RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 NEFMP07197 916 aa23.65■■□□□ 1.38
ATPAF2-202ENST00000462733 TCP11L2Q8N4U5 519 aa23.64■■□□□ 1.38
ATPAF2-202ENST00000462733 PHACTR3Q96KR7 559 aa23.64■■□□□ 1.38
ATPAF2-202ENST00000462733 MEGF6O75095 1541 aa23.63■■□□□ 1.37
ATPAF2-202ENST00000462733 TATP17735 454 aaPredicted RBP23.63■■□□□ 1.37
ATPAF2-202ENST00000462733 TRPC5Q9UL62 973 aaPredicted RBP23.63■■□□□ 1.37
ATPAF2-202ENST00000462733 QTRT2Q9H974 415 aaKnown RBP23.62■■□□□ 1.37
ATPAF2-202ENST00000462733 ATRNO75882 1429 aa23.62■■□□□ 1.37
ATPAF2-202ENST00000462733 APAF1O14727 1248 aa23.62■■□□□ 1.37
ATPAF2-202ENST00000462733 IL2RBP14784 551 aa23.62■■□□□ 1.37
ATPAF2-202ENST00000462733 ZNF772Q68DY9 489 aaPredicted RBP23.61■■□□□ 1.37
ATPAF2-202ENST00000462733 THRAP3Q9Y2W1 955 aaKnown RBP23.6■■□□□ 1.37
ATPAF2-202ENST00000462733 GJD4Q96KN9 370 aaPredicted RBP23.59■■□□□ 1.37
ATPAF2-202ENST00000462733 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
ATPAF2-202ENST00000462733 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
ATPAF2-202ENST00000462733 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
ATPAF2-202ENST00000462733 SALL2Q9Y467 1007 aaPredicted RBP23.59■■□□□ 1.37
ATPAF2-202ENST00000462733 PARP4Q9UKK3 1724 aaKnown RBP23.58■■□□□ 1.37
ATPAF2-202ENST00000462733 WNK3Q9BYP7 1800 aa23.58■■□□□ 1.37
ATPAF2-202ENST00000462733 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
ATPAF2-202ENST00000462733 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
ATPAF2-202ENST00000462733 MTHFSDQ2M296 383 aaKnown RBP23.57■■□□□ 1.36
ATPAF2-202ENST00000462733 PLEKHO1Q53GL0 409 aaPredicted RBP23.57■■□□□ 1.36
ATPAF2-202ENST00000462733 GLI3P10071 1580 aa23.56■■□□□ 1.36
ATPAF2-202ENST00000462733 OVOS2A0A0G2JMS6 1433 aa23.56■■□□□ 1.36
ATPAF2-202ENST00000462733 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
ATPAF2-202ENST00000462733 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
ATPAF2-202ENST00000462733 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
ATPAF2-202ENST00000462733 FANCIQ9NVI1 1328 aa23.55■■□□□ 1.36
ATPAF2-202ENST00000462733 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
ATPAF2-202ENST00000462733 AMOTQ4VCS5 1084 aa23.55■■□□□ 1.36
ATPAF2-202ENST00000462733 GAS2L2Q8NHY3 880 aa23.55■■□□□ 1.36
ATPAF2-202ENST00000462733 A0A0G2JS52 829 aa23.54■■□□□ 1.36
ATPAF2-202ENST00000462733 RGS17Q9UGC6 210 aaPredicted RBP23.54■■□□□ 1.36
ATPAF2-202ENST00000462733 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
ATPAF2-202ENST00000462733 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 DLG5Q8TDM6 1919 aa23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 RIPK4P57078 832 aa23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 ZNF530Q6P9A1 599 aaPredicted RBP23.53■■□□□ 1.36
ATPAF2-202ENST00000462733 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
ATPAF2-202ENST00000462733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.51■■□□□ 1.35
ATPAF2-202ENST00000462733 EXOC5O00471 708 aa23.5■■□□□ 1.35
ATPAF2-202ENST00000462733 PLEKHG2Q9H7P9 1386 aa23.49■■□□□ 1.35
ATPAF2-202ENST00000462733 DDB1Q16531 1140 aa23.49■■□□□ 1.35
ATPAF2-202ENST00000462733 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
ATPAF2-202ENST00000462733 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
ATPAF2-202ENST00000462733 RBM6P78332 1123 aaKnown RBP23.48■■□□□ 1.35
ATPAF2-202ENST00000462733 SHANK3Q9BYB0 1731 aa23.48■■□□□ 1.35
ATPAF2-202ENST00000462733 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
ATPAF2-202ENST00000462733 POTEAQ6S8J7 498 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 PCDH11XQ9BZA7 1347 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 PCDH11YQ9BZA8 1340 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 CYP27B1O15528 508 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 AKAP4Q5JQC9 854 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
ATPAF2-202ENST00000462733 MAP3K5Q99683 1374 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 THSD7AQ9UPZ6 1657 aa23.46■■□□□ 1.35
ATPAF2-202ENST00000462733 PHKG2P15735 406 aa23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 RXRBP28702 533 aa23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 SEPT12Q8IYM1 358 aa23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 RTF1Q92541 710 aaKnown RBP23.45■■□□□ 1.34
ATPAF2-202ENST00000462733 MCM10Q7L590 875 aa23.44■■□□□ 1.34
ATPAF2-202ENST00000462733 LMOD3Q0VAK6 560 aa23.43■■□□□ 1.34
ATPAF2-202ENST00000462733 MPRIPQ6WCQ1 1025 aa23.43■■□□□ 1.34
ATPAF2-202ENST00000462733 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
ATPAF2-202ENST00000462733 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
ATPAF2-202ENST00000462733 NGEFQ8N5V2 710 aa23.42■■□□□ 1.34
ATPAF2-202ENST00000462733 CCDC27Q2M243 656 aa23.42■■□□□ 1.34
ATPAF2-202ENST00000462733 VIRMAQ69YN4 1812 aaKnown RBP23.41■■□□□ 1.34
ATPAF2-202ENST00000462733 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
ATPAF2-202ENST00000462733 NCBP3Q53F19 620 aaKnown RBP23.4■■□□□ 1.34
ATPAF2-202ENST00000462733 LGR6Q9HBX8 967 aa23.4■■□□□ 1.34
ATPAF2-202ENST00000462733 HTATSF1O43719 755 aaKnown RBP23.39■■□□□ 1.34
ATPAF2-202ENST00000462733 MARCH10Q8NA82 808 aaPredicted RBP23.39■■□□□ 1.34
ATPAF2-202ENST00000462733 IL17REQ8NFR9 667 aa23.39■■□□□ 1.34
ATPAF2-202ENST00000462733 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.33
ATPAF2-202ENST00000462733 RRP1P56182 461 aaKnown RBP23.39■■□□□ 1.33
ATPAF2-202ENST00000462733 RNMTO43148 476 aaKnown RBP23.38■■□□□ 1.33
ATPAF2-202ENST00000462733 CCDC136Q96JN2 1154 aa23.38■■□□□ 1.33
ATPAF2-202ENST00000462733 KDM6AO15550 1401 aaPredicted RBP23.37■■□□□ 1.33
ATPAF2-202ENST00000462733 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
ATPAF2-202ENST00000462733 ZNF521Q96K83 1311 aa23.37■■□□□ 1.33
ATPAF2-202ENST00000462733 RCAN3Q9UKA8 241 aa23.37■■□□□ 1.33
ATPAF2-202ENST00000462733 DCAF5Q96JK2 942 aa23.36■■□□□ 1.33
ATPAF2-202ENST00000462733 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
ATPAF2-202ENST00000462733 NKX1-1Q15270 411 aaPredicted RBP23.36■■□□□ 1.33
ATPAF2-202ENST00000462733 FAM182BQ5T319 152 aa23.34■■□□□ 1.33
ATPAF2-202ENST00000462733 RGS12O14924 1447 aa23.34■■□□□ 1.33
ATPAF2-202ENST00000462733 WDR63Q8IWG1 891 aa23.33■■□□□ 1.33
ATPAF2-202ENST00000462733 CEMIPQ8WUJ3 1361 aa23.33■■□□□ 1.33
ATPAF2-202ENST00000462733 GOLGA2Q08379 1002 aa23.33■■□□□ 1.32
ATPAF2-202ENST00000462733 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms