RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
SND1-203ENST00000463020 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
SND1-203ENST00000463020 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
SND1-203ENST00000463020 CEP350Q5VT06 3117 aa22.25■■□□□ 1.15
SND1-203ENST00000463020 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
SND1-203ENST00000463020 GPR162Q16538 588 aa22.24■■□□□ 1.15
SND1-203ENST00000463020 C1QTNF8P60827 252 aa22.23■■□□□ 1.15
SND1-203ENST00000463020 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
SND1-203ENST00000463020 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
SND1-203ENST00000463020 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
SND1-203ENST00000463020 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
SND1-203ENST00000463020 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
SND1-203ENST00000463020 RRS1Q15050 365 aaKnown RBP22.2■■□□□ 1.14
SND1-203ENST00000463020 NBPF6Q5VWK0 638 aa22.2■■□□□ 1.14
SND1-203ENST00000463020 ZCRB1Q8TBF4 217 aaKnown RBP22.2■■□□□ 1.14
SND1-203ENST00000463020 SLC16A10Q8TF71 515 aa22.2■■□□□ 1.14
SND1-203ENST00000463020 NBPF4Q96M43 638 aa22.2■■□□□ 1.14
SND1-203ENST00000463020 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.142e-15■□□□□ 8.1
SND1-203ENST00000463020 COG3Q96JB2 828 aa22.19■■□□□ 1.14
SND1-203ENST00000463020 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
SND1-203ENST00000463020 POLD1P28340 1107 aa22.18■■□□□ 1.14
SND1-203ENST00000463020 AMPHP49418 695 aa22.18■■□□□ 1.14
SND1-203ENST00000463020 COL23A1Q86Y22 540 aaPredicted RBP22.18■■□□□ 1.14
SND1-203ENST00000463020 CCNL1Q9UK58 526 aaPredicted RBP22.18■■□□□ 1.14
SND1-203ENST00000463020 MSL1Q68DK7 614 aa22.17■■□□□ 1.14
SND1-203ENST00000463020 TONSLQ96HA7 1378 aa22.16■■□□□ 1.14
SND1-203ENST00000463020 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
SND1-203ENST00000463020 AMIGO3Q86WK7 504 aa22.14■■□□□ 1.13
SND1-203ENST00000463020 RTL1A6NKG5 1358 aa22.13■■□□□ 1.13
SND1-203ENST00000463020 FYB1O15117 783 aa22.13■■□□□ 1.13
SND1-203ENST00000463020 TOGARAM1Q9Y4F4 1720 aa22.12■■□□□ 1.13
SND1-203ENST00000463020 C5P01031 1676 aa22.12■■□□□ 1.13
SND1-203ENST00000463020 SMIM5Q71RC9 77 aa22.12■■□□□ 1.13
SND1-203ENST00000463020 MSH5O43196 834 aa22.11■■□□□ 1.13
SND1-203ENST00000463020 HSP90AB2PQ58FF8 381 aa22.11■■□□□ 1.13
SND1-203ENST00000463020 USP47Q96K76 1375 aa22.11■■□□□ 1.13
SND1-203ENST00000463020 GIGYF1O75420 1035 aaPredicted RBP22.09■■□□□ 1.13
SND1-203ENST00000463020 CYP27B1O15528 508 aa22.07■■□□□ 1.12
SND1-203ENST00000463020 TAF1LQ8IZX4 1826 aa22.07■■□□□ 1.12
SND1-203ENST00000463020 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
SND1-203ENST00000463020 INSRP06213 1382 aa22.05■■□□□ 1.12
SND1-203ENST00000463020 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
SND1-203ENST00000463020 KIF20BQ96Q89 1820 aa22.04■■□□□ 1.12
SND1-203ENST00000463020 TATP17735 454 aaPredicted RBP22.04■■□□□ 1.12
SND1-203ENST00000463020 MPRIPQ6WCQ1 1025 aa22.04■■□□□ 1.12
SND1-203ENST00000463020 ATP10DQ9P241 1426 aa22.04■■□□□ 1.12
SND1-203ENST00000463020 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
SND1-203ENST00000463020 CGNL1Q0VF96 1302 aa22.03■■□□□ 1.12
SND1-203ENST00000463020 PCDH11XQ9BZA7 1347 aa22.03■■□□□ 1.12
SND1-203ENST00000463020 PCDH11YQ9BZA8 1340 aa22.03■■□□□ 1.12
SND1-203ENST00000463020 CARD14Q9BXL6 1004 aa22.02■■□□□ 1.12
SND1-203ENST00000463020 WWC3Q9ULE0 1092 aa22.02■■□□□ 1.12
SND1-203ENST00000463020 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
SND1-203ENST00000463020 SMG6Q86US8 1419 aaKnown RBP22.02■■□□□ 1.12
SND1-203ENST00000463020 ITGB4P16144 1822 aa22.01■■□□□ 1.11
SND1-203ENST00000463020 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
SND1-203ENST00000463020 FLT4P35916 1363 aa22■■□□□ 1.11
SND1-203ENST00000463020 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
SND1-203ENST00000463020 PIGBQ92521 554 aa21.99■■□□□ 1.11
SND1-203ENST00000463020 ADCY9O60503 1353 aa21.99■■□□□ 1.11
SND1-203ENST00000463020 UBR3Q6ZT12 1888 aa21.98■■□□□ 1.11
SND1-203ENST00000463020 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
SND1-203ENST00000463020 PHF14O94880 888 aa21.98■■□□□ 1.11
SND1-203ENST00000463020 MAP2P11137 1827 aaKnown RBP21.98■■□□□ 1.11
SND1-203ENST00000463020 TMF1P82094 1093 aa21.97■■□□□ 1.11
SND1-203ENST00000463020 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
SND1-203ENST00000463020 CD2APQ9Y5K6 639 aa21.97■■□□□ 1.11
SND1-203ENST00000463020 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
SND1-203ENST00000463020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
SND1-203ENST00000463020 ZNF526Q8TF50 670 aaPredicted RBP21.94■■□□□ 1.1
SND1-203ENST00000463020 AK7Q96M32 723 aa21.94■■□□□ 1.1
SND1-203ENST00000463020 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
SND1-203ENST00000463020 ITPK1Q13572 414 aa21.93■■□□□ 1.1
SND1-203ENST00000463020 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
SND1-203ENST00000463020 KIF24Q5T7B8 1368 aa21.92■■□□□ 1.1
SND1-203ENST00000463020 NKX1-1Q15270 411 aaPredicted RBP21.92■■□□□ 1.1
SND1-203ENST00000463020 FLAD1Q8NFF5 587 aa21.91■■□□□ 1.1
SND1-203ENST00000463020 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
SND1-203ENST00000463020 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
SND1-203ENST00000463020 EYA1Q99502 592 aa21.9■■□□□ 1.1
SND1-203ENST00000463020 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.09
SND1-203ENST00000463020 SIK1P57059 783 aa21.89■■□□□ 1.09
SND1-203ENST00000463020 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
SND1-203ENST00000463020 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
SND1-203ENST00000463020 GPBP1L1Q9HC44 474 aaPredicted RBP21.88■■□□□ 1.09
SND1-203ENST00000463020 KIAA1551Q9HCM1 1747 aa21.87■■□□□ 1.09
SND1-203ENST00000463020 WASHC2AQ641Q2 1341 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 GNPATO15228 680 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 PHKG2P15735 406 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 SSFA2P28290 1259 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 IFFO2Q5TF58 517 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 ATG3Q9NT62 314 aa21.85■■□□□ 1.09
SND1-203ENST00000463020 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
SND1-203ENST00000463020 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
SND1-203ENST00000463020 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
SND1-203ENST00000463020 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
SND1-203ENST00000463020 KDRP35968 1356 aa21.83■■□□□ 1.08
SND1-203ENST00000463020 CICQ96RK0 1608 aaPredicted RBP21.83■■□□□ 1.08
SND1-203ENST00000463020 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms