RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
PBRM1-219ENST00000462207 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
PBRM1-219ENST00000462207 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
PBRM1-219ENST00000462207 PKD1L3Q7Z443 1732 aa17.79■□□□□ 0.44
PBRM1-219ENST00000462207 ATRNO75882 1429 aa17.78■□□□□ 0.44
PBRM1-219ENST00000462207 IL2RBP14784 551 aa17.78■□□□□ 0.44
PBRM1-219ENST00000462207 DLG5Q8TDM6 1919 aa17.78■□□□□ 0.44
PBRM1-219ENST00000462207 GLI3P10071 1580 aa17.78■□□□□ 0.44
PBRM1-219ENST00000462207 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.43
PBRM1-219ENST00000462207 RIPK4P57078 832 aa17.76■□□□□ 0.43
PBRM1-219ENST00000462207 ZBED9Q6R2W3 1325 aa17.76■□□□□ 0.43
PBRM1-219ENST00000462207 PLEKHO1Q53GL0 409 aaPredicted RBP17.75■□□□□ 0.43
PBRM1-219ENST00000462207 ZNF530Q6P9A1 599 aaPredicted RBP17.75■□□□□ 0.43
PBRM1-219ENST00000462207 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
PBRM1-219ENST00000462207 FAM98CQ17RN3 349 aaKnown RBP17.74■□□□□ 0.43
PBRM1-219ENST00000462207 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
PBRM1-219ENST00000462207 LRRC37A3O60309 1634 aa17.74■□□□□ 0.43
PBRM1-219ENST00000462207 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
PBRM1-219ENST00000462207 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
PBRM1-219ENST00000462207 TRPC5Q9UL62 973 aaPredicted RBP17.74■□□□□ 0.43
PBRM1-219ENST00000462207 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
PBRM1-219ENST00000462207 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
PBRM1-219ENST00000462207 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
PBRM1-219ENST00000462207 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
PBRM1-219ENST00000462207 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
PBRM1-219ENST00000462207 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
PBRM1-219ENST00000462207 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
PBRM1-219ENST00000462207 GJD4Q96KN9 370 aaPredicted RBP17.72■□□□□ 0.43
PBRM1-219ENST00000462207 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
PBRM1-219ENST00000462207 PLEKHG2Q9H7P9 1386 aa17.72■□□□□ 0.43
PBRM1-219ENST00000462207 ZCRB1Q8TBF4 217 aaKnown RBP17.72■□□□□ 0.43
PBRM1-219ENST00000462207 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
PBRM1-219ENST00000462207 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
PBRM1-219ENST00000462207 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.43
PBRM1-219ENST00000462207 CYP27B1O15528 508 aa17.71■□□□□ 0.43
PBRM1-219ENST00000462207 MCM10Q7L590 875 aa17.71■□□□□ 0.43
PBRM1-219ENST00000462207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.436e-7■■■■■ 37.1
PBRM1-219ENST00000462207 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
PBRM1-219ENST00000462207 C1orf141Q5JVX7 400 aa17.7■□□□□ 0.42
PBRM1-219ENST00000462207 RGS17Q9UGC6 210 aaPredicted RBP17.7■□□□□ 0.42
PBRM1-219ENST00000462207 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 PHKG2P15735 406 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
PBRM1-219ENST00000462207 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
PBRM1-219ENST00000462207 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
PBRM1-219ENST00000462207 CDCA7LQ96GN5 454 aa17.68■□□□□ 0.42
PBRM1-219ENST00000462207 A0A0G2JS52 829 aa17.68■□□□□ 0.42
PBRM1-219ENST00000462207 KDM6AO15550 1401 aaPredicted RBP17.68■□□□□ 0.42
PBRM1-219ENST00000462207 MYT1Q01538 1121 aa17.68■□□□□ 0.42
PBRM1-219ENST00000462207 LMOD3Q0VAK6 560 aa17.68■□□□□ 0.42
PBRM1-219ENST00000462207 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
PBRM1-219ENST00000462207 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
PBRM1-219ENST00000462207 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
PBRM1-219ENST00000462207 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
PBRM1-219ENST00000462207 IFNL2Q8IZJ0 200 aa17.67■□□□□ 0.42
PBRM1-219ENST00000462207 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
PBRM1-219ENST00000462207 RTF1Q92541 710 aaKnown RBP17.67■□□□□ 0.42
PBRM1-219ENST00000462207 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
PBRM1-219ENST00000462207 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
PBRM1-219ENST00000462207 DDB1Q16531 1140 aa17.66■□□□□ 0.42
PBRM1-219ENST00000462207 EXOC5O00471 708 aa17.66■□□□□ 0.42
PBRM1-219ENST00000462207 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
PBRM1-219ENST00000462207 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
PBRM1-219ENST00000462207 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
PBRM1-219ENST00000462207 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
PBRM1-219ENST00000462207 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
PBRM1-219ENST00000462207 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
PBRM1-219ENST00000462207 POTEAQ6S8J7 498 aa17.64■□□□□ 0.41
PBRM1-219ENST00000462207 SCN11AQ9UI33 1791 aa17.64■□□□□ 0.41
PBRM1-219ENST00000462207 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
PBRM1-219ENST00000462207 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
PBRM1-219ENST00000462207 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
PBRM1-219ENST00000462207 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
PBRM1-219ENST00000462207 RBM6P78332 1123 aaKnown RBP17.62■□□□□ 0.41
PBRM1-219ENST00000462207 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
PBRM1-219ENST00000462207 SLFN5Q08AF3 891 aa17.61■□□□□ 0.41
PBRM1-219ENST00000462207 DCAF5Q96JK2 942 aa17.61■□□□□ 0.41
PBRM1-219ENST00000462207 MRC1P22897 1456 aa17.61■□□□□ 0.41
PBRM1-219ENST00000462207 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
PBRM1-219ENST00000462207 TSR2Q969E8 191 aaKnown RBP17.6■□□□□ 0.41
PBRM1-219ENST00000462207 DOT1LQ8TEK3 1739 aa17.6■□□□□ 0.41
PBRM1-219ENST00000462207 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
PBRM1-219ENST00000462207 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
PBRM1-219ENST00000462207 IL16Q14005 1332 aa17.6■□□□□ 0.41
PBRM1-219ENST00000462207 SIPA1L3O60292 1781 aaPredicted RBP17.59■□□□□ 0.41
PBRM1-219ENST00000462207 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
PBRM1-219ENST00000462207 BRWD3Q6RI45 1802 aa17.59■□□□□ 0.41
PBRM1-219ENST00000462207 E9PSI1 815 aa17.59■□□□□ 0.41
PBRM1-219ENST00000462207 RXRBP28702 533 aa17.59■□□□□ 0.41
PBRM1-219ENST00000462207 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
PBRM1-219ENST00000462207 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
PBRM1-219ENST00000462207 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.41
PBRM1-219ENST00000462207 RGS12O14924 1447 aa17.58■□□□□ 0.41
PBRM1-219ENST00000462207 ZNF853P0CG23 659 aa17.58■□□□□ 0.4
PBRM1-219ENST00000462207 TEFQ10587 303 aa17.58■□□□□ 0.4
PBRM1-219ENST00000462207 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
PBRM1-219ENST00000462207 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms