RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PNMA1Q8ND90 353 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 ADAM32Q8TC27 787 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 TLL2Q9Y6L7 1015 aa7.12□□□□□ -1.27
CSMD3-205ENST00000462254 PLB1Q6P1J6 1458 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 CASKIN1Q8WXD9 1431 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 J3QL48 77 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 ERFEQ4G0M1 354 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 TMCO4Q5TGY1 634 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 AEBP1Q8IUX7 1158 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 CYP4X1Q8N118 509 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 C1QTNF2Q9BXJ5 285 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 GPSM3Q9Y4H4 160 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 ADCY10Q96PN6 1610 aa7.11□□□□□ -1.27
CSMD3-205ENST00000462254 ALDH1A1P00352 501 aa7.1□□□□□ -1.27
CSMD3-205ENST00000462254 ZBTB33Q86T24 672 aa7.1□□□□□ -1.27
CSMD3-205ENST00000462254 SNIP1Q8TAD8 396 aaKnown RBP7.1□□□□□ -1.27
CSMD3-205ENST00000462254 FAM174AQ8TBP5 190 aa7.1□□□□□ -1.27
CSMD3-205ENST00000462254 IRX2Q9BZI1 471 aaPredicted RBP7.1□□□□□ -1.27
CSMD3-205ENST00000462254 PRM3Q9NNZ6 103 aa7.1□□□□□ -1.27
CSMD3-205ENST00000462254 CDK13Q14004 1512 aaKnown RBP7.1□□□□□ -1.27
CSMD3-205ENST00000462254 NUP153P49790 1475 aaKnown RBP7.1□□□□□ -1.27
CSMD3-205ENST00000462254 ZCCHC11Q5TAX3 1644 aaKnown RBP7.09□□□□□ -1.27
CSMD3-205ENST00000462254 TTC24A2A3L6 582 aaPredicted RBP7.09□□□□□ -1.27
CSMD3-205ENST00000462254 ARID5BQ14865 1188 aa7.09□□□□□ -1.27
CSMD3-205ENST00000462254 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
CSMD3-205ENST00000462254 CCDC97Q96F63 343 aaPredicted RBP7.09□□□□□ -1.27
CSMD3-205ENST00000462254 MAP3K1Q13233 1512 aa7.09□□□□□ -1.27
CSMD3-205ENST00000462254 ABCC2Q92887 1545 aa7.09□□□□□ -1.27
CSMD3-205ENST00000462254 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
CSMD3-205ENST00000462254 EPRSP07814 1512 aaKnown RBP7.08□□□□□ -1.28
CSMD3-205ENST00000462254 MAGI3Q5TCQ9 1506 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 SMPD1P17405 629 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 GRM5P41594 1212 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 VAC14Q08AM6 782 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 NR1H3Q13133 447 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 TRMT44Q8IYL2 757 aaKnown RBP7.08□□□□□ -1.28
CSMD3-205ENST00000462254 CDK15Q96Q40 435 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 PTPRGP23470 1445 aa7.08□□□□□ -1.28
CSMD3-205ENST00000462254 CCDC18Q5T9S5 1454 aa7.07□□□□□ -1.28
CSMD3-205ENST00000462254 NRG2O14511 850 aaPredicted RBP7.07□□□□□ -1.28
CSMD3-205ENST00000462254 IGSF3O75054 1194 aa7.07□□□□□ -1.28
CSMD3-205ENST00000462254 MFAP1P55081 439 aaKnown RBP7.07□□□□□ -1.28
CSMD3-205ENST00000462254 SUPT6HQ7KZ85 1726 aaKnown RBP7.07□□□□□ -1.28
CSMD3-205ENST00000462254 FNBP4Q8N3X1 1017 aaPredicted RBP7.06□□□□□ -1.28
CSMD3-205ENST00000462254 MPNDQ8N594 471 aa7.06□□□□□ -1.28
CSMD3-205ENST00000462254 ZNF777Q9ULD5 760 aaPredicted RBP7.06□□□□□ -1.28
CSMD3-205ENST00000462254 PCDHB9Q9Y5E1 797 aa7.06□□□□□ -1.28
CSMD3-205ENST00000462254 UACAQ9BZF9 1416 aa7.06□□□□□ -1.28
CSMD3-205ENST00000462254 EHBP1L1Q8N3D4 1523 aa7.06□□□□□ -1.28
CSMD3-205ENST00000462254 UHRF1BP1LA0JNW5 1464 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 FAM187AA6NFU0 413 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 ADH1CP00326 375 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 VASH1Q7L8A9 365 aaPredicted RBP7.05□□□□□ -1.28
CSMD3-205ENST00000462254 DZIP3Q86Y13 1208 aaKnown RBP7.05□□□□□ -1.28
CSMD3-205ENST00000462254 HPS1Q92902 700 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 SLC10A4Q96EP9 437 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 KIF14Q15058 1648 aa7.05□□□□□ -1.28
CSMD3-205ENST00000462254 LRRC9Q6ZRR7 1453 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 POM121CA8CG34 1229 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 NR3C2P08235 984 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 RETREG2Q8NC44 543 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
CSMD3-205ENST00000462254 GZF1Q9H116 711 aaPredicted RBP7.04□□□□□ -1.28
CSMD3-205ENST00000462254 WASF2Q9Y6W5 498 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 KDM5BQ9UGL1 1544 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 ATP10BO94823 1461 aa7.04□□□□□ -1.28
CSMD3-205ENST00000462254 FSHRP23945 695 aa7.03□□□□□ -1.28
CSMD3-205ENST00000462254 NNTQ13423 1086 aa7.03□□□□□ -1.28
CSMD3-205ENST00000462254 LAPTM4AQ15012 233 aa7.03□□□□□ -1.28
CSMD3-205ENST00000462254 WASHC4Q2M389 1173 aa7.03□□□□□ -1.28
CSMD3-205ENST00000462254 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
CSMD3-205ENST00000462254 PPARGC1BQ86YN6 1023 aaKnown RBP7.03□□□□□ -1.28
CSMD3-205ENST00000462254 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
CSMD3-205ENST00000462254 LCE2BO14633 110 aa7.02□□□□□ -1.29
CSMD3-205ENST00000462254 GIGYF1O75420 1035 aaPredicted RBP7.02□□□□□ -1.29
CSMD3-205ENST00000462254 DGAT1O75907 488 aa7.02□□□□□ -1.29
CSMD3-205ENST00000462254 RBM25P49756 843 aaKnown RBP7.02□□□□□ -1.29
CSMD3-205ENST00000462254 PKDCCQ504Y2 493 aa7.02□□□□□ -1.29
CSMD3-205ENST00000462254 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
CSMD3-205ENST00000462254 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
CSMD3-205ENST00000462254 MYO5CQ9NQX4 1742 aa7.01□□□□□ -1.29
CSMD3-205ENST00000462254 CDC42BPBQ9Y5S2 1711 aa7.01□□□□□ -1.29
CSMD3-205ENST00000462254 RAB15P59190 212 aa7.01□□□□□ -1.29
CSMD3-205ENST00000462254 EIF4G2P78344 907 aaKnown RBP eCLIP7.01□□□□□ -1.29
CSMD3-205ENST00000462254 ADAMTS19Q8TE59 1207 aa7.01□□□□□ -1.29
CSMD3-205ENST00000462254 TTC37Q6PGP7 1564 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 KIF13AQ9H1H9 1805 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 ESPNB1AK53 854 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 PATL2C9JE40 543 aaKnown RBP7□□□□□ -1.29
CSMD3-205ENST00000462254 MYT1Q01538 1121 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 NR5A1Q13285 461 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 INTS6LQ5JSJ4 861 aaKnown RBP7□□□□□ -1.29
CSMD3-205ENST00000462254 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
CSMD3-205ENST00000462254 Q6ZNB5 142 aa7□□□□□ -1.29
CSMD3-205ENST00000462254 FOXD4L4Q8WXT5 416 aaPredicted RBP7□□□□□ -1.29
CSMD3-205ENST00000462254 KLF16Q9BXK1 252 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms