RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
GPATCH4-204ENST00000463513 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
GPATCH4-204ENST00000463513 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-204ENST00000463513 IL13P35225 146 aa13.44□□□□□ -0.26
GPATCH4-204ENST00000463513 SF3B2Q13435 895 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-204ENST00000463513 FAM196AQ6ZSG2 479 aa13.44□□□□□ -0.26
GPATCH4-204ENST00000463513 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-204ENST00000463513 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
GPATCH4-204ENST00000463513 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
GPATCH4-204ENST00000463513 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
GPATCH4-204ENST00000463513 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
GPATCH4-204ENST00000463513 NHSQ6T4R5 1651 aa13.43□□□□□ -0.26
GPATCH4-204ENST00000463513 ANP32CO43423 234 aa13.42□□□□□ -0.26
GPATCH4-204ENST00000463513 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
GPATCH4-204ENST00000463513 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
GPATCH4-204ENST00000463513 VIRMAQ69YN4 1812 aaKnown RBP13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 HMOX1P09601 288 aa13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 KDRP35968 1356 aa13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
GPATCH4-204ENST00000463513 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
GPATCH4-204ENST00000463513 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
GPATCH4-204ENST00000463513 UPF1Q92900 1129 aaKnown RBP eCLIP13.4□□□□□ -0.26
GPATCH4-204ENST00000463513 BTAF1O14981 1849 aa13.39□□□□□ -0.27
GPATCH4-204ENST00000463513 TRIM37O94972 964 aa13.39□□□□□ -0.27
GPATCH4-204ENST00000463513 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
GPATCH4-204ENST00000463513 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
GPATCH4-204ENST00000463513 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
GPATCH4-204ENST00000463513 ITGB4P16144 1822 aa13.38□□□□□ -0.27
GPATCH4-204ENST00000463513 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
GPATCH4-204ENST00000463513 BCL9O00512 1426 aa13.38□□□□□ -0.27
GPATCH4-204ENST00000463513 NEFMP07197 916 aa13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
GPATCH4-204ENST00000463513 BAG6P46379 1132 aa13.36□□□□□ -0.27
GPATCH4-204ENST00000463513 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
GPATCH4-204ENST00000463513 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
GPATCH4-204ENST00000463513 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
GPATCH4-204ENST00000463513 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
GPATCH4-204ENST00000463513 CYP27B1O15528 508 aa13.34□□□□□ -0.27
GPATCH4-204ENST00000463513 APBA3O96018 575 aa13.34□□□□□ -0.27
GPATCH4-204ENST00000463513 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
GPATCH4-204ENST00000463513 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
GPATCH4-204ENST00000463513 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
GPATCH4-204ENST00000463513 PHKG2P15735 406 aa13.33□□□□□ -0.28
GPATCH4-204ENST00000463513 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
GPATCH4-204ENST00000463513 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
GPATCH4-204ENST00000463513 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.28
GPATCH4-204ENST00000463513 RREB1Q92766 1687 aa13.32□□□□□ -0.28
GPATCH4-204ENST00000463513 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
GPATCH4-204ENST00000463513 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
GPATCH4-204ENST00000463513 FCHSD2O94868 740 aa13.31□□□□□ -0.28
GPATCH4-204ENST00000463513 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
GPATCH4-204ENST00000463513 DEFB132Q7Z7B7 95 aa13.31□□□□□ -0.28
GPATCH4-204ENST00000463513 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
GPATCH4-204ENST00000463513 KCNQ2O43526 872 aa13.3□□□□□ -0.28
GPATCH4-204ENST00000463513 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
GPATCH4-204ENST00000463513 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
GPATCH4-204ENST00000463513 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
GPATCH4-204ENST00000463513 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
GPATCH4-204ENST00000463513 LY75O60449 1722 aa13.28□□□□□ -0.28
GPATCH4-204ENST00000463513 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
GPATCH4-204ENST00000463513 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
GPATCH4-204ENST00000463513 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
GPATCH4-204ENST00000463513 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
GPATCH4-204ENST00000463513 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
GPATCH4-204ENST00000463513 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
GPATCH4-204ENST00000463513 MRC1P22897 1456 aa13.26□□□□□ -0.29
GPATCH4-204ENST00000463513 CABP4P57796 275 aa13.26□□□□□ -0.29
GPATCH4-204ENST00000463513 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
GPATCH4-204ENST00000463513 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
GPATCH4-204ENST00000463513 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
GPATCH4-204ENST00000463513 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
GPATCH4-204ENST00000463513 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
GPATCH4-204ENST00000463513 C5P01031 1676 aa13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 PLSCR1O15162 318 aa13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 TEFQ10587 303 aa13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
GPATCH4-204ENST00000463513 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 PIGBQ92521 554 aa13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 CAMKK2Q96RR4 588 aa13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 ADAMTS8Q9UP79 889 aa13.23□□□□□ -0.29
GPATCH4-204ENST00000463513 TXNRD1Q16881 649 aa13.22□□□□□ -0.29
GPATCH4-204ENST00000463513 CCDC184Q52MB2 194 aa13.22□□□□□ -0.29
GPATCH4-204ENST00000463513 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
GPATCH4-204ENST00000463513 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms