RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 DCAF5Q96JK2 942 aa7.88□□□□□ -1.15
CLK1-206ENST00000461326 XP32Q5T750 250 aa7.87□□□□□ -1.15
CLK1-206ENST00000461326 GALNT6Q8NCL4 622 aa7.87□□□□□ -1.15
CLK1-206ENST00000461326 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
CLK1-206ENST00000461326 CUEDC1Q9NWM3 386 aaPredicted RBP7.87□□□□□ -1.15
CLK1-206ENST00000461326 IGF1RP08069 1367 aa7.86□□□□□ -1.15
CLK1-206ENST00000461326 CNTNAP5Q8WYK1 1306 aa7.86□□□□□ -1.15
CLK1-206ENST00000461326 BCRP11274 1271 aa7.86□□□□□ -1.15
CLK1-206ENST00000461326 DZIP3Q86Y13 1208 aaKnown RBP7.86□□□□□ -1.15
CLK1-206ENST00000461326 TRIM22Q8IYM9 498 aa7.86□□□□□ -1.15
CLK1-206ENST00000461326 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
CLK1-206ENST00000461326 ERVH48-1M5A8F1 160 aa7.85□□□□□ -1.15
CLK1-206ENST00000461326 LILRA1O75019 489 aa7.85□□□□□ -1.15
CLK1-206ENST00000461326 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
CLK1-206ENST00000461326 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
CLK1-206ENST00000461326 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
CLK1-206ENST00000461326 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
CLK1-206ENST00000461326 H7C1W4 665 aa7.84□□□□□ -1.15
CLK1-206ENST00000461326 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
CLK1-206ENST00000461326 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
CLK1-206ENST00000461326 GPR25O00155 361 aa7.83□□□□□ -1.16
CLK1-206ENST00000461326 RHOQP17081 205 aa7.83□□□□□ -1.16
CLK1-206ENST00000461326 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
CLK1-206ENST00000461326 RIPOR1Q6ZS17 1223 aa7.83□□□□□ -1.16
CLK1-206ENST00000461326 KDF1Q8NAX2 398 aaPredicted RBP7.83□□□□□ -1.16
CLK1-206ENST00000461326 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
CLK1-206ENST00000461326 GPC1P35052 558 aa7.82□□□□□ -1.16
CLK1-206ENST00000461326 SEPT12Q8IYM1 358 aa7.82□□□□□ -1.16
CLK1-206ENST00000461326 LRRC4BQ9NT99 713 aa7.82□□□□□ -1.16
CLK1-206ENST00000461326 ESPNB1AK53 854 aa7.81□□□□□ -1.16
CLK1-206ENST00000461326 CYLDQ9NQC7 956 aa7.81□□□□□ -1.16
CLK1-206ENST00000461326 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
CLK1-206ENST00000461326 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 PROCP04070 461 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 ITGB2P05107 769 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 DBN1Q16643 649 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 GTPBP3Q969Y2 492 aaKnown RBP7.8□□□□□ -1.16
CLK1-206ENST00000461326 ACDQ96AP0 544 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 DYRK1BQ9Y463 629 aa7.8□□□□□ -1.16
CLK1-206ENST00000461326 K7ELQ4 463 aaPredicted RBP7.79□□□□□ -1.16
CLK1-206ENST00000461326 MX2P20592 715 aa7.79□□□□□ -1.16
CLK1-206ENST00000461326 SKIV2LQ15477 1246 aaKnown RBP7.79□□□□□ -1.16
CLK1-206ENST00000461326 MEN1O00255 615 aa7.78□□□□□ -1.16
CLK1-206ENST00000461326 AP1G2O75843 785 aa7.78□□□□□ -1.16
CLK1-206ENST00000461326 GAS2L1Q99501 681 aaPredicted RBP7.78□□□□□ -1.16
CLK1-206ENST00000461326 SLC27A3Q5K4L6 730 aa7.77□□□□□ -1.17
CLK1-206ENST00000461326 OIP5O43482 229 aa7.76□□□□□ -1.17
CLK1-206ENST00000461326 MAP2K3P46734 347 aa7.76□□□□□ -1.17
CLK1-206ENST00000461326 SH3D19Q5HYK7 790 aa7.76□□□□□ -1.17
CLK1-206ENST00000461326 ALYREFQ86V81 257 aaKnown RBP7.76□□□□□ -1.17
CLK1-206ENST00000461326 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
CLK1-206ENST00000461326 NLRP3Q96P20 1036 aa7.76□□□□□ -1.17
CLK1-206ENST00000461326 EPS8L1Q8TE68 723 aa7.75□□□□□ -1.17
CLK1-206ENST00000461326 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CLK1-206ENST00000461326 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
CLK1-206ENST00000461326 POU4F2Q12837 409 aa7.74□□□□□ -1.17
CLK1-206ENST00000461326 OXCT2Q9BYC2 517 aaPredicted RBP7.74□□□□□ -1.17
CLK1-206ENST00000461326 NUCKS1Q9H1E3 243 aaKnown RBP7.74□□□□□ -1.17
CLK1-206ENST00000461326 KDM4CQ9H3R0 1056 aa7.74□□□□□ -1.17
CLK1-206ENST00000461326 MKL2Q9ULH7 1088 aa7.74□□□□□ -1.17
CLK1-206ENST00000461326 USP17L8P0C7I0 530 aa7.73□□□□□ -1.17
CLK1-206ENST00000461326 BAG6P46379 1132 aa7.73□□□□□ -1.17
CLK1-206ENST00000461326 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
CLK1-206ENST00000461326 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
CLK1-206ENST00000461326 FBXO31Q5XUX0 539 aaPredicted RBP7.72□□□□□ -1.17
CLK1-206ENST00000461326 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
CLK1-206ENST00000461326 NBPF10Q6P3W6 841 aaKnown RBP7.72□□□□□ -1.17
CLK1-206ENST00000461326 NBPF15Q8N660 670 aa7.72□□□□□ -1.17
CLK1-206ENST00000461326 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
CLK1-206ENST00000461326 GPBP1L1Q9HC44 474 aaPredicted RBP7.72□□□□□ -1.17
CLK1-206ENST00000461326 F11P03951 625 aa7.71□□□□□ -1.18
CLK1-206ENST00000461326 CYP2U1Q7Z449 544 aa7.71□□□□□ -1.18
CLK1-206ENST00000461326 TIMMDC1Q9NPL8 285 aa7.71□□□□□ -1.18
CLK1-206ENST00000461326 TIMELESSQ9UNS1 1208 aa7.71□□□□□ -1.18
CLK1-206ENST00000461326 PHF24Q9UPV7 400 aa7.71□□□□□ -1.18
CLK1-206ENST00000461326 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 SPATA31C2B4DYI2 1134 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
CLK1-206ENST00000461326 ERVK-9P63128 1117 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 SNRPNP63162 240 aaKnown RBP7.7□□□□□ -1.18
CLK1-206ENST00000461326 CLN3Q13286 438 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 TAS1R3Q7RTX0 852 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 CFHR5Q9BXR6 569 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 GRIP2Q9C0E4 1043 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 RRAGCQ9HB90 399 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 GDF2Q9UK05 429 aaPredicted RBP7.7□□□□□ -1.18
CLK1-206ENST00000461326 PCDHB9Q9Y5E1 797 aa7.7□□□□□ -1.18
CLK1-206ENST00000461326 WASLO00401 505 aaPredicted RBP7.69□□□□□ -1.18
CLK1-206ENST00000461326 PIK3R2O00459 728 aa7.69□□□□□ -1.18
CLK1-206ENST00000461326 Q8N3U1 123 aa7.69□□□□□ -1.18
CLK1-206ENST00000461326 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
CLK1-206ENST00000461326 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
CLK1-206ENST00000461326 FURINP09958 794 aa7.67□□□□□ -1.18
CLK1-206ENST00000461326 KLRG1Q96E93 195 aa7.67□□□□□ -1.18
CLK1-206ENST00000461326 SHISA8B8ZZ34 492 aa7.66□□□□□ -1.18
CLK1-206ENST00000461326 C14orf37Q86TY3 774 aa7.66□□□□□ -1.18
CLK1-206ENST00000461326 GOLGA6L1Q8N7Z2 621 aa7.66□□□□□ -1.18
CLK1-206ENST00000461326 EDARADDQ8WWZ3 215 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms