RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
COPS3-204ENST00000462236 KDM5BQ9UGL1 1544 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 PTPRGP23470 1445 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 WNT7AO00755 349 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 ATP9BO43861 1147 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 PHTF2Q8N3S3 785 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 EHBP1Q8NDI1 1231 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
COPS3-204ENST00000462236 ARID3AQ99856 593 aa8.49□□□□□ -1.05
COPS3-204ENST00000462236 ZCCHC11Q5TAX3 1644 aaKnown RBP8.49□□□□□ -1.05
COPS3-204ENST00000462236 IGF1RP08069 1367 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 PALM3A6NDB9 673 aaPredicted RBP8.48□□□□□ -1.05
COPS3-204ENST00000462236 ESPNB1AK53 854 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 RC3H1Q5TC82 1133 aaKnown RBP8.48□□□□□ -1.05
COPS3-204ENST00000462236 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 ZNF598Q86UK7 904 aaKnown RBP8.48□□□□□ -1.05
COPS3-204ENST00000462236 PLEKHM2Q8IWE5 1019 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 CDK15Q96Q40 435 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 TNIKQ9UKE5 1360 aa8.48□□□□□ -1.05
COPS3-204ENST00000462236 CFAP43Q8NDM7 1665 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 TEX14Q8IWB6 1497 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 RGS20O76081 388 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 CFAP70Q5T0N1 1121 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 HOMEZQ8IX15 550 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 FBXO41Q8TF61 875 aa8.47□□□□□ -1.05
COPS3-204ENST00000462236 TFIP11Q9UBB9 837 aaKnown RBP8.47□□□□□ -1.05
COPS3-204ENST00000462236 DISP1Q96F81 1524 aa8.46□□□□□ -1.05
COPS3-204ENST00000462236 RNF135Q8IUD6 432 aa8.46□□□□□ -1.06
COPS3-204ENST00000462236 MAFBQ9Y5Q3 323 aaPredicted RBP8.46□□□□□ -1.06
COPS3-204ENST00000462236 IQGAP2Q13576 1575 aa8.46□□□□□ -1.06
COPS3-204ENST00000462236 TBC1D9Q6ZT07 1266 aa8.45□□□□□ -1.06
COPS3-204ENST00000462236 PBXIP1Q96AQ6 731 aa8.45□□□□□ -1.06
COPS3-204ENST00000462236 ADAMTSL3P82987 1691 aa8.45□□□□□ -1.06
COPS3-204ENST00000462236 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
COPS3-204ENST00000462236 KIF21BO75037 1637 aa8.44□□□□□ -1.06
COPS3-204ENST00000462236 SIAH2O43255 324 aa8.44□□□□□ -1.06
COPS3-204ENST00000462236 KCTD15Q96SI1 283 aaPredicted RBP8.44□□□□□ -1.06
COPS3-204ENST00000462236 GIGYF1O75420 1035 aaPredicted RBP8.43□□□□□ -1.06
COPS3-204ENST00000462236 SKIP12755 728 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
COPS3-204ENST00000462236 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 VASH1Q7L8A9 365 aaPredicted RBP8.43□□□□□ -1.06
COPS3-204ENST00000462236 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 PRKD2Q9BZL6 878 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
COPS3-204ENST00000462236 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 MAGI3Q5TCQ9 1506 aa8.43□□□□□ -1.06
COPS3-204ENST00000462236 USP17L5A8MUK1 530 aa8.42□□□□□ -1.06
COPS3-204ENST00000462236 SRPK2P78362 688 aaKnown RBP8.42□□□□□ -1.06
COPS3-204ENST00000462236 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
COPS3-204ENST00000462236 PDE4CQ08493 712 aa8.42□□□□□ -1.06
COPS3-204ENST00000462236 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
COPS3-204ENST00000462236 UGGT2Q9NYU1 1516 aa8.42□□□□□ -1.06
COPS3-204ENST00000462236 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 PIK3CDO00329 1044 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 NR5A1Q13285 461 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
COPS3-204ENST00000462236 KIAA0556O60303 1618 aa8.4□□□□□ -1.06
COPS3-204ENST00000462236 WDR7Q9Y4E6 1490 aa8.4□□□□□ -1.06
COPS3-204ENST00000462236 ADH1CP00326 375 aa8.4□□□□□ -1.06
COPS3-204ENST00000462236 EML3Q32P44 896 aa8.4□□□□□ -1.06
COPS3-204ENST00000462236 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
COPS3-204ENST00000462236 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 GRM5P41594 1212 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 TRIM50Q86XT4 487 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 SNIP1Q8TAD8 396 aaKnown RBP8.39□□□□□ -1.07
COPS3-204ENST00000462236 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 BCORL1Q5H9F3 1711 aa8.39□□□□□ -1.07
COPS3-204ENST00000462236 ATG7O95352 703 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 PRR20EP86478 221 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 PRR20CP86479 221 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 PRR20DP86480 221 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 PRR20BP86481 221 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 PRR20AP86496 221 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 USP4Q13107 963 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 INTS6LQ5JSJ4 861 aaKnown RBP8.38□□□□□ -1.07
COPS3-204ENST00000462236 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
COPS3-204ENST00000462236 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
COPS3-204ENST00000462236 ARAP3Q8WWN8 1544 aa8.38□□□□□ -1.07
COPS3-204ENST00000462236 RFX1P22670 979 aa8.37□□□□□ -1.07
COPS3-204ENST00000462236 NCOA4Q13772 614 aa8.37□□□□□ -1.07
COPS3-204ENST00000462236 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
COPS3-204ENST00000462236 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
COPS3-204ENST00000462236 NOD1Q9Y239 953 aa8.37□□□□□ -1.07
COPS3-204ENST00000462236 CTTNBP2Q8WZ74 1663 aa8.37□□□□□ -1.07
COPS3-204ENST00000462236 ABCA8O94911 1581 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
COPS3-204ENST00000462236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.36□□□□□ -1.07
COPS3-204ENST00000462236 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 GDF9O60383 454 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 FSHRP23945 695 aa8.36□□□□□ -1.07
COPS3-204ENST00000462236 ATP1A2P50993 1020 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms