RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 IPO8O15397 1037 aaKnown RBP16.36■□□□□ 0.21
VAPB-203ENST00000463370 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
VAPB-203ENST00000463370 ATF3P18847 181 aa16.36■□□□□ 0.21
VAPB-203ENST00000463370 AAMPQ13685 434 aa16.36■□□□□ 0.21
VAPB-203ENST00000463370 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
VAPB-203ENST00000463370 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
VAPB-203ENST00000463370 LTN1O94822 1766 aa16.35■□□□□ 0.21
VAPB-203ENST00000463370 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
VAPB-203ENST00000463370 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
VAPB-203ENST00000463370 DDX19BQ9UMR2 479 aa16.35■□□□□ 0.21
VAPB-203ENST00000463370 MSH6P52701 1360 aa16.34■□□□□ 0.21
VAPB-203ENST00000463370 USP19O94966 1318 aa16.33■□□□□ 0.21
VAPB-203ENST00000463370 SLIT3O75094 1523 aa16.33■□□□□ 0.21
VAPB-203ENST00000463370 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.21
VAPB-203ENST00000463370 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.2
VAPB-203ENST00000463370 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.2
VAPB-203ENST00000463370 AXIN2Q9Y2T1 843 aa16.33■□□□□ 0.2
VAPB-203ENST00000463370 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
VAPB-203ENST00000463370 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
VAPB-203ENST00000463370 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
VAPB-203ENST00000463370 ARHGAP45Q92619 1136 aa16.31■□□□□ 0.2
VAPB-203ENST00000463370 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
VAPB-203ENST00000463370 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
VAPB-203ENST00000463370 ABCC4O15439 1325 aa16.3■□□□□ 0.2
VAPB-203ENST00000463370 DCCP43146 1447 aa16.3■□□□□ 0.2
VAPB-203ENST00000463370 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
VAPB-203ENST00000463370 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
VAPB-203ENST00000463370 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
VAPB-203ENST00000463370 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
VAPB-203ENST00000463370 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
VAPB-203ENST00000463370 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
VAPB-203ENST00000463370 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
VAPB-203ENST00000463370 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
VAPB-203ENST00000463370 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
VAPB-203ENST00000463370 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
VAPB-203ENST00000463370 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
VAPB-203ENST00000463370 ANKRD24Q8TF21 1146 aa16.28■□□□□ 0.2
VAPB-203ENST00000463370 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
VAPB-203ENST00000463370 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
VAPB-203ENST00000463370 PHRF1Q9P1Y6 1649 aaKnown RBP16.28■□□□□ 0.2
VAPB-203ENST00000463370 ZNF335Q9H4Z2 1342 aaPredicted RBP16.27■□□□□ 0.19
VAPB-203ENST00000463370 RGS12O14924 1447 aa16.26■□□□□ 0.19
VAPB-203ENST00000463370 LRRC37A3O60309 1634 aa16.26■□□□□ 0.19
VAPB-203ENST00000463370 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
VAPB-203ENST00000463370 FAM161AQ3B820 660 aa16.26■□□□□ 0.19
VAPB-203ENST00000463370 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
VAPB-203ENST00000463370 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
VAPB-203ENST00000463370 STRCQ7RTU9 1775 aa16.25■□□□□ 0.19
VAPB-203ENST00000463370 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
VAPB-203ENST00000463370 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
VAPB-203ENST00000463370 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
VAPB-203ENST00000463370 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
VAPB-203ENST00000463370 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
VAPB-203ENST00000463370 G2E3Q7L622 706 aa16.23■□□□□ 0.19
VAPB-203ENST00000463370 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
VAPB-203ENST00000463370 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
VAPB-203ENST00000463370 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
VAPB-203ENST00000463370 ERBB3P21860 1342 aa16.23■□□□□ 0.19
VAPB-203ENST00000463370 NCAPD2Q15021 1401 aa16.23■□□□□ 0.19
VAPB-203ENST00000463370 PXDNQ92626 1479 aa16.22■□□□□ 0.19
VAPB-203ENST00000463370 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
VAPB-203ENST00000463370 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
VAPB-203ENST00000463370 XIRP1Q702N8 1843 aaKnown RBP16.21■□□□□ 0.19
VAPB-203ENST00000463370 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
VAPB-203ENST00000463370 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
VAPB-203ENST00000463370 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
VAPB-203ENST00000463370 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
VAPB-203ENST00000463370 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
VAPB-203ENST00000463370 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.18
VAPB-203ENST00000463370 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
VAPB-203ENST00000463370 CHRNA2Q15822 529 aa16.2■□□□□ 0.18
VAPB-203ENST00000463370 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
VAPB-203ENST00000463370 PLEKHO1Q53GL0 409 aaPredicted RBP16.19■□□□□ 0.18
VAPB-203ENST00000463370 F6X3S4 739 aa16.19■□□□□ 0.18
VAPB-203ENST00000463370 KCNQ3O43525 872 aa16.19■□□□□ 0.18
VAPB-203ENST00000463370 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
VAPB-203ENST00000463370 PTPRCP08575 1304 aa16.18■□□□□ 0.18
VAPB-203ENST00000463370 SEC24BO95487 1268 aa16.17■□□□□ 0.18
VAPB-203ENST00000463370 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
VAPB-203ENST00000463370 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
VAPB-203ENST00000463370 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
VAPB-203ENST00000463370 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
VAPB-203ENST00000463370 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
VAPB-203ENST00000463370 RGPD5Q99666 1765 aa16.16■□□□□ 0.18
VAPB-203ENST00000463370 NUCB1Q02818 461 aa16.15■□□□□ 0.18
VAPB-203ENST00000463370 MEIS3Q99687 375 aa16.15■□□□□ 0.18
VAPB-203ENST00000463370 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
VAPB-203ENST00000463370 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
VAPB-203ENST00000463370 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
VAPB-203ENST00000463370 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
VAPB-203ENST00000463370 FLIIQ13045 1269 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
VAPB-203ENST00000463370 TEFQ10587 303 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.17
VAPB-203ENST00000463370 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
VAPB-203ENST00000463370 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms