RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
SRRM1-205ENST00000462710 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
SRRM1-205ENST00000462710 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
SRRM1-205ENST00000462710 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
SRRM1-205ENST00000462710 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
SRRM1-205ENST00000462710 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 RGPD2P0DJD1 1756 aa12.87□□□□□ -0.35
SRRM1-205ENST00000462710 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
SRRM1-205ENST00000462710 NME9Q86XW9 330 aa12.86□□□□□ -0.35
SRRM1-205ENST00000462710 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
SRRM1-205ENST00000462710 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
SRRM1-205ENST00000462710 MEGF6O75095 1541 aa12.85□□□□□ -0.35
SRRM1-205ENST00000462710 KIF20BQ96Q89 1820 aa12.85□□□□□ -0.35
SRRM1-205ENST00000462710 ITGB4P16144 1822 aa12.85□□□□□ -0.35
SRRM1-205ENST00000462710 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
SRRM1-205ENST00000462710 HOXC9P31274 260 aa12.84□□□□□ -0.35
SRRM1-205ENST00000462710 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
SRRM1-205ENST00000462710 USP47Q96K76 1375 aa12.84□□□□□ -0.35
SRRM1-205ENST00000462710 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
SRRM1-205ENST00000462710 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
SRRM1-205ENST00000462710 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRRM1-205ENST00000462710 HSPA6P17066 643 aa12.83□□□□□ -0.36
SRRM1-205ENST00000462710 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-205ENST00000462710 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-205ENST00000462710 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
SRRM1-205ENST00000462710 INSRP06213 1382 aa12.82□□□□□ -0.36
SRRM1-205ENST00000462710 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
SRRM1-205ENST00000462710 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
SRRM1-205ENST00000462710 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
SRRM1-205ENST00000462710 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
SRRM1-205ENST00000462710 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
SRRM1-205ENST00000462710 COG3Q96JB2 828 aa12.81□□□□□ -0.36
SRRM1-205ENST00000462710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRRM1-205ENST00000462710 SSFA2P28290 1259 aa12.79□□□□□ -0.36
SRRM1-205ENST00000462710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.364e-7■■□□□ 14.5
SRRM1-205ENST00000462710 ARFGEF1Q9Y6D6 1849 aa12.78□□□□□ -0.36
SRRM1-205ENST00000462710 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
SRRM1-205ENST00000462710 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
SRRM1-205ENST00000462710 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
SRRM1-205ENST00000462710 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.36
SRRM1-205ENST00000462710 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.36
SRRM1-205ENST00000462710 TONSLQ96HA7 1378 aa12.77□□□□□ -0.36
SRRM1-205ENST00000462710 SOX12O15370 315 aa12.77□□□□□ -0.37
SRRM1-205ENST00000462710 FLT4P35916 1363 aa12.77□□□□□ -0.37
SRRM1-205ENST00000462710 APLP1P51693 650 aa12.76□□□□□ -0.37
SRRM1-205ENST00000462710 TESK2Q96S53 571 aa12.76□□□□□ -0.37
SRRM1-205ENST00000462710 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
SRRM1-205ENST00000462710 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
SRRM1-205ENST00000462710 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
SRRM1-205ENST00000462710 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
SRRM1-205ENST00000462710 AMPHP49418 695 aa12.75□□□□□ -0.37
SRRM1-205ENST00000462710 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
SRRM1-205ENST00000462710 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
SRRM1-205ENST00000462710 TGFB2P61812 414 aa12.75□□□□□ -0.37
SRRM1-205ENST00000462710 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
SRRM1-205ENST00000462710 KIF3CO14782 793 aa12.74□□□□□ -0.37
SRRM1-205ENST00000462710 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
SRRM1-205ENST00000462710 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
SRRM1-205ENST00000462710 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 TMC1Q8TDI8 760 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 ADRA2BP18089 450 aa12.73□□□□□ -0.37
SRRM1-205ENST00000462710 KDRP35968 1356 aa12.72□□□□□ -0.37
SRRM1-205ENST00000462710 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
SRRM1-205ENST00000462710 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
SRRM1-205ENST00000462710 AK7Q96M32 723 aa12.72□□□□□ -0.37
SRRM1-205ENST00000462710 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
SRRM1-205ENST00000462710 CDCA8Q53HL2 280 aa12.71□□□□□ -0.38
SRRM1-205ENST00000462710 FYB1O15117 783 aa12.7□□□□□ -0.38
SRRM1-205ENST00000462710 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
SRRM1-205ENST00000462710 ZC3H4Q9UPT8 1303 aaKnown RBP12.7□□□□□ -0.38
SRRM1-205ENST00000462710 FSTL1Q12841 308 aa12.7□□□□□ -0.38
SRRM1-205ENST00000462710 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
SRRM1-205ENST00000462710 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
SRRM1-205ENST00000462710 SPG7Q9UQ90 795 aa12.7□□□□□ -0.38
SRRM1-205ENST00000462710 TOMM70O94826 608 aa12.69□□□□□ -0.38
SRRM1-205ENST00000462710 JMYQ8N9B5 988 aa12.69□□□□□ -0.38
SRRM1-205ENST00000462710 CYP27B1O15528 508 aa12.69□□□□□ -0.38
SRRM1-205ENST00000462710 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
SRRM1-205ENST00000462710 DNAJC5GQ8N7S2 189 aa12.68□□□□□ -0.38
SRRM1-205ENST00000462710 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
SRRM1-205ENST00000462710 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
SRRM1-205ENST00000462710 MSH5O43196 834 aa12.67□□□□□ -0.38
SRRM1-205ENST00000462710 NLGN1Q8N2Q7 840 aa12.67□□□□□ -0.38
SRRM1-205ENST00000462710 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 PIGBQ92521 554 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
SRRM1-205ENST00000462710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
SRRM1-205ENST00000462710 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 SIK1P57059 783 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 TMF1P82094 1093 aa12.66□□□□□ -0.38
SRRM1-205ENST00000462710 KCNQ4P56696 695 aa12.65□□□□□ -0.38
SRRM1-205ENST00000462710 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms