RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 RGPD1P0DJD0 1748 aa15.66■□□□□ 0.1
TRAF3IP1-204ENST00000462122 KDRP35968 1356 aa15.66■□□□□ 0.1
TRAF3IP1-204ENST00000462122 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
TRAF3IP1-204ENST00000462122 NUDCQ9Y266 331 aa15.65■□□□□ 0.1
TRAF3IP1-204ENST00000462122 ZCRB1Q8TBF4 217 aaKnown RBP15.64■□□□□ 0.09
TRAF3IP1-204ENST00000462122 BCL9O00512 1426 aa15.63■□□□□ 0.09
TRAF3IP1-204ENST00000462122 SULT6B1Q6IMI4 303 aa15.63■□□□□ 0.09
TRAF3IP1-204ENST00000462122 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
TRAF3IP1-204ENST00000462122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRAF3IP1-204ENST00000462122 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 ANP32CO43423 234 aa15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 FAM182BQ5T319 152 aa15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
TRAF3IP1-204ENST00000462122 PKD1L3Q7Z443 1732 aa15.61■□□□□ 0.09
TRAF3IP1-204ENST00000462122 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
TRAF3IP1-204ENST00000462122 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAF3IP1-204ENST00000462122 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
TRAF3IP1-204ENST00000462122 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
TRAF3IP1-204ENST00000462122 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
TRAF3IP1-204ENST00000462122 HMOX1P09601 288 aa15.59■□□□□ 0.09
TRAF3IP1-204ENST00000462122 PLEKHO1Q53GL0 409 aaPredicted RBP15.59■□□□□ 0.09
TRAF3IP1-204ENST00000462122 SHANK3Q9BYB0 1731 aa15.58■□□□□ 0.08
TRAF3IP1-204ENST00000462122 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
TRAF3IP1-204ENST00000462122 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAF3IP1-204ENST00000462122 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
TRAF3IP1-204ENST00000462122 CYP27B1O15528 508 aa15.56■□□□□ 0.08
TRAF3IP1-204ENST00000462122 FCHSD2O94868 740 aa15.55■□□□□ 0.08
TRAF3IP1-204ENST00000462122 TRIM37O94972 964 aa15.55■□□□□ 0.08
TRAF3IP1-204ENST00000462122 IFNL2Q8IZJ0 200 aa15.55■□□□□ 0.08
TRAF3IP1-204ENST00000462122 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
TRAF3IP1-204ENST00000462122 HSP90AB1P08238 724 aaKnown RBP15.54■□□□□ 0.08
TRAF3IP1-204ENST00000462122 PHKG2P15735 406 aa15.54■□□□□ 0.08
TRAF3IP1-204ENST00000462122 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP1-204ENST00000462122 ZNF530Q6P9A1 599 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP1-204ENST00000462122 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP1-204ENST00000462122 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
TRAF3IP1-204ENST00000462122 C1orf141Q5JVX7 400 aa15.53■□□□□ 0.08
TRAF3IP1-204ENST00000462122 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
TRAF3IP1-204ENST00000462122 NHSQ6T4R5 1651 aa15.53■□□□□ 0.08
TRAF3IP1-204ENST00000462122 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.08
TRAF3IP1-204ENST00000462122 WDR43Q15061 677 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRAF3IP1-204ENST00000462122 ACSBG1Q96GR2 724 aa15.52■□□□□ 0.08
TRAF3IP1-204ENST00000462122 NEFMP07197 916 aa15.51■□□□□ 0.07
TRAF3IP1-204ENST00000462122 BAG6P46379 1132 aa15.51■□□□□ 0.07
TRAF3IP1-204ENST00000462122 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
TRAF3IP1-204ENST00000462122 SBF2Q86WG5 1849 aa15.51■□□□□ 0.07
TRAF3IP1-204ENST00000462122 APBA3O96018 575 aa15.5■□□□□ 0.07
TRAF3IP1-204ENST00000462122 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
TRAF3IP1-204ENST00000462122 AKAP4Q5JQC9 854 aa15.5■□□□□ 0.07
TRAF3IP1-204ENST00000462122 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
TRAF3IP1-204ENST00000462122 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
TRAF3IP1-204ENST00000462122 KCNQ2O43526 872 aa15.49■□□□□ 0.07
TRAF3IP1-204ENST00000462122 SYTL4Q96C24 671 aaPredicted RBP15.49■□□□□ 0.07
TRAF3IP1-204ENST00000462122 PRIM1P49642 420 aaKnown RBP15.48■□□□□ 0.07
TRAF3IP1-204ENST00000462122 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
TRAF3IP1-204ENST00000462122 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
TRAF3IP1-204ENST00000462122 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
TRAF3IP1-204ENST00000462122 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
TRAF3IP1-204ENST00000462122 MAP3K5Q99683 1374 aa15.47■□□□□ 0.07
TRAF3IP1-204ENST00000462122 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 PLSCR1O15162 318 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 RGPD3A6NKT7 1758 aaPredicted RBP15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 RGPD4Q7Z3J3 1758 aa15.46■□□□□ 0.07
TRAF3IP1-204ENST00000462122 GNAT3A8MTJ3 354 aa15.45■□□□□ 0.06
TRAF3IP1-204ENST00000462122 EN1Q05925 392 aaPredicted RBP15.45■□□□□ 0.06
TRAF3IP1-204ENST00000462122 MPRIPQ6WCQ1 1025 aa15.45■□□□□ 0.06
TRAF3IP1-204ENST00000462122 TMOD3Q9NYL9 352 aa15.45■□□□□ 0.06
TRAF3IP1-204ENST00000462122 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
TRAF3IP1-204ENST00000462122 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
TRAF3IP1-204ENST00000462122 ADAMTS8Q9UP79 889 aa15.44■□□□□ 0.06
TRAF3IP1-204ENST00000462122 BTAF1O14981 1849 aa15.44■□□□□ 0.06
TRAF3IP1-204ENST00000462122 CABP4P57796 275 aa15.43■□□□□ 0.06
TRAF3IP1-204ENST00000462122 RUNDC1Q96C34 613 aa15.43■□□□□ 0.06
TRAF3IP1-204ENST00000462122 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 MRC1P22897 1456 aa15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 RNMTO43148 476 aaKnown RBP15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 HTATSF1O43719 755 aaKnown RBP15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 PIGBQ92521 554 aa15.42■□□□□ 0.06
TRAF3IP1-204ENST00000462122 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
TRAF3IP1-204ENST00000462122 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
TRAF3IP1-204ENST00000462122 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
TRAF3IP1-204ENST00000462122 SCN11AQ9UI33 1791 aa15.41■□□□□ 0.06
TRAF3IP1-204ENST00000462122 ITGB4P16144 1822 aa15.4■□□□□ 0.06
TRAF3IP1-204ENST00000462122 KAT6BQ8WYB5 2073 aa15.4■□□□□ 0.06
TRAF3IP1-204ENST00000462122 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
TRAF3IP1-204ENST00000462122 CEMIPQ8WUJ3 1361 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 PALLDQ8WX93 1383 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 RREB1Q92766 1687 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
TRAF3IP1-204ENST00000462122 TXNRD1Q16881 649 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms