RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
LDB1-203ENST00000461873 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
LDB1-203ENST00000461873 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
LDB1-203ENST00000461873 INSRP06213 1382 aa12.15□□□□□ -0.46
LDB1-203ENST00000461873 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
LDB1-203ENST00000461873 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
LDB1-203ENST00000461873 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
LDB1-203ENST00000461873 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
LDB1-203ENST00000461873 PCDH11XQ9BZA7 1347 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 PCDH11YQ9BZA8 1340 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
LDB1-203ENST00000461873 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
LDB1-203ENST00000461873 PANK3Q9H999 370 aa12.12□□□□□ -0.47
LDB1-203ENST00000461873 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
LDB1-203ENST00000461873 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
LDB1-203ENST00000461873 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
LDB1-203ENST00000461873 ZBTB7AO95365 584 aa12.11□□□□□ -0.47
LDB1-203ENST00000461873 MORC1Q86VD1 984 aa12.11□□□□□ -0.47
LDB1-203ENST00000461873 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
LDB1-203ENST00000461873 MYOM1P52179 1685 aa12.1□□□□□ -0.47
LDB1-203ENST00000461873 BTAF1O14981 1849 aa12.1□□□□□ -0.47
LDB1-203ENST00000461873 PROM2Q8N271 834 aa12.1□□□□□ -0.47
LDB1-203ENST00000461873 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
LDB1-203ENST00000461873 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
LDB1-203ENST00000461873 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
LDB1-203ENST00000461873 WASHC2AQ641Q2 1341 aa12.1□□□□□ -0.47
LDB1-203ENST00000461873 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
LDB1-203ENST00000461873 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
LDB1-203ENST00000461873 NSD2O96028 1365 aa12.08□□□□□ -0.48
LDB1-203ENST00000461873 POLD1P28340 1107 aa12.08□□□□□ -0.48
LDB1-203ENST00000461873 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
LDB1-203ENST00000461873 MEGF6O75095 1541 aa12.07□□□□□ -0.48
LDB1-203ENST00000461873 SMARCC1Q92922 1105 aaPredicted RBP12.07□□□□□ -0.48
LDB1-203ENST00000461873 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
LDB1-203ENST00000461873 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
LDB1-203ENST00000461873 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
LDB1-203ENST00000461873 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
LDB1-203ENST00000461873 SLC16A10Q8TF71 515 aa12.05□□□□□ -0.48
LDB1-203ENST00000461873 EYA1Q99502 592 aa12.05□□□□□ -0.48
LDB1-203ENST00000461873 ANKRD26Q9UPS8 1709 aa12.05□□□□□ -0.48
LDB1-203ENST00000461873 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
LDB1-203ENST00000461873 PLEKHO1Q53GL0 409 aaPredicted RBP12.04□□□□□ -0.48
LDB1-203ENST00000461873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
LDB1-203ENST00000461873 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
LDB1-203ENST00000461873 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
LDB1-203ENST00000461873 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
LDB1-203ENST00000461873 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
LDB1-203ENST00000461873 AK7Q96M32 723 aa12.03□□□□□ -0.48
LDB1-203ENST00000461873 ARXQ96QS3 562 aa12.03□□□□□ -0.48
LDB1-203ENST00000461873 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
LDB1-203ENST00000461873 KCNQ4P56696 695 aa12.02□□□□□ -0.49
LDB1-203ENST00000461873 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
LDB1-203ENST00000461873 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.49
LDB1-203ENST00000461873 PDGFDQ9GZP0 370 aaPredicted RBP12.02□□□□□ -0.49
LDB1-203ENST00000461873 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
LDB1-203ENST00000461873 CYP27B1O15528 508 aa12.01□□□□□ -0.49
LDB1-203ENST00000461873 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
LDB1-203ENST00000461873 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
LDB1-203ENST00000461873 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
LDB1-203ENST00000461873 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
LDB1-203ENST00000461873 YY1P25490 414 aa12□□□□□ -0.49
LDB1-203ENST00000461873 FHDC1Q9C0D6 1143 aaPredicted RBP12□□□□□ -0.49
LDB1-203ENST00000461873 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
LDB1-203ENST00000461873 PHKG2P15735 406 aa11.99□□□□□ -0.49
LDB1-203ENST00000461873 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
LDB1-203ENST00000461873 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
LDB1-203ENST00000461873 LY75O60449 1722 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 PTGER2P43116 358 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 MTHFSP49914 203 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 CABP4P57796 275 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
LDB1-203ENST00000461873 GPR162Q16538 588 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 SULT6B1Q6IMI4 303 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
LDB1-203ENST00000461873 PIGBQ92521 554 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
LDB1-203ENST00000461873 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
LDB1-203ENST00000461873 ITGB4P16144 1822 aa11.97□□□□□ -0.49
LDB1-203ENST00000461873 LOC102724428A0A0B4J2F2 783 aa11.96□□□□□ -0.49
LDB1-203ENST00000461873 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.49
LDB1-203ENST00000461873 PHF14O94880 888 aa11.96□□□□□ -0.49
LDB1-203ENST00000461873 SIK1P57059 783 aa11.96□□□□□ -0.49
LDB1-203ENST00000461873 PAPPAQ13219 1627 aa11.96□□□□□ -0.5
LDB1-203ENST00000461873 QSER1Q2KHR3 1735 aa11.95□□□□□ -0.5
LDB1-203ENST00000461873 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
LDB1-203ENST00000461873 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
LDB1-203ENST00000461873 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
LDB1-203ENST00000461873 C5P01031 1676 aa11.94□□□□□ -0.5
LDB1-203ENST00000461873 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
LDB1-203ENST00000461873 COL23A1Q86Y22 540 aaPredicted RBP11.94□□□□□ -0.5
LDB1-203ENST00000461873 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms