RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
UBA3-204ENST00000461522 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
UBA3-204ENST00000461522 SLC35F4A4IF30 521 aa9.59□□□□□ -0.87
UBA3-204ENST00000461522 RNF144AP50876 292 aaPredicted RBP9.59□□□□□ -0.87
UBA3-204ENST00000461522 INSM1Q01101 510 aaPredicted RBP9.59□□□□□ -0.87
UBA3-204ENST00000461522 WASHC4Q2M389 1173 aa9.59□□□□□ -0.87
UBA3-204ENST00000461522 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
UBA3-204ENST00000461522 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
UBA3-204ENST00000461522 CYP2U1Q7Z449 544 aa9.58□□□□□ -0.88
UBA3-204ENST00000461522 CCDC155Q8N6L0 562 aa9.58□□□□□ -0.88
UBA3-204ENST00000461522 A0A1W2PRU2 124 aa9.57□□□□□ -0.88
UBA3-204ENST00000461522 CDCA7Q9BWT1 371 aaPredicted RBP9.57□□□□□ -0.88
UBA3-204ENST00000461522 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
UBA3-204ENST00000461522 GPC1P35052 558 aa9.56□□□□□ -0.88
UBA3-204ENST00000461522 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
UBA3-204ENST00000461522 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
UBA3-204ENST00000461522 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
UBA3-204ENST00000461522 MEN1O00255 615 aa9.55□□□□□ -0.88
UBA3-204ENST00000461522 CLN3Q13286 438 aa9.55□□□□□ -0.88
UBA3-204ENST00000461522 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
UBA3-204ENST00000461522 SLFNL1Q499Z3 407 aa9.55□□□□□ -0.88
UBA3-204ENST00000461522 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
UBA3-204ENST00000461522 SOX11P35716 441 aa9.54□□□□□ -0.88
UBA3-204ENST00000461522 FLIIQ13045 1269 aa9.54□□□□□ -0.88
UBA3-204ENST00000461522 NANOS1Q8WY41 292 aaKnown RBP9.54□□□□□ -0.88
UBA3-204ENST00000461522 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
UBA3-204ENST00000461522 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
UBA3-204ENST00000461522 RNF135Q8IUD6 432 aa9.53□□□□□ -0.88
UBA3-204ENST00000461522 POM121Q96HA1 1249 aa9.53□□□□□ -0.88
UBA3-204ENST00000461522 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
UBA3-204ENST00000461522 DOLKQ9UPQ8 538 aa9.53□□□□□ -0.88
UBA3-204ENST00000461522 GNRH1P01148 92 aa9.52□□□□□ -0.89
UBA3-204ENST00000461522 ITGA6P23229 1130 aa9.52□□□□□ -0.89
UBA3-204ENST00000461522 PRICKLE2Q7Z3G6 844 aa9.52□□□□□ -0.89
UBA3-204ENST00000461522 NLRP3Q96P20 1036 aa9.52□□□□□ -0.89
UBA3-204ENST00000461522 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
UBA3-204ENST00000461522 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
UBA3-204ENST00000461522 GPR161Q8N6U8 529 aaKnown RBP9.51□□□□□ -0.89
UBA3-204ENST00000461522 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
UBA3-204ENST00000461522 USP4Q13107 963 aa9.5□□□□□ -0.89
UBA3-204ENST00000461522 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
UBA3-204ENST00000461522 IL2RAP01589 272 aa9.49□□□□□ -0.89
UBA3-204ENST00000461522 RHOQP17081 205 aa9.49□□□□□ -0.89
UBA3-204ENST00000461522 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
UBA3-204ENST00000461522 RAD21O60216 631 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
UBA3-204ENST00000461522 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 SLC27A3Q5K4L6 730 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 ZSCAN1Q8NBB4 408 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 ALG2Q9H553 416 aa9.48□□□□□ -0.89
UBA3-204ENST00000461522 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 KRT76Q01546 638 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 PLPP7Q8NBV4 271 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
UBA3-204ENST00000461522 POU4F2Q12837 409 aa9.46□□□□□ -0.9
UBA3-204ENST00000461522 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
UBA3-204ENST00000461522 SV2AQ7L0J3 742 aa9.46□□□□□ -0.9
UBA3-204ENST00000461522 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
UBA3-204ENST00000461522 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
UBA3-204ENST00000461522 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
UBA3-204ENST00000461522 CDC14CA4D256 554 aa9.45□□□□□ -0.9
UBA3-204ENST00000461522 PIK3CDO00329 1044 aa9.45□□□□□ -0.9
UBA3-204ENST00000461522 CENPCQ03188 943 aa9.45□□□□□ -0.9
UBA3-204ENST00000461522 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
UBA3-204ENST00000461522 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
UBA3-204ENST00000461522 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
UBA3-204ENST00000461522 COL25A1Q9BXS0 654 aaPredicted RBP9.44□□□□□ -0.9
UBA3-204ENST00000461522 FHDC1Q9C0D6 1143 aaPredicted RBP9.44□□□□□ -0.9
UBA3-204ENST00000461522 ETNK1Q9HBU6 452 aa9.44□□□□□ -0.9
UBA3-204ENST00000461522 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
UBA3-204ENST00000461522 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
UBA3-204ENST00000461522 RNFT1Q5M7Z0 435 aa9.43□□□□□ -0.9
UBA3-204ENST00000461522 WASLO00401 505 aaPredicted RBP9.42□□□□□ -0.9
UBA3-204ENST00000461522 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
UBA3-204ENST00000461522 NFATC2IPQ8NCF5 419 aa9.42□□□□□ -0.9
UBA3-204ENST00000461522 CNTNAP3BQ96NU0 1288 aa9.42□□□□□ -0.9
UBA3-204ENST00000461522 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
UBA3-204ENST00000461522 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 SCNN1DP51172 638 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 GMCL1Q96IK5 515 aa9.41□□□□□ -0.9
UBA3-204ENST00000461522 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
UBA3-204ENST00000461522 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
UBA3-204ENST00000461522 TIMMDC1Q9NPL8 285 aa9.4□□□□□ -0.9
UBA3-204ENST00000461522 SKIP12755 728 aa9.39□□□□□ -0.91
UBA3-204ENST00000461522 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
UBA3-204ENST00000461522 INHAP05111 366 aa9.38□□□□□ -0.91
UBA3-204ENST00000461522 GDF10P55107 478 aa9.38□□□□□ -0.91
UBA3-204ENST00000461522 DBN1Q16643 649 aa9.38□□□□□ -0.91
UBA3-204ENST00000461522 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
UBA3-204ENST00000461522 GAS2L1Q99501 681 aaPredicted RBP9.38□□□□□ -0.91
UBA3-204ENST00000461522 H7C1W4 665 aa9.37□□□□□ -0.91
UBA3-204ENST00000461522 GAS6Q14393 721 aa9.37□□□□□ -0.91
UBA3-204ENST00000461522 TLR1Q15399 786 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms