RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 NBPF6Q5VWK0 638 aa30.64■■■□□ 2.5
PDLIM7-206ENST00000463411 ZCRB1Q8TBF4 217 aaKnown RBP30.64■■■□□ 2.5
PDLIM7-206ENST00000463411 NBPF4Q96M43 638 aa30.64■■■□□ 2.5
PDLIM7-206ENST00000463411 HSP90AB2PQ58FF8 381 aa30.63■■■□□ 2.49
PDLIM7-206ENST00000463411 RAPGEF4Q8WZA2 1011 aa30.63■■■□□ 2.49
PDLIM7-206ENST00000463411 USHBP1Q8N6Y0 703 aa30.61■■■□□ 2.49
PDLIM7-206ENST00000463411 PPP1R1BQ9UD71 204 aaPredicted RBP30.61■■■□□ 2.49
PDLIM7-206ENST00000463411 EMILIN1Q9Y6C2 1016 aa30.6■■■□□ 2.49
PDLIM7-206ENST00000463411 MAP2P11137 1827 aaKnown RBP30.59■■■□□ 2.49
PDLIM7-206ENST00000463411 PAPPAQ13219 1627 aa30.58■■■□□ 2.49
PDLIM7-206ENST00000463411 TATP17735 454 aaPredicted RBP30.58■■■□□ 2.49
PDLIM7-206ENST00000463411 SLC15A2Q16348 729 aa30.58■■■□□ 2.49
PDLIM7-206ENST00000463411 SYTL4Q96C24 671 aaPredicted RBP30.58■■■□□ 2.49
PDLIM7-206ENST00000463411 PPM1GO15355 546 aaPredicted RBP30.57■■■□□ 2.48
PDLIM7-206ENST00000463411 PRIM1P49642 420 aaKnown RBP30.53■■■□□ 2.48
PDLIM7-206ENST00000463411 PCDH11XQ9BZA7 1347 aa30.52■■■□□ 2.48
PDLIM7-206ENST00000463411 PCDH11YQ9BZA8 1340 aa30.52■■■□□ 2.48
PDLIM7-206ENST00000463411 SLC27A3Q5K4L6 730 aa30.51■■■□□ 2.47
PDLIM7-206ENST00000463411 WASHC2AQ641Q2 1341 aa30.5■■■□□ 2.47
PDLIM7-206ENST00000463411 LY75O60449 1722 aa30.5■■■□□ 2.47
PDLIM7-206ENST00000463411 PKD1L3Q7Z443 1732 aa30.5■■■□□ 2.47
PDLIM7-206ENST00000463411 ZBTB7AO95365 584 aa30.49■■■□□ 2.47
PDLIM7-206ENST00000463411 PDGFDQ9GZP0 370 aaPredicted RBP30.49■■■□□ 2.47
PDLIM7-206ENST00000463411 PANK3Q9H999 370 aa30.48■■■□□ 2.47
PDLIM7-206ENST00000463411 NSD2O96028 1365 aa30.48■■■□□ 2.47
PDLIM7-206ENST00000463411 NCAPD2Q15021 1401 aa30.47■■■□□ 2.47
PDLIM7-206ENST00000463411 LRRC4BQ9NT99 713 aa30.46■■■□□ 2.47
PDLIM7-206ENST00000463411 POLKQ9UBT6 870 aa30.46■■■□□ 2.47
PDLIM7-206ENST00000463411 QSER1Q2KHR3 1735 aa30.45■■■□□ 2.47
PDLIM7-206ENST00000463411 TNNT2P45379 298 aaPredicted RBP30.45■■■□□ 2.47
PDLIM7-206ENST00000463411 MTFR1LQ9H019 292 aa30.44■■■□□ 2.46
PDLIM7-206ENST00000463411 ZNF827Q17R98 1081 aa30.42■■■□□ 2.46
PDLIM7-206ENST00000463411 ATF5Q9Y2D1 282 aaPredicted RBP30.42■■■□□ 2.46
PDLIM7-206ENST00000463411 SPG7Q9UQ90 795 aa30.4■■■□□ 2.46
PDLIM7-206ENST00000463411 EYA1Q99502 592 aa30.39■■■□□ 2.46
PDLIM7-206ENST00000463411 TOGARAM1Q9Y4F4 1720 aa30.39■■■□□ 2.45
PDLIM7-206ENST00000463411 DCAF8L1A6NGE4 600 aa30.38■■■□□ 2.45
PDLIM7-206ENST00000463411 PTGER2P43116 358 aa30.38■■■□□ 2.45
PDLIM7-206ENST00000463411 AKT1S1Q96B36 256 aa30.38■■■□□ 2.45
PDLIM7-206ENST00000463411 CCNL1Q9UK58 526 aaPredicted RBP30.38■■■□□ 2.45
PDLIM7-206ENST00000463411 CYP27B1O15528 508 aa30.37■■■□□ 2.45
PDLIM7-206ENST00000463411 KNSTRNQ9Y448 316 aa30.37■■■□□ 2.45
PDLIM7-206ENST00000463411 ITGB4P16144 1822 aa30.37■■■□□ 2.45
PDLIM7-206ENST00000463411 TUBGCP6Q96RT7 1819 aa30.37■■■□□ 2.45
PDLIM7-206ENST00000463411 EIF4A2Q14240 407 aaKnown RBP30.35■■■□□ 2.45
PDLIM7-206ENST00000463411 MORC1Q86VD1 984 aa30.35■■■□□ 2.45
PDLIM7-206ENST00000463411 C5P01031 1676 aa30.34■■■□□ 2.45
PDLIM7-206ENST00000463411 KCNQ4P56696 695 aa30.34■■■□□ 2.45
PDLIM7-206ENST00000463411 TFCP2L1Q9NZI6 479 aa30.34■■■□□ 2.45
PDLIM7-206ENST00000463411 MPRIPQ6WCQ1 1025 aa30.33■■■□□ 2.45
PDLIM7-206ENST00000463411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.33■■■□□ 2.45
PDLIM7-206ENST00000463411 PLEKHG2Q9H7P9 1386 aa30.32■■■□□ 2.44
PDLIM7-206ENST00000463411 HMGB2P26583 209 aaKnown RBP30.32■■■□□ 2.44
PDLIM7-206ENST00000463411 PALLDQ8WX93 1383 aa30.31■■■□□ 2.44
PDLIM7-206ENST00000463411 KIF7Q2M1P5 1343 aa30.3■■■□□ 2.44
PDLIM7-206ENST00000463411 PNPLA7Q6ZV29 1317 aa30.3■■■□□ 2.44
PDLIM7-206ENST00000463411 SLC16A10Q8TF71 515 aa30.3■■■□□ 2.44
PDLIM7-206ENST00000463411 IGSF1Q8N6C5 1336 aa30.28■■■□□ 2.44
PDLIM7-206ENST00000463411 NKX1-1Q15270 411 aaPredicted RBP30.28■■■□□ 2.44
PDLIM7-206ENST00000463411 SMARCC1Q92922 1105 aaPredicted RBP30.28■■■□□ 2.44
PDLIM7-206ENST00000463411 SGIP1Q9BQI5 828 aa30.28■■■□□ 2.44
PDLIM7-206ENST00000463411 IFNL2Q8IZJ0 200 aa30.27■■■□□ 2.44
PDLIM7-206ENST00000463411 TAF1LQ8IZX4 1826 aa30.26■■■□□ 2.44
PDLIM7-206ENST00000463411 ARXQ96QS3 562 aa30.26■■■□□ 2.43
PDLIM7-206ENST00000463411 FHDC1Q9C0D6 1143 aaPredicted RBP30.25■■■□□ 2.43
PDLIM7-206ENST00000463411 COL24A1Q17RW2 1714 aa30.25■■■□□ 2.43
PDLIM7-206ENST00000463411 PHKG2P15735 406 aa30.24■■■□□ 2.43
PDLIM7-206ENST00000463411 POLD1P28340 1107 aa30.23■■■□□ 2.43
PDLIM7-206ENST00000463411 TMOD3Q9NYL9 352 aa30.23■■■□□ 2.43
PDLIM7-206ENST00000463411 PIGBQ92521 554 aa30.22■■■□□ 2.43
PDLIM7-206ENST00000463411 ZEB1P37275 1124 aaPredicted RBP30.21■■■□□ 2.43
PDLIM7-206ENST00000463411 SYT17Q9BSW7 474 aa30.21■■■□□ 2.43
PDLIM7-206ENST00000463411 MSH5O43196 834 aa30.2■■■□□ 2.43
PDLIM7-206ENST00000463411 AMER1Q5JTC6 1135 aaPredicted RBP30.2■■■□□ 2.43
PDLIM7-206ENST00000463411 C4BP0C0L5 1744 aa30.19■■■□□ 2.42
PDLIM7-206ENST00000463411 MAP3K5Q99683 1374 aa30.18■■■□□ 2.42
PDLIM7-206ENST00000463411 PLEKHO1Q53GL0 409 aaPredicted RBP30.17■■■□□ 2.42
PDLIM7-206ENST00000463411 HSP90AB1P08238 724 aaKnown RBP30.16■■■□□ 2.42
PDLIM7-206ENST00000463411 AMOTQ4VCS5 1084 aa30.16■■■□□ 2.42
PDLIM7-206ENST00000463411 YY1P25490 414 aa30.15■■■□□ 2.42
PDLIM7-206ENST00000463411 FLAD1Q8NFF5 587 aa30.15■■■□□ 2.42
PDLIM7-206ENST00000463411 COL23A1Q86Y22 540 aaPredicted RBP30.14■■■□□ 2.42
PDLIM7-206ENST00000463411 AK7Q96M32 723 aa30.14■■■□□ 2.42
PDLIM7-206ENST00000463411 KLHL34Q8N239 644 aa30.13■■■□□ 2.41
PDLIM7-206ENST00000463411 LOC102724428A0A0B4J2F2 783 aa30.12■■■□□ 2.41
PDLIM7-206ENST00000463411 SIK1P57059 783 aa30.12■■■□□ 2.41
PDLIM7-206ENST00000463411 ZNF530Q6P9A1 599 aaPredicted RBP30.12■■■□□ 2.41
PDLIM7-206ENST00000463411 DCAF5Q96JK2 942 aa30.12■■■□□ 2.41
PDLIM7-206ENST00000463411 AEBP1Q8IUX7 1158 aa30.11■■■□□ 2.41
PDLIM7-206ENST00000463411 UBR3Q6ZT12 1888 aa30.1■■■□□ 2.41
PDLIM7-206ENST00000463411 ERVV-2B6SEH9 535 aa30.1■■■□□ 2.41
PDLIM7-206ENST00000463411 C1orf141Q5JVX7 400 aa30.1■■■□□ 2.41
PDLIM7-206ENST00000463411 SULT6B1Q6IMI4 303 aa30.1■■■□□ 2.41
PDLIM7-206ENST00000463411 IL13P35225 146 aa30.09■■■□□ 2.41
PDLIM7-206ENST00000463411 KDRP35968 1356 aa30.09■■■□□ 2.41
PDLIM7-206ENST00000463411 CC2D1BQ5T0F9 858 aaKnown RBP30.09■■■□□ 2.41
PDLIM7-206ENST00000463411 ASAP1Q9ULH1 1129 aa30.09■■■□□ 2.41
PDLIM7-206ENST00000463411 PER1O15534 1290 aaPredicted RBP30.08■■■□□ 2.41
PDLIM7-206ENST00000463411 MTHFSP49914 203 aa30.07■■■□□ 2.4
PDLIM7-206ENST00000463411 KDM6AO15550 1401 aaPredicted RBP30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms