 1822 aa28.12■■■□□ 2.09
PDLIM4-205ENST00000463615 PALLDQ8WX93 1383 aa28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 MAP3K5Q99683 1374 aa28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 TUBGCP6Q96RT7 1819 aa28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 MPRIPQ6WCQ1 1025 aa28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 IFNL2Q8IZJ0 200 aa28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 SMARCC1Q92922 1105 aaPredicted RBP28.11■■■□□ 2.09
PDLIM4-205ENST00000463615 PHKG2P15735 406 aa28.1■■■□□ 2.09
PDLIM4-205ENST00000463615 PIGBQ92521 554 aa28.09■■■□□ 2.09
PDLIM4-205ENST00000463615 ARXQ96QS3 562 aa28.08■■■□□ 2.09
PDLIM4-205ENST00000463615 SYT17Q9BSW7 474 aa28.08■■■□□ 2.09
PDLIM4-205ENST00000463615 C5P01031 1676 aa28.07■■■□□ 2.08
PDLIM4-205ENST00000463615 PER1O15534 1290 aaPredicted RBP28.07■■■□□ 2.08
PDLIM4-205ENST00000463615 FHDC1Q9C0D6 1143 aaPredicted RBP28.07■■■□□ 2.08
PDLIM4-205ENST00000463615 DCAF8L1A6NGE4 600 aa28.06■■■□□ 2.08
PDLIM4-205ENST00000463615 TAF1LQ8IZX4 1826 aa28.04■■■□□ 2.08
PDLIM4-205ENST00000463615 KDRP35968 1356 aa28.03■■■□□ 2.08
PDLIM4-205ENST00000463615 AMOTQ4VCS5 1084 aa28.02■■■□□ 2.08
PDLIM4-205ENST00000463615 TMOD3Q9NYL9 352 aa28.02■■■□□ 2.08
PDLIM4-205ENST00000463615 IL13P35225 146 aa28.01■■■□□ 2.07
PDLIM4-205ENST00000463615 PLEKHO1Q53GL0 409 aaPredicted RBP28.01■■■□□ 2.07
PDLIM4-205ENST00000463615 COL23A1Q86Y22 540 aaPredicted RBP28.01■■■□□ 2.07
PDLIM4-205ENST00000463615 FLAD1Q8NFF5 587 aa28.01■■■□□ 2.07
PDLIM4-205ENST00000463615 NPC1L1Q9UHC9 1359 aa28■■■□□ 2.07
PDLIM4-205ENST00000463615 HSP90AB1P08238 724 aaKnown RBP28■■■□□ 2.07
PDLIM4-205ENST00000463615 POLD1P28340 1107 aa28■■■□□ 2.07
PDLIM4-205ENST00000463615 ERVV-2B6SEH9 535 aa27.99■■■□□ 2.07
PDLIM4-205ENST00000463615 DCAF5Q96JK2 942 aa27.98■■■□□ 2.07
PDLIM4-205ENST00000463615 C4BP0C0L5 1744 aa27.98■■■□□ 2.07
PDLIM4-205ENST00000463615 LOC102724428A0A0B4J2F2 783 aa27.97■■■□□ 2.07
PDLIM4-205ENST00000463615 SIK1P57059 783 aa27.97■■■□□ 2.07
PDLIM4-205ENST00000463615 AEBP1Q8IUX7 1158 aa27.96■■■□□ 2.07
PDLIM4-205ENST00000463615 ASAP1Q9ULH1 1129 aa27.95■■■□□ 2.06
PDLIM4-205ENST00000463615 ATG3Q9NT62 314 aa27.94■■■□□ 2.06
PDLIM4-205ENST00000463615 KDM6AO15550 1401 aaPredicted RBP27.93■■■□□ 2.06
PDLIM4-205ENST00000463615 MTHFSP49914 203 aa27.93■■■□□ 2.06
PDLIM4-205ENST00000463615 SULT6B1Q6IMI4 303 aa27.93■■■□□ 2.06
PDLIM4-205ENST00000463615 ZNF530Q6P9A1 599 aaPredicted RBP27.93■■■□□ 2.06
PDLIM4-205ENST00000463615 ZNF831Q5JPB2 1677 aa27.92■■■□□ 2.06
PDLIM4-205ENST00000463615 YY1P25490 414 aa27.92■■■□□ 2.06
PDLIM4-205ENST00000463615 UBR3Q6ZT12 1888 aa27.91■■■□□ 2.06
PDLIM4-205ENST00000463615 AK7Q96M32 723 aa27.91■■■□□ 2.06
PDLIM4-205ENST00000463615 LINC00116Q8NCU8 138 aa27.9■■■□□ 2.06
PDLIM4-205ENST00000463615 MSH5O43196 834 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms