RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SPON1Q9HCB6 807 aa26.13■■□□□ 1.77
VARS-220ENST00000461874 STK32BQ9NY57 414 aa26.13■■□□□ 1.77
VARS-220ENST00000461874 KAT6BQ8WYB5 2073 aa26.12■■□□□ 1.77
VARS-220ENST00000461874 PPM1GO15355 546 aaPredicted RBP26.12■■□□□ 1.77
VARS-220ENST00000461874 TATP17735 454 aaPredicted RBP26.12■■□□□ 1.77
VARS-220ENST00000461874 PRIM1P49642 420 aaKnown RBP26.11■■□□□ 1.77
VARS-220ENST00000461874 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
VARS-220ENST00000461874 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
VARS-220ENST00000461874 PDGFDQ9GZP0 370 aaPredicted RBP26.1■■□□□ 1.77
VARS-220ENST00000461874 POLKQ9UBT6 870 aa26.1■■□□□ 1.77
VARS-220ENST00000461874 BTAF1O14981 1849 aa26.09■■□□□ 1.77
VARS-220ENST00000461874 SYTL4Q96C24 671 aaPredicted RBP26.08■■□□□ 1.77
VARS-220ENST00000461874 LRRC4BQ9NT99 713 aa26.07■■□□□ 1.76
VARS-220ENST00000461874 TNNT2P45379 298 aaPredicted RBP26.06■■□□□ 1.76
VARS-220ENST00000461874 SHANK3Q9BYB0 1731 aa26.05■■□□□ 1.76
VARS-220ENST00000461874 NSD2O96028 1365 aa26.05■■□□□ 1.76
VARS-220ENST00000461874 SLC27A3Q5K4L6 730 aa26.04■■□□□ 1.76
VARS-220ENST00000461874 PCDH11XQ9BZA7 1347 aa26.04■■□□□ 1.76
VARS-220ENST00000461874 PCDH11YQ9BZA8 1340 aa26.04■■□□□ 1.76
VARS-220ENST00000461874 NCAPD2Q15021 1401 aa26.04■■□□□ 1.76
VARS-220ENST00000461874 ANKRD26Q9UPS8 1709 aa26.03■■□□□ 1.76
VARS-220ENST00000461874 CASZ1Q86V15 1759 aa26.03■■□□□ 1.76
VARS-220ENST00000461874 EYA1Q99502 592 aa26.03■■□□□ 1.76
VARS-220ENST00000461874 PPP1R1BQ9UD71 204 aaPredicted RBP26.03■■□□□ 1.76
VARS-220ENST00000461874 ZBTB7AO95365 584 aa26.02■■□□□ 1.76
VARS-220ENST00000461874 CYP27B1O15528 508 aa26.01■■□□□ 1.75
VARS-220ENST00000461874 MAP2P11137 1827 aaKnown RBP26.01■■□□□ 1.75
VARS-220ENST00000461874 PAPPAQ13219 1627 aa26■■□□□ 1.75
VARS-220ENST00000461874 ZNF827Q17R98 1081 aa26■■□□□ 1.75
VARS-220ENST00000461874 DOT1LQ8TEK3 1739 aa26■■□□□ 1.75
VARS-220ENST00000461874 EIF4A2Q14240 407 aaKnown RBP25.98■■□□□ 1.75
VARS-220ENST00000461874 AKT1S1Q96B36 256 aa25.98■■□□□ 1.75
VARS-220ENST00000461874 ATF5Q9Y2D1 282 aaPredicted RBP25.98■■□□□ 1.75
VARS-220ENST00000461874 KIF7Q2M1P5 1343 aa25.97■■□□□ 1.75
VARS-220ENST00000461874 PTGER2P43116 358 aa25.97■■□□□ 1.75
VARS-220ENST00000461874 KNSTRNQ9Y448 316 aa25.97■■□□□ 1.75
VARS-220ENST00000461874 KCNQ4P56696 695 aa25.96■■□□□ 1.75
VARS-220ENST00000461874 MORC1Q86VD1 984 aa25.96■■□□□ 1.75
VARS-220ENST00000461874 MTFR1LQ9H019 292 aa25.96■■□□□ 1.75
VARS-220ENST00000461874 SPG7Q9UQ90 795 aa25.96■■□□□ 1.75
VARS-220ENST00000461874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.95■■□□□ 1.74
VARS-220ENST00000461874 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
VARS-220ENST00000461874 CCNL1Q9UK58 526 aaPredicted RBP25.93■■□□□ 1.74
VARS-220ENST00000461874 MPRIPQ6WCQ1 1025 aa25.92■■□□□ 1.74
VARS-220ENST00000461874 PKD1L3Q7Z443 1732 aa25.91■■□□□ 1.74
VARS-220ENST00000461874 AMER1Q5JTC6 1135 aaPredicted RBP25.91■■□□□ 1.74
VARS-220ENST00000461874 SGIP1Q9BQI5 828 aa25.91■■□□□ 1.74
VARS-220ENST00000461874 IGSF1Q8N6C5 1336 aa25.89■■□□□ 1.74
VARS-220ENST00000461874 LY75O60449 1722 aa25.89■■□□□ 1.74
VARS-220ENST00000461874 TFCP2L1Q9NZI6 479 aa25.89■■□□□ 1.74
VARS-220ENST00000461874 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
VARS-220ENST00000461874 PLEKHG2Q9H7P9 1386 aa25.87■■□□□ 1.73
VARS-220ENST00000461874 IFNL2Q8IZJ0 200 aa25.87■■□□□ 1.73
VARS-220ENST00000461874 PALLDQ8WX93 1383 aa25.86■■□□□ 1.73
VARS-220ENST00000461874 PHKG2P15735 406 aa25.86■■□□□ 1.73
VARS-220ENST00000461874 SLC16A10Q8TF71 515 aa25.86■■□□□ 1.73
VARS-220ENST00000461874 PIGBQ92521 554 aa25.86■■□□□ 1.73
VARS-220ENST00000461874 PER1O15534 1290 aaPredicted RBP25.85■■□□□ 1.73
VARS-220ENST00000461874 SMARCC1Q92922 1105 aaPredicted RBP25.85■■□□□ 1.73
VARS-220ENST00000461874 TOGARAM1Q9Y4F4 1720 aa25.83■■□□□ 1.73
VARS-220ENST00000461874 HMGB2P26583 209 aaKnown RBP25.82■■□□□ 1.72
VARS-220ENST00000461874 ARXQ96QS3 562 aa25.82■■□□□ 1.72
VARS-220ENST00000461874 FHDC1Q9C0D6 1143 aaPredicted RBP25.81■■□□□ 1.72
VARS-220ENST00000461874 QSER1Q2KHR3 1735 aa25.8■■□□□ 1.72
VARS-220ENST00000461874 PLEKHO1Q53GL0 409 aaPredicted RBP25.8■■□□□ 1.72
VARS-220ENST00000461874 SYT17Q9BSW7 474 aa25.8■■□□□ 1.72
VARS-220ENST00000461874 TMOD3Q9NYL9 352 aa25.8■■□□□ 1.72
VARS-220ENST00000461874 DCAF8L1A6NGE4 600 aa25.79■■□□□ 1.72
VARS-220ENST00000461874 IL13P35225 146 aa25.79■■□□□ 1.72
VARS-220ENST00000461874 AEBP1Q8IUX7 1158 aa25.79■■□□□ 1.72
VARS-220ENST00000461874 AMOTQ4VCS5 1084 aa25.78■■□□□ 1.72
VARS-220ENST00000461874 ITGB4P16144 1822 aa25.78■■□□□ 1.72
VARS-220ENST00000461874 COL23A1Q86Y22 540 aaPredicted RBP25.77■■□□□ 1.72
VARS-220ENST00000461874 MTHFSP49914 203 aa25.76■■□□□ 1.71
VARS-220ENST00000461874 CC2D1BQ5T0F9 858 aaKnown RBP25.76■■□□□ 1.71
VARS-220ENST00000461874 SULT6B1Q6IMI4 303 aa25.76■■□□□ 1.71
VARS-220ENST00000461874 ASAP1Q9ULH1 1129 aa25.76■■□□□ 1.71
VARS-220ENST00000461874 HSP90AB1P08238 724 aaKnown RBP25.75■■□□□ 1.71
VARS-220ENST00000461874 POLD1P28340 1107 aa25.75■■□□□ 1.71
VARS-220ENST00000461874 ZNF530Q6P9A1 599 aaPredicted RBP25.75■■□□□ 1.71
VARS-220ENST00000461874 DCAF5Q96JK2 942 aa25.75■■□□□ 1.71
VARS-220ENST00000461874 TUBGCP6Q96RT7 1819 aa25.74■■□□□ 1.71
VARS-220ENST00000461874 LOC102724428A0A0B4J2F2 783 aa25.74■■□□□ 1.71
VARS-220ENST00000461874 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
VARS-220ENST00000461874 MSH5O43196 834 aa25.74■■□□□ 1.71
VARS-220ENST00000461874 SIK1P57059 783 aa25.74■■□□□ 1.71
VARS-220ENST00000461874 KDRP35968 1356 aa25.73■■□□□ 1.71
VARS-220ENST00000461874 MAP3K5Q99683 1374 aa25.73■■□□□ 1.71
VARS-220ENST00000461874 C5P01031 1676 aa25.72■■□□□ 1.71
VARS-220ENST00000461874 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
VARS-220ENST00000461874 ATG3Q9NT62 314 aa25.72■■□□□ 1.71
VARS-220ENST00000461874 NPC1L1Q9UHC9 1359 aa25.71■■□□□ 1.71
VARS-220ENST00000461874 AK7Q96M32 723 aa25.7■■□□□ 1.7
VARS-220ENST00000461874 C1orf141Q5JVX7 400 aa25.69■■□□□ 1.7
VARS-220ENST00000461874 COL24A1Q17RW2 1714 aa25.68■■□□□ 1.7
VARS-220ENST00000461874 TAF1LQ8IZX4 1826 aa25.68■■□□□ 1.7
VARS-220ENST00000461874 LINC00116Q8NCU8 138 aa25.68■■□□□ 1.7
VARS-220ENST00000461874 KDM6AO15550 1401 aaPredicted RBP25.68■■□□□ 1.7
VARS-220ENST00000461874 C4BP0C0L5 1744 aa25.67■■□□□ 1.7
VARS-220ENST00000461874 ATP6V1AP38606 617 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms