RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 SLC27A3Q5K4L6 730 aa16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-203ENST00000462151 PRIM1P49642 420 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-203ENST00000462151 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
SCAMP3-203ENST00000462151 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
SCAMP3-203ENST00000462151 DOT1LQ8TEK3 1739 aa16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 PTGER2P43116 358 aa16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
SCAMP3-203ENST00000462151 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
SCAMP3-203ENST00000462151 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
SCAMP3-203ENST00000462151 EMILIN1Q9Y6C2 1016 aa16.47■□□□□ 0.23
SCAMP3-203ENST00000462151 NSD2O96028 1365 aa16.47■□□□□ 0.23
SCAMP3-203ENST00000462151 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
SCAMP3-203ENST00000462151 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
SCAMP3-203ENST00000462151 SGIP1Q9BQI5 828 aa16.46■□□□□ 0.23
SCAMP3-203ENST00000462151 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
SCAMP3-203ENST00000462151 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
SCAMP3-203ENST00000462151 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCAMP3-203ENST00000462151 LY75O60449 1722 aa16.45■□□□□ 0.22
SCAMP3-203ENST00000462151 YY1P25490 414 aa16.44■□□□□ 0.22
SCAMP3-203ENST00000462151 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
SCAMP3-203ENST00000462151 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SCAMP3-203ENST00000462151 QSER1Q2KHR3 1735 aa16.44■□□□□ 0.22
SCAMP3-203ENST00000462151 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
SCAMP3-203ENST00000462151 ARXQ96QS3 562 aa16.43■□□□□ 0.22
SCAMP3-203ENST00000462151 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
SCAMP3-203ENST00000462151 TFCP2L1Q9NZI6 479 aa16.43■□□□□ 0.22
SCAMP3-203ENST00000462151 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
SCAMP3-203ENST00000462151 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
SCAMP3-203ENST00000462151 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
SCAMP3-203ENST00000462151 KCNQ4P56696 695 aa16.42■□□□□ 0.22
SCAMP3-203ENST00000462151 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
SCAMP3-203ENST00000462151 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
SCAMP3-203ENST00000462151 MAP2P11137 1827 aaKnown RBP16.41■□□□□ 0.22
SCAMP3-203ENST00000462151 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
SCAMP3-203ENST00000462151 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
SCAMP3-203ENST00000462151 CYP27B1O15528 508 aa16.4■□□□□ 0.22
SCAMP3-203ENST00000462151 HMGB2P26583 209 aaKnown RBP16.4■□□□□ 0.22
SCAMP3-203ENST00000462151 POLKQ9UBT6 870 aa16.4■□□□□ 0.22
SCAMP3-203ENST00000462151 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
SCAMP3-203ENST00000462151 POLD1P28340 1107 aa16.39■□□□□ 0.21
SCAMP3-203ENST00000462151 EYA1Q99502 592 aa16.39■□□□□ 0.21
SCAMP3-203ENST00000462151 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
SCAMP3-203ENST00000462151 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
SCAMP3-203ENST00000462151 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
SCAMP3-203ENST00000462151 PANK3Q9H999 370 aa16.37■□□□□ 0.21
SCAMP3-203ENST00000462151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAMP3-203ENST00000462151 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
SCAMP3-203ENST00000462151 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
SCAMP3-203ENST00000462151 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
SCAMP3-203ENST00000462151 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
SCAMP3-203ENST00000462151 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
SCAMP3-203ENST00000462151 MSH5O43196 834 aa16.35■□□□□ 0.21
SCAMP3-203ENST00000462151 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
SCAMP3-203ENST00000462151 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
SCAMP3-203ENST00000462151 C5P01031 1676 aa16.34■□□□□ 0.21
SCAMP3-203ENST00000462151 ITGB4P16144 1822 aa16.34■□□□□ 0.21
SCAMP3-203ENST00000462151 PLEKHG2Q9H7P9 1386 aa16.34■□□□□ 0.21
SCAMP3-203ENST00000462151 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
SCAMP3-203ENST00000462151 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
SCAMP3-203ENST00000462151 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
SCAMP3-203ENST00000462151 UTRNP46939 3433 aa16.32■□□□□ 0.2
SCAMP3-203ENST00000462151 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
SCAMP3-203ENST00000462151 PIGBQ92521 554 aa16.32■□□□□ 0.2
SCAMP3-203ENST00000462151 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
SCAMP3-203ENST00000462151 PHKG2P15735 406 aa16.31■□□□□ 0.2
SCAMP3-203ENST00000462151 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
SCAMP3-203ENST00000462151 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
SCAMP3-203ENST00000462151 TAF1LQ8IZX4 1826 aa16.31■□□□□ 0.2
SCAMP3-203ENST00000462151 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
SCAMP3-203ENST00000462151 GPR162Q16538 588 aa16.29■□□□□ 0.2
SCAMP3-203ENST00000462151 AK7Q96M32 723 aa16.29■□□□□ 0.2
SCAMP3-203ENST00000462151 C4BP0C0L5 1744 aa16.28■□□□□ 0.2
SCAMP3-203ENST00000462151 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
SCAMP3-203ENST00000462151 SIK1P57059 783 aa16.28■□□□□ 0.2
SCAMP3-203ENST00000462151 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
SCAMP3-203ENST00000462151 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-203ENST00000462151 CHD4Q14839 1912 aa16.27■□□□□ 0.19
SCAMP3-203ENST00000462151 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
SCAMP3-203ENST00000462151 ASAP1Q9ULH1 1129 aa16.26■□□□□ 0.19
SCAMP3-203ENST00000462151 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
SCAMP3-203ENST00000462151 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
SCAMP3-203ENST00000462151 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
SCAMP3-203ENST00000462151 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 PHF14O94880 888 aa16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 SSFA2P28290 1259 aa16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 ZNF784Q8NCA9 323 aaPredicted RBP16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 ATG3Q9NT62 314 aa16.24■□□□□ 0.19
SCAMP3-203ENST00000462151 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
SCAMP3-203ENST00000462151 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
SCAMP3-203ENST00000462151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms