RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
ECHDC1-212ENST00000461239 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
ECHDC1-212ENST00000461239 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 C9orf84Q5VXU9 1444 aa12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 ANKRD13DQ6ZTN6 518 aa12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 THAP11Q96EK4 314 aa12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 USB1Q9BQ65 265 aaKnown RBP12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 ALG2Q9H553 416 aa12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
ECHDC1-212ENST00000461239 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
ECHDC1-212ENST00000461239 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
ECHDC1-212ENST00000461239 DAPK1P53355 1430 aa12.22□□□□□ -0.45
ECHDC1-212ENST00000461239 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
ECHDC1-212ENST00000461239 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
ECHDC1-212ENST00000461239 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
ECHDC1-212ENST00000461239 TSPY4P0CV99 314 aa12.21□□□□□ -0.45
ECHDC1-212ENST00000461239 TSPY10P0CW01 314 aa12.21□□□□□ -0.45
ECHDC1-212ENST00000461239 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.45
ECHDC1-212ENST00000461239 WNT2BQ93097 391 aa12.21□□□□□ -0.45
ECHDC1-212ENST00000461239 PCDHB3Q9Y5E6 796 aa12.21□□□□□ -0.45
ECHDC1-212ENST00000461239 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
ECHDC1-212ENST00000461239 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
ECHDC1-212ENST00000461239 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 RETREG2Q8NC44 543 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 PLXNC1O60486 1568 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 AGLP35573 1532 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 A2MP01023 1474 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
ECHDC1-212ENST00000461239 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
ECHDC1-212ENST00000461239 F12P00748 615 aaPredicted RBP12.19□□□□□ -0.46
ECHDC1-212ENST00000461239 CFAP70Q5T0N1 1121 aa12.19□□□□□ -0.46
ECHDC1-212ENST00000461239 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
ECHDC1-212ENST00000461239 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
ECHDC1-212ENST00000461239 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 NR1I2O75469 434 aa12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 FMNL1O95466 1100 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 MLECQ14165 292 aa12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 CHIC2Q9UKJ5 165 aa12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 ADGBQ8N7X0 1667 aa12.18□□□□□ -0.46
ECHDC1-212ENST00000461239 SOX11P35716 441 aa12.17□□□□□ -0.46
ECHDC1-212ENST00000461239 UCN2Q96RP3 112 aa12.17□□□□□ -0.46
ECHDC1-212ENST00000461239 PPP1R12CQ9BZL4 782 aa12.17□□□□□ -0.46
ECHDC1-212ENST00000461239 JUNDP17535 347 aa12.16□□□□□ -0.46
ECHDC1-212ENST00000461239 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
ECHDC1-212ENST00000461239 NCOA1Q15788 1441 aa12.15□□□□□ -0.46
ECHDC1-212ENST00000461239 SRPK2P78362 688 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-212ENST00000461239 PTPRNQ16849 979 aa12.15□□□□□ -0.46
ECHDC1-212ENST00000461239 PBXIP1Q96AQ6 731 aa12.15□□□□□ -0.46
ECHDC1-212ENST00000461239 RRP7BPQ9NSQ0 103 aa12.15□□□□□ -0.46
ECHDC1-212ENST00000461239 MADDQ8WXG6 1647 aa12.15□□□□□ -0.47
ECHDC1-212ENST00000461239 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
ECHDC1-212ENST00000461239 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
ECHDC1-212ENST00000461239 MAP10Q9P2G4 905 aa12.14□□□□□ -0.47
ECHDC1-212ENST00000461239 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
ECHDC1-212ENST00000461239 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
ECHDC1-212ENST00000461239 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
ECHDC1-212ENST00000461239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
ECHDC1-212ENST00000461239 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
ECHDC1-212ENST00000461239 NR1H3Q13133 447 aa12.12□□□□□ -0.47
ECHDC1-212ENST00000461239 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
ECHDC1-212ENST00000461239 PTPRMP28827 1452 aa12.12□□□□□ -0.47
ECHDC1-212ENST00000461239 ANKRD30AQ9BXX3 1397 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 KIF3BO15066 747 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 RFX1P22670 979 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 ITGAEP38570 1179 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
ECHDC1-212ENST00000461239 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
ECHDC1-212ENST00000461239 GGT6Q6P531 493 aa12.1□□□□□ -0.47
ECHDC1-212ENST00000461239 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
ECHDC1-212ENST00000461239 ROCK1Q13464 1354 aa12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 EIF4G2P78344 907 aaKnown RBP eCLIP12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 SPSB2Q99619 263 aa12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 RIMS1Q86UR5 1692 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-212ENST00000461239 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 MMP16P51512 607 aa12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 TFIP11Q9UBB9 837 aaKnown RBP12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 ERBINQ96RT1 1412 aa12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
ECHDC1-212ENST00000461239 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
ECHDC1-212ENST00000461239 COPS2P61201 443 aa12.07□□□□□ -0.48
ECHDC1-212ENST00000461239 PRDM9Q9NQV7 894 aa12.07□□□□□ -0.48
ECHDC1-212ENST00000461239 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
ECHDC1-212ENST00000461239 CCNYL3P0C7X3 344 aa12.06□□□□□ -0.48
ECHDC1-212ENST00000461239 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-212ENST00000461239 MAFBQ9Y5Q3 323 aaPredicted RBP12.06□□□□□ -0.48
ECHDC1-212ENST00000461239 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
ECHDC1-212ENST00000461239 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 CTHP32929 405 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
ECHDC1-212ENST00000461239 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms