RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 ST18O60284 1047 aa14.14□□□□□ -0.15
CDK5RAP1-207ENST00000461710 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP1-207ENST00000461710 ALKQ9UM73 1620 aa14.14□□□□□ -0.15
CDK5RAP1-207ENST00000461710 DIP2CQ9Y2E4 1556 aa14.14□□□□□ -0.15
CDK5RAP1-207ENST00000461710 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
CDK5RAP1-207ENST00000461710 RGS12O14924 1447 aa14.13□□□□□ -0.15
CDK5RAP1-207ENST00000461710 RBM27Q9P2N5 1060 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP1-207ENST00000461710 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
CDK5RAP1-207ENST00000461710 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
CDK5RAP1-207ENST00000461710 CEP85Q6P2H3 762 aa14.12□□□□□ -0.15
CDK5RAP1-207ENST00000461710 CASC1Q6TDU7 716 aa14.12□□□□□ -0.15
CDK5RAP1-207ENST00000461710 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP1-207ENST00000461710 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP1-207ENST00000461710 TMEM63CQ9P1W3 806 aa14.11□□□□□ -0.15
CDK5RAP1-207ENST00000461710 REC8O95072 547 aa14.11□□□□□ -0.15
CDK5RAP1-207ENST00000461710 LRSAM1Q6UWE0 723 aa14.11□□□□□ -0.15
CDK5RAP1-207ENST00000461710 R3HCC1Q9Y3T6 440 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP1-207ENST00000461710 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP1-207ENST00000461710 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
CDK5RAP1-207ENST00000461710 RTL1A6NKG5 1358 aa14.1□□□□□ -0.15
CDK5RAP1-207ENST00000461710 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
CDK5RAP1-207ENST00000461710 CHAMP1Q96JM3 812 aa14.1□□□□□ -0.15
CDK5RAP1-207ENST00000461710 MSH6P52701 1360 aa14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 AATKQ6ZMQ8 1374 aa14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 XPCQ01831 940 aaPredicted RBP14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 NSFL1CQ9UNZ2 370 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
CDK5RAP1-207ENST00000461710 SYCE3A1L190 88 aa14.08□□□□□ -0.15
CDK5RAP1-207ENST00000461710 ERC2O15083 957 aa14.08□□□□□ -0.15
CDK5RAP1-207ENST00000461710 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MCM5P33992 734 aa14.08□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP1-207ENST00000461710 NME9Q86XW9 330 aa14.08□□□□□ -0.16
CDK5RAP1-207ENST00000461710 APBB1O00213 710 aa14.08□□□□□ -0.16
CDK5RAP1-207ENST00000461710 KRT24Q2M2I5 525 aa14.07□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MEIS3Q99687 375 aa14.07□□□□□ -0.16
CDK5RAP1-207ENST00000461710 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MBD3O95983 291 aa14.06□□□□□ -0.16
CDK5RAP1-207ENST00000461710 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
CDK5RAP1-207ENST00000461710 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
CDK5RAP1-207ENST00000461710 OSBPL3Q9H4L5 887 aa14.06□□□□□ -0.16
CDK5RAP1-207ENST00000461710 CCDC39Q9UFE4 941 aa14.06□□□□□ -0.16
CDK5RAP1-207ENST00000461710 NEO1Q92859 1461 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 UQCRHP07919 91 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MAP7D2Q96T17 732 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 PTPRCP08575 1304 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RIMBP3CA6NJZ7 1639 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RIMBP3BA6NNM3 1639 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RIMBP3Q9UFD9 1639 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 BRD1O95696 1058 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 HAP1P54257 671 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 FAM13BQ9NYF5 915 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 TUBGCP6Q96RT7 1819 aa14.05□□□□□ -0.16
CDK5RAP1-207ENST00000461710 CHL1O00533 1208 aa14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 NEK4P51957 841 aa14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 FOXD4L5Q5VV16 416 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 FOXD4L4Q8WXT5 416 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 PDE1AP54750 535 aa14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
CDK5RAP1-207ENST00000461710 CUL4AQ13619 759 aa14.03□□□□□ -0.16
CDK5RAP1-207ENST00000461710 CPS1P31327 1500 aa14.03□□□□□ -0.16
CDK5RAP1-207ENST00000461710 NRKQ7Z2Y5 1582 aa14.03□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MON2Q7Z3U7 1717 aa14.03□□□□□ -0.16
CDK5RAP1-207ENST00000461710 MCM2P49736 904 aa14.03□□□□□ -0.16
CDK5RAP1-207ENST00000461710 RNF214Q8ND24 703 aa14.02□□□□□ -0.16
CDK5RAP1-207ENST00000461710 COG3Q96JB2 828 aa14.02□□□□□ -0.16
CDK5RAP1-207ENST00000461710 HMMRO75330 724 aa14.02□□□□□ -0.17
CDK5RAP1-207ENST00000461710 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP1-207ENST00000461710 DYNC1I1O14576 645 aa14.01□□□□□ -0.17
CDK5RAP1-207ENST00000461710 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
CDK5RAP1-207ENST00000461710 SALL3Q9BXA9 1300 aa14.01□□□□□ -0.17
CDK5RAP1-207ENST00000461710 C3P01024 1663 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 ESYT1Q9BSJ8 1104 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 TSPY26PQ9H489 355 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 MCM10Q7L590 875 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 PALD1Q9ULE6 856 aa14□□□□□ -0.17
CDK5RAP1-207ENST00000461710 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
CDK5RAP1-207ENST00000461710 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
CDK5RAP1-207ENST00000461710 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
CDK5RAP1-207ENST00000461710 ANAPC15P60006 121 aa13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 TSHZ3Q63HK5 1081 aa13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 SYAP1Q96A49 352 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 EIF4A2Q14240 407 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 MTERF4Q7Z6M4 381 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 MCCP23508 829 aa13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK5RAP1-207ENST00000461710 CRB1P82279 1406 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms