RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TECPR2O15040 1411 aa8.78□□□□□ -1
SMARCC1-204ENST00000462198 SHANK3Q9BYB0 1731 aa8.77□□□□□ -1
SMARCC1-204ENST00000462198 ROCK1Q13464 1354 aa8.77□□□□□ -1.01
SMARCC1-204ENST00000462198 ZC3H6P61129 1189 aaKnown RBP8.77□□□□□ -1.01
SMARCC1-204ENST00000462198 PTF1AQ7RTS3 328 aa8.77□□□□□ -1.01
SMARCC1-204ENST00000462198 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1.01
SMARCC1-204ENST00000462198 PCDHB8Q9UN66 801 aa8.77□□□□□ -1.01
SMARCC1-204ENST00000462198 RIOK3O14730 519 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-204ENST00000462198 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
SMARCC1-204ENST00000462198 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
SMARCC1-204ENST00000462198 SIRT1Q96EB6 747 aa8.76□□□□□ -1.01
SMARCC1-204ENST00000462198 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
SMARCC1-204ENST00000462198 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 KIAA0232Q92628 1395 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 MAP3K5Q99683 1374 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 PYGBP11216 843 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 PRELPP51888 382 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 TXNRD1Q16881 649 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 ADGRF5Q8IZF2 1346 aa8.75□□□□□ -1.01
SMARCC1-204ENST00000462198 IFT172Q9UG01 1749 aa8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 PPLO60437 1756 aa8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 HOXB3P14651 431 aaPredicted RBP8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 DNAJC5GQ8N7S2 189 aa8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 THRAP3Q9Y2W1 955 aaKnown RBP8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 ALS2Q96Q42 1657 aa8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 TRPM3Q9HCF6 1732 aaPredicted RBP8.74□□□□□ -1.01
SMARCC1-204ENST00000462198 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
SMARCC1-204ENST00000462198 SLC34A2O95436 690 aa8.73□□□□□ -1.01
SMARCC1-204ENST00000462198 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
SMARCC1-204ENST00000462198 SAFB2Q14151 953 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMARCC1-204ENST00000462198 PCGF6Q9BYE7 350 aa8.73□□□□□ -1.01
SMARCC1-204ENST00000462198 SSH2Q76I76 1423 aa8.72□□□□□ -1.01
SMARCC1-204ENST00000462198 ATP10DQ9P241 1426 aa8.72□□□□□ -1.01
SMARCC1-204ENST00000462198 MKRN3Q13064 507 aaKnown RBP8.72□□□□□ -1.01
SMARCC1-204ENST00000462198 ZNF526Q8TF50 670 aaPredicted RBP8.72□□□□□ -1.01
SMARCC1-204ENST00000462198 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
SMARCC1-204ENST00000462198 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 APLP1P51693 650 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 DDB1Q16531 1140 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 RGL3Q3MIN7 710 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 GOLGB1Q14789 3259 aaKnown RBP8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 YTHDC2Q9H6S0 1430 aaKnown RBP8.71□□□□□ -1.02
SMARCC1-204ENST00000462198 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
SMARCC1-204ENST00000462198 NLGN2Q8NFZ4 835 aa8.7□□□□□ -1.02
SMARCC1-204ENST00000462198 PRAM1Q96QH2 718 aa8.7□□□□□ -1.02
SMARCC1-204ENST00000462198 KNDC1Q76NI1 1749 aa8.7□□□□□ -1.02
SMARCC1-204ENST00000462198 PEAK1Q9H792 1746 aa8.7□□□□□ -1.02
SMARCC1-204ENST00000462198 STK25O00506 426 aa8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 POLD1P28340 1107 aa8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 MARCH10Q8NA82 808 aaPredicted RBP8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.69□□□□□ -1.025e-11■■■■□ 25.8
SMARCC1-204ENST00000462198 POGKQ9P215 609 aa8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 DHX57Q6P158 1386 aaKnown RBP8.69□□□□□ -1.02
SMARCC1-204ENST00000462198 PARP4Q9UKK3 1724 aaKnown RBP8.68□□□□□ -1.02
SMARCC1-204ENST00000462198 DCAF8Q5TAQ9 597 aa8.68□□□□□ -1.02
SMARCC1-204ENST00000462198 ANKARQ7Z5J8 1434 aa8.68□□□□□ -1.02
SMARCC1-204ENST00000462198 ERBB3P21860 1342 aa8.67□□□□□ -1.02
SMARCC1-204ENST00000462198 SLC16A10Q8TF71 515 aa8.67□□□□□ -1.02
SMARCC1-204ENST00000462198 HIRIP3Q9BW71 556 aaPredicted RBP8.67□□□□□ -1.02
SMARCC1-204ENST00000462198 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
SMARCC1-204ENST00000462198 KAT6BQ8WYB5 2073 aa8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 ATP7BP35670 1465 aa8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 KIF3CO14782 793 aa8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 C14orf93Q9H972 538 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-204ENST00000462198 CHRM1P11229 460 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-204ENST00000462198 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
SMARCC1-204ENST00000462198 PHRF1Q9P1Y6 1649 aaKnown RBP8.65□□□□□ -1.03
SMARCC1-204ENST00000462198 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
SMARCC1-204ENST00000462198 BCL9O00512 1426 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 CRB1P82279 1406 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 MINK1Q8N4C8 1332 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 EXOC5O00471 708 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 ZEB1P37275 1124 aaPredicted RBP8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 TOM1L2Q6ZVM7 507 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 ABTB2Q8N961 1025 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 KLRG1Q96E93 195 aa8.63□□□□□ -1.03
SMARCC1-204ENST00000462198 ADCY9O60503 1353 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 CPDO75976 1380 aa8.62□□□□□ -1.03
SMARCC1-204ENST00000462198 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms